RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 DAND5Q8N907 189 aa7.15□□□□□ -1.26
NOD1-208ENST00000489614 ADAMTSL4-AS1Q5T5F5 129 aa7.15□□□□□ -1.27
NOD1-208ENST00000489614 A0A0J9YXY3 114 aa7.14□□□□□ -1.27
NOD1-208ENST00000489614 CD28P10747 220 aa7.14□□□□□ -1.27
NOD1-208ENST00000489614 COL6A5A8TX70 2615 aa7.14□□□□□ -1.27
NOD1-208ENST00000489614 BAALC-AS2P0C853 105 aa7.14□□□□□ -1.27
NOD1-208ENST00000489614 HOXD3P31249 432 aaPredicted RBP7.14□□□□□ -1.27
NOD1-208ENST00000489614 SLC50A1Q9BRV3 221 aa7.14□□□□□ -1.27
NOD1-208ENST00000489614 LINC00474Q9P2X8 69 aa7.14□□□□□ -1.27
NOD1-208ENST00000489614 SS18Q15532 418 aa7.13□□□□□ -1.27
NOD1-208ENST00000489614 C20orf173Q96LM9 149 aa7.13□□□□□ -1.27
NOD1-208ENST00000489614 TRAV12-2A0A075B6T6 113 aa7.12□□□□□ -1.27
NOD1-208ENST00000489614 A8MTW9 85 aa7.12□□□□□ -1.27
NOD1-208ENST00000489614 WFDC9Q8NEX5 89 aa7.12□□□□□ -1.27
NOD1-208ENST00000489614 RETNQ9HD89 108 aa7.12□□□□□ -1.27
NOD1-208ENST00000489614 STAB1Q9NY15 2570 aa7.12□□□□□ -1.27
NOD1-208ENST00000489614 IGHV3OR16-13A0A075B7E8 117 aa7.12□□□□□ -1.27
NOD1-208ENST00000489614 IGHV3-74A0A0B4J1X5 117 aa7.12□□□□□ -1.27
NOD1-208ENST00000489614 A0A0U1RRA0 63 aa7.12□□□□□ -1.27
NOD1-208ENST00000489614 IGIPA6NJ69 53 aa7.12□□□□□ -1.27
NOD1-208ENST00000489614 FP248Q71RG6 208 aaPredicted RBP7.12□□□□□ -1.27
NOD1-208ENST00000489614 APRG1Q8IVJ8 170 aa7.12□□□□□ -1.27
NOD1-208ENST00000489614 TRAV23DV6A0A075B6W5 121 aa7.11□□□□□ -1.27
NOD1-208ENST00000489614 IGHV3-66A0A0C4DH42 116 aa7.11□□□□□ -1.27
NOD1-208ENST00000489614 A8MZ25 164 aa7.11□□□□□ -1.27
NOD1-208ENST00000489614 LEPROTO15243 131 aa7.11□□□□□ -1.27
NOD1-208ENST00000489614 HIST2H2BDQ6DRA6 164 aa7.11□□□□□ -1.27
NOD1-208ENST00000489614 PRIMA1Q86XR5 153 aa7.11□□□□□ -1.27
NOD1-208ENST00000489614 RHPN1-AS1Q9BWJ2 59 aa7.11□□□□□ -1.27
NOD1-208ENST00000489614 Q9HAA7 133 aa7.11□□□□□ -1.27
NOD1-208ENST00000489614 S100A4P26447 101 aaKnown RBP7.11□□□□□ -1.27
NOD1-208ENST00000489614 SLURP1P55000 103 aa7.11□□□□□ -1.27
NOD1-208ENST00000489614 A0A0J9YXV3 536 aa7.1□□□□□ -1.27
NOD1-208ENST00000489614 OXLD1Q5BKU9 147 aa7.1□□□□□ -1.27
NOD1-208ENST00000489614 C9orf47Q6ZRZ4 202 aa7.1□□□□□ -1.27
NOD1-208ENST00000489614 DNAL4O96015 105 aa7.1□□□□□ -1.27
NOD1-208ENST00000489614 ZNF876PQ49A33 203 aa7.1□□□□□ -1.27
NOD1-208ENST00000489614 K7EQG2 157 aa7.09□□□□□ -1.27
NOD1-208ENST00000489614 GHRHP01286 108 aa7.09□□□□□ -1.27
NOD1-208ENST00000489614 DEFB136Q30KP8 78 aa7.09□□□□□ -1.27
NOD1-208ENST00000489614 TMEM61Q8N0U2 210 aa7.09□□□□□ -1.28
NOD1-208ENST00000489614 MPLKIPQ8TAP9 179 aa7.09□□□□□ -1.28
NOD1-208ENST00000489614 C14orf132Q9NPU4 83 aa7.09□□□□□ -1.28
NOD1-208ENST00000489614 LINC00846Q9NV44 126 aa7.09□□□□□ -1.28
NOD1-208ENST00000489614 SERP1Q9Y6X1 66 aa7.09□□□□□ -1.28
NOD1-208ENST00000489614 RBMY1BA6NDE4 496 aaKnown RBP7.08□□□□□ -1.28
NOD1-208ENST00000489614 RBMY1EA6NEQ0 496 aaKnown RBP7.08□□□□□ -1.28
NOD1-208ENST00000489614 F5H697 171 aa7.08□□□□□ -1.28
NOD1-208ENST00000489614 NDUFC2O95298 119 aa7.08□□□□□ -1.28
NOD1-208ENST00000489614 RBMY1DP0C7P1 496 aaKnown RBP7.08□□□□□ -1.28
NOD1-208ENST00000489614 RBMY1A1P0DJD3 496 aaKnown RBP7.08□□□□□ -1.28
NOD1-208ENST00000489614 RBMY1CP0DJD4 496 aa7.08□□□□□ -1.28
NOD1-208ENST00000489614 IGHV3-30-3P0DP02 117 aa7.08□□□□□ -1.28
NOD1-208ENST00000489614 RBMY1FQ15415 496 aaKnown RBP7.08□□□□□ -1.28
NOD1-208ENST00000489614 LITAFQ99732 161 aa7.08□□□□□ -1.28
NOD1-208ENST00000489614 PHLDA3Q9Y5J5 127 aa7.08□□□□□ -1.28
NOD1-208ENST00000489614 IGHV3-49A0A0A0MS15 119 aa7.07□□□□□ -1.28
NOD1-208ENST00000489614 RBM3P98179 157 aaKnown RBP7.07□□□□□ -1.28
NOD1-208ENST00000489614 KNCNA6PVL3 124 aa7.07□□□□□ -1.28
NOD1-208ENST00000489614 XCL1P47992 114 aa7.07□□□□□ -1.28
NOD1-208ENST00000489614 C9orf129Q5T035 196 aaKnown RBP7.07□□□□□ -1.28
NOD1-208ENST00000489614 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.07□□□□□ -1.28
NOD1-208ENST00000489614 C11orf44Q8N8P7 122 aa7.07□□□□□ -1.28
NOD1-208ENST00000489614 XCL2Q9UBD3 114 aa7.07□□□□□ -1.28
NOD1-208ENST00000489614 LENEPQ9Y5L5 61 aa7.07□□□□□ -1.28
NOD1-208ENST00000489614 SORL1Q92673 2214 aa7.06□□□□□ -1.28
NOD1-208ENST00000489614 SMIM26A0A096LP01 95 aa7.06□□□□□ -1.28
NOD1-208ENST00000489614 CCL24O00175 119 aa7.06□□□□□ -1.28
NOD1-208ENST00000489614 ZNF625Q96I27 306 aaPredicted RBP7.06□□□□□ -1.28
NOD1-208ENST00000489614 NDUFA12Q9UI09 145 aa7.06□□□□□ -1.28
NOD1-208ENST00000489614 SNURFQ9Y675 71 aa7.06□□□□□ -1.28
NOD1-208ENST00000489614 INAFM2P0DMQ5 153 aa7.06□□□□□ -1.28
NOD1-208ENST00000489614 DEFB114Q30KQ6 69 aa7.06□□□□□ -1.28
NOD1-208ENST00000489614 S100A7L2Q5SY68 101 aa7.06□□□□□ -1.28
NOD1-208ENST00000489614 RNASE13Q5GAN3 156 aaKnown RBP7.05□□□□□ -1.28
NOD1-208ENST00000489614 TMEM141Q96I45 108 aa7.05□□□□□ -1.28
NOD1-208ENST00000489614 C22orf24Q9Y442 160 aa7.05□□□□□ -1.28
NOD1-208ENST00000489614 LYPD5Q6UWN5 251 aa7.05□□□□□ -1.28
NOD1-208ENST00000489614 A0A087WWL8 130 aa7.04□□□□□ -1.28
NOD1-208ENST00000489614 SDHAF1A6NFY7 115 aa7.04□□□□□ -1.28
NOD1-208ENST00000489614 RPL28P46779 137 aaKnown RBP7.04□□□□□ -1.28
NOD1-208ENST00000489614 MIAQ16674 131 aa7.04□□□□□ -1.28
NOD1-208ENST00000489614 FAM218AQ96MZ4 157 aa7.04□□□□□ -1.28
NOD1-208ENST00000489614 TENM1Q9UKZ4 2725 aa7.04□□□□□ -1.28
NOD1-208ENST00000489614 COX7A2LO14548 114 aa7.04□□□□□ -1.28
NOD1-208ENST00000489614 TIMM17BO60830 172 aa7.04□□□□□ -1.28
NOD1-208ENST00000489614 SOSTDC1Q6X4U4 206 aa7.04□□□□□ -1.28
NOD1-208ENST00000489614 FBN1P35555 2871 aaKnown RBP7.04□□□□□ -1.28
NOD1-208ENST00000489614 ZFAND2AQ8N6M9 145 aa7.04□□□□□ -1.28
NOD1-208ENST00000489614 UBE2D4Q9Y2X8 147 aa7.04□□□□□ -1.28
NOD1-208ENST00000489614 H7BZZ5 65 aa7.03□□□□□ -1.28
NOD1-208ENST00000489614 PRR9Q5T870 116 aa7.03□□□□□ -1.28
NOD1-208ENST00000489614 FAM19A1Q7Z5A9 133 aa7.03□□□□□ -1.28
NOD1-208ENST00000489614 KLLNB2CW77 178 aa7.03□□□□□ -1.28
NOD1-208ENST00000489614 IGLV1-51P01701 117 aa7.03□□□□□ -1.28
NOD1-208ENST00000489614 FAM74A4Q5TZK3 123 aa7.03□□□□□ -1.28
NOD1-208ENST00000489614 TIMM17AQ99595 171 aa7.03□□□□□ -1.28
NOD1-208ENST00000489614 NDUFC2-KCTD14E9PQ53 114 aa7.02□□□□□ -1.29
NOD1-208ENST00000489614 GNRH2O43555 120 aa7.02□□□□□ -1.29
NOD1-208ENST00000489614 Q6JHZ5 121 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms