RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 IGLV4-3A0A075B6K6 122 aa11.17□□□□□ -0.62
MDC1-206ENST00000489540 ZNF561-AS1K7EIQ3 104 aa11.17□□□□□ -0.62
MDC1-206ENST00000489540 SCXQ7RTU7 201 aa11.17□□□□□ -0.62
MDC1-206ENST00000489540 TRAPPC1Q9Y5R8 145 aa11.17□□□□□ -0.62
MDC1-206ENST00000489540 APOMO95445 188 aa11.16□□□□□ -0.62
MDC1-206ENST00000489540 Q6ZN92 141 aa11.16□□□□□ -0.62
MDC1-206ENST00000489540 C5orf38Q86SI9 138 aa11.16□□□□□ -0.62
MDC1-206ENST00000489540 FAT1Q14517 4588 aa11.15□□□□□ -0.62
MDC1-206ENST00000489540 S100A6P06703 90 aa11.15□□□□□ -0.62
MDC1-206ENST00000489540 Q5VSD8 79 aa11.15□□□□□ -0.62
MDC1-206ENST00000489540 TEX43Q6ZNM6 134 aa11.15□□□□□ -0.62
MDC1-206ENST00000489540 CIRBP-AS1Q8TBR5 109 aa11.15□□□□□ -0.62
MDC1-206ENST00000489540 VCX2Q9H322 139 aa11.15□□□□□ -0.62
MDC1-206ENST00000489540 IGHV3OR16-9A0A0B4J2B5 98 aa11.14□□□□□ -0.63
MDC1-206ENST00000489540 LINC01546A6NGU7 62 aa11.14□□□□□ -0.63
MDC1-206ENST00000489540 LINC01549A6NIU2 74 aa11.14□□□□□ -0.63
MDC1-206ENST00000489540 IGIPA6NJ69 53 aa11.14□□□□□ -0.63
MDC1-206ENST00000489540 PAPPA-AS1Q5QFB9 102 aa11.14□□□□□ -0.63
MDC1-206ENST00000489540 TOMM6Q96B49 74 aa11.14□□□□□ -0.63
MDC1-206ENST00000489540 YPEL4Q96NS1 127 aa11.14□□□□□ -0.63
MDC1-206ENST00000489540 C2orf88Q9BSF0 95 aa11.14□□□□□ -0.63
MDC1-206ENST00000489540 ABCA13Q86UQ4 5058 aa11.12□□□□□ -0.63
MDC1-206ENST00000489540 FA2HQ7L5A8 372 aa11.12□□□□□ -0.63
MDC1-206ENST00000489540 AMELXQ99217 191 aa11.12□□□□□ -0.63
MDC1-206ENST00000489540 TIMM17AQ99595 171 aa11.12□□□□□ -0.63
MDC1-206ENST00000489540 SYCNQ0VAF6 134 aa11.11□□□□□ -0.63
MDC1-206ENST00000489540 LINC00526Q96FQ7 95 aa11.11□□□□□ -0.63
MDC1-206ENST00000489540 PKIGQ9Y2B9 76 aa11.11□□□□□ -0.63
MDC1-206ENST00000489540 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.11□□□□□ -0.63
MDC1-206ENST00000489540 PCLOQ9Y6V0 5065 aa11.11□□□□□ -0.63
MDC1-206ENST00000489540 IGLV4-69A0A075B6H9 119 aa11.1□□□□□ -0.63
MDC1-206ENST00000489540 UBE2D1P51668 147 aa11.1□□□□□ -0.63
MDC1-206ENST00000489540 CIRBPQ14011 172 aaKnown RBP11.1□□□□□ -0.63
MDC1-206ENST00000489540 LINC00242Q5T6M2 205 aa11.1□□□□□ -0.63
MDC1-206ENST00000489540 ERASQ7Z444 233 aa11.1□□□□□ -0.63
MDC1-206ENST00000489540 DPH3Q96FX2 82 aa11.1□□□□□ -0.63
MDC1-206ENST00000489540 C2orf48Q96LS8 159 aa11.1□□□□□ -0.63
MDC1-206ENST00000489540 CARD19Q96LW7 228 aa11.1□□□□□ -0.63
MDC1-206ENST00000489540 COX6A2Q02221 97 aa11.09□□□□□ -0.63
MDC1-206ENST00000489540 LINC00528Q8N1L1 170 aa11.09□□□□□ -0.63
MDC1-206ENST00000489540 OR10D4PQ8NGN7 298 aa11.09□□□□□ -0.63
MDC1-206ENST00000489540 SCGB3A1Q96QR1 104 aa11.09□□□□□ -0.63
MDC1-206ENST00000489540 A0A087WZ39 114 aa11.09□□□□□ -0.63
MDC1-206ENST00000489540 PLA2G1BP04054 148 aaKnown RBP11.09□□□□□ -0.63
MDC1-206ENST00000489540 PANO1I0J062 215 aa11.08□□□□□ -0.64
MDC1-206ENST00000489540 SPAG11BQ08648 103 aa11.08□□□□□ -0.64
MDC1-206ENST00000489540 ZC2HC1BQ5TFG8 222 aa11.08□□□□□ -0.64
MDC1-206ENST00000489540 LINC00173Q6ZV60 143 aa11.08□□□□□ -0.64
MDC1-206ENST00000489540 CAMK2N2Q96S95 79 aa11.08□□□□□ -0.64
MDC1-206ENST00000489540 F8WDY8 70 aa11.07□□□□□ -0.64
MDC1-206ENST00000489540 SEC11AP67812 179 aa11.07□□□□□ -0.64
MDC1-206ENST00000489540 FAM19A3Q7Z5A8 133 aa11.07□□□□□ -0.64
MDC1-206ENST00000489540 LINC01561Q8N1V8 128 aa11.07□□□□□ -0.64
MDC1-206ENST00000489540 C18orf32Q8TCD1 76 aa11.07□□□□□ -0.64
MDC1-206ENST00000489540 ORAOV1Q8WV07 137 aa11.07□□□□□ -0.64
MDC1-206ENST00000489540 C5orf52A6NGY3 159 aa11.06□□□□□ -0.64
MDC1-206ENST00000489540 LINC00614P0C842 121 aa11.06□□□□□ -0.64
MDC1-206ENST00000489540 INAFM2P0DMQ5 153 aa11.06□□□□□ -0.64
MDC1-206ENST00000489540 SPACA4Q8TDM5 124 aa11.06□□□□□ -0.64
MDC1-206ENST00000489540 CHTF8P0CG12 524 aa11.05□□□□□ -0.64
MDC1-206ENST00000489540 AKR1D1P51857 326 aa11.05□□□□□ -0.64
MDC1-206ENST00000489540 Q6ZRU5 148 aa11.05□□□□□ -0.64
MDC1-206ENST00000489540 LINC00474Q9P2X8 69 aa11.05□□□□□ -0.64
MDC1-206ENST00000489540 SNRPEP62304 92 aaKnown RBP11.04□□□□□ -0.64
MDC1-206ENST00000489540 LINC00518Q8N0U6 118 aa11.04□□□□□ -0.64
MDC1-206ENST00000489540 A0A087WYN8 130 aa11.03□□□□□ -0.64
MDC1-206ENST00000489540 HERVK_113P63121 156 aa11.03□□□□□ -0.64
MDC1-206ENST00000489540 RNF151Q2KHN1 245 aa11.03□□□□□ -0.64
MDC1-206ENST00000489540 IGKV2-24A0A0C4DH68 120 aa11.02□□□□□ -0.64
MDC1-206ENST00000489540 MAJINQ3KP22 176 aa11.02□□□□□ -0.64
MDC1-206ENST00000489540 URB1-AS1Q96HZ7 61 aa11.02□□□□□ -0.64
MDC1-206ENST00000489540 GEMIN7Q9H840 131 aaKnown RBP11.02□□□□□ -0.64
MDC1-206ENST00000489540 PLAC8Q9NZF1 115 aa11.02□□□□□ -0.64
MDC1-206ENST00000489540 A0A096LNI7 61 aa11.01□□□□□ -0.65
MDC1-206ENST00000489540 LOC107984640A0A0U1RRK4 108 aa11.01□□□□□ -0.65
MDC1-206ENST00000489540 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.01□□□□□ -0.65
MDC1-206ENST00000489540 MRPL35Q9NZE8 188 aaKnown RBP11.01□□□□□ -0.65
MDC1-206ENST00000489540 NDUFA1O15239 70 aa11.01□□□□□ -0.65
MDC1-206ENST00000489540 SMIM6P0DI80 62 aa11.01□□□□□ -0.65
MDC1-206ENST00000489540 CST9LQ9H4G1 147 aa11.01□□□□□ -0.65
MDC1-206ENST00000489540 HBDP02042 147 aa11□□□□□ -0.65
MDC1-206ENST00000489540 KIAA0087Q14695 138 aa11□□□□□ -0.65
MDC1-206ENST00000489540 PMVKQ15126 192 aa11□□□□□ -0.65
MDC1-206ENST00000489540 VPS13BQ7Z7G8 4022 aa10.99□□□□□ -0.65
MDC1-206ENST00000489540 A0A0J9YXV3 536 aa10.99□□□□□ -0.65
MDC1-206ENST00000489540 TINCRA0A1B0GVN0 87 aa10.99□□□□□ -0.65
MDC1-206ENST00000489540 STPG4Q8N801 248 aa10.99□□□□□ -0.65
MDC1-206ENST00000489540 A0A096LNJ9 63 aa10.98□□□□□ -0.65
MDC1-206ENST00000489540 TRGC2P03986 189 aa10.98□□□□□ -0.65
MDC1-206ENST00000489540 PTTG1IPP53801 180 aa10.98□□□□□ -0.65
MDC1-206ENST00000489540 GAGE2BQ13066 116 aa10.98□□□□□ -0.65
MDC1-206ENST00000489540 PACRGQ96M98 296 aaPredicted RBP10.98□□□□□ -0.65
MDC1-206ENST00000489540 CDKN2A-AS1Q9UH64 79 aa10.98□□□□□ -0.65
MDC1-206ENST00000489540 HIST1H2BKO60814 126 aa10.97□□□□□ -0.65
MDC1-206ENST00000489540 HIST1H2BJP06899 126 aa10.97□□□□□ -0.65
MDC1-206ENST00000489540 PRSS2P07478 247 aa10.97□□□□□ -0.65
MDC1-206ENST00000489540 HIST1H2BOP23527 126 aa10.97□□□□□ -0.65
MDC1-206ENST00000489540 HIST1H2BBP33778 126 aa10.97□□□□□ -0.65
MDC1-206ENST00000489540 HIST1H2BDP58876 126 aa10.97□□□□□ -0.65
MDC1-206ENST00000489540 RPL37AP61513 92 aaKnown RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms