RNA–Protein interactions for RNA: ENST00000489500.1

TNRC6B-208, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 2

Gene TNRC6B, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-208ENST00000489500 TSHBP01222 138 aa5.6□□□□□ -1.51
TNRC6B-208ENST00000489500 CHTF8P0CG12 524 aa5.6□□□□□ -1.51
TNRC6B-208ENST00000489500 CKS2P33552 79 aa5.6□□□□□ -1.51
TNRC6B-208ENST00000489500 POLR2KP53803 58 aaKnown RBP5.6□□□□□ -1.51
TNRC6B-208ENST00000489500 ADIRFQ15847 76 aa5.6□□□□□ -1.51
TNRC6B-208ENST00000489500 CDC42SE2Q9NRR3 84 aa5.6□□□□□ -1.51
TNRC6B-208ENST00000489500 NAT8Q9UHE5 227 aa5.6□□□□□ -1.51
TNRC6B-208ENST00000489500 CSDC2Q9Y534 153 aaKnown RBP5.6□□□□□ -1.51
TNRC6B-208ENST00000489500 PANO1I0J062 215 aa5.59□□□□□ -1.51
TNRC6B-208ENST00000489500 COX7A2LO14548 114 aa5.59□□□□□ -1.51
TNRC6B-208ENST00000489500 SYCNQ0VAF6 134 aa5.59□□□□□ -1.51
TNRC6B-208ENST00000489500 NUP35Q8NFH5 326 aa5.59□□□□□ -1.51
TNRC6B-208ENST00000489500 C20orf78Q9BR46 151 aa5.59□□□□□ -1.51
TNRC6B-208ENST00000489500 V9GYV3 84 aa5.59□□□□□ -1.51
TNRC6B-208ENST00000489500 MYCBP2O75592 4640 aa5.59□□□□□ -1.52
TNRC6B-208ENST00000489500 HERC1Q15751 4861 aa5.58□□□□□ -1.52
TNRC6B-208ENST00000489500 LOC107984640A0A0U1RRK4 108 aa5.58□□□□□ -1.52
TNRC6B-208ENST00000489500 PHOX2AO14813 284 aa5.58□□□□□ -1.52
TNRC6B-208ENST00000489500 CAMPP49913 170 aa5.58□□□□□ -1.52
TNRC6B-208ENST00000489500 RPL23P62829 140 aaKnown RBP5.58□□□□□ -1.52
TNRC6B-208ENST00000489500 IGLV4-69A0A075B6H9 119 aa5.57□□□□□ -1.52
TNRC6B-208ENST00000489500 SMIM27A0A1W2PRY6 76 aa5.57□□□□□ -1.52
TNRC6B-208ENST00000489500 PPBPP02775 128 aa5.57□□□□□ -1.52
TNRC6B-208ENST00000489500 FAM104BQ5XKR9 115 aa5.57□□□□□ -1.52
TNRC6B-208ENST00000489500 REG3GQ6UW15 175 aa5.57□□□□□ -1.52
TNRC6B-208ENST00000489500 CAMK2N2Q96S95 79 aa5.57□□□□□ -1.52
TNRC6B-208ENST00000489500 TIMM21Q9BVV7 248 aa5.57□□□□□ -1.52
TNRC6B-208ENST00000489500 A0A096LNI7 61 aa5.56□□□□□ -1.52
TNRC6B-208ENST00000489500 TRAV13-1A0A0B4J241 112 aa5.56□□□□□ -1.52
TNRC6B-208ENST00000489500 F8WDY8 70 aa5.56□□□□□ -1.52
TNRC6B-208ENST00000489500 SMKR1H3BMG3 65 aa5.56□□□□□ -1.52
TNRC6B-208ENST00000489500 RAB5AP20339 215 aa5.56□□□□□ -1.52
TNRC6B-208ENST00000489500 RPL32P62910 135 aaKnown RBP5.56□□□□□ -1.52
TNRC6B-208ENST00000489500 HBBP68871 147 aa5.56□□□□□ -1.52
TNRC6B-208ENST00000489500 MRPL51Q4U2R6 128 aaKnown RBP5.56□□□□□ -1.52
TNRC6B-208ENST00000489500 MPLKIPQ8TAP9 179 aa5.56□□□□□ -1.52
TNRC6B-208ENST00000489500 C2orf48Q96LS8 159 aa5.56□□□□□ -1.52
TNRC6B-208ENST00000489500 UBE2D4Q9Y2X8 147 aa5.56□□□□□ -1.52
TNRC6B-208ENST00000489500 TRBV24-1A0A075B6N3 115 aa5.55□□□□□ -1.52
TNRC6B-208ENST00000489500 GAGE2BQ13066 116 aa5.55□□□□□ -1.52
TNRC6B-208ENST00000489500 SPINK6Q6UWN8 80 aa5.55□□□□□ -1.52
TNRC6B-208ENST00000489500 Q6ZRP5 223 aa5.55□□□□□ -1.52
TNRC6B-208ENST00000489500 SPANXA1Q9NS26 97 aa5.55□□□□□ -1.52
TNRC6B-208ENST00000489500 GAS8-AS1O95177 125 aa5.54□□□□□ -1.52
TNRC6B-208ENST00000489500 TNFRSF6BO95407 300 aa5.54□□□□□ -1.52
TNRC6B-208ENST00000489500 IFI27P40305 119 aaPredicted RBP5.54□□□□□ -1.52
TNRC6B-208ENST00000489500 HNRNPA3P51991 378 aaKnown RBP5.54□□□□□ -1.52
TNRC6B-208ENST00000489500 PRR3P79522 188 aaKnown RBP5.54□□□□□ -1.52
TNRC6B-208ENST00000489500 ATP5L2Q7Z4Y8 100 aa5.54□□□□□ -1.52
TNRC6B-208ENST00000489500 OR10D4PQ8NGN7 298 aa5.54□□□□□ -1.52
TNRC6B-208ENST00000489500 IMMP2LQ96T52 175 aa5.54□□□□□ -1.52
TNRC6B-208ENST00000489500 SMIM2Q9BVW6 85 aa5.54□□□□□ -1.52
TNRC6B-208ENST00000489500 TGIF2-C20orf24A0A0A6YYL0 155 aa5.53□□□□□ -1.52
TNRC6B-208ENST00000489500 IGLV5-39A0A0G2JS06 123 aa5.53□□□□□ -1.52
TNRC6B-208ENST00000489500 D6R8Y8 96 aa5.53□□□□□ -1.52
TNRC6B-208ENST00000489500 RAB14P61106 215 aa5.53□□□□□ -1.52
TNRC6B-208ENST00000489500 RPL18AQ02543 176 aaKnown RBP5.53□□□□□ -1.52
TNRC6B-208ENST00000489500 SPAG11BQ08648 103 aa5.53□□□□□ -1.52
TNRC6B-208ENST00000489500 MRPL54Q6P161 138 aaKnown RBP5.53□□□□□ -1.52
TNRC6B-208ENST00000489500 C5orf38Q86SI9 138 aa5.53□□□□□ -1.52
TNRC6B-208ENST00000489500 ORMDL3Q8N138 153 aa5.53□□□□□ -1.52
TNRC6B-208ENST00000489500 LINC00526Q96FQ7 95 aa5.53□□□□□ -1.52
TNRC6B-208ENST00000489500 IFITM10A6NMD0 228 aa5.52□□□□□ -1.53
TNRC6B-208ENST00000489500 NDUFA1O15239 70 aa5.52□□□□□ -1.53
TNRC6B-208ENST00000489500 G0S2P27469 103 aa5.52□□□□□ -1.53
TNRC6B-208ENST00000489500 MRPS36P82909 103 aaKnown RBP5.52□□□□□ -1.53
TNRC6B-208ENST00000489500 RNASE13Q5GAN3 156 aaKnown RBP5.52□□□□□ -1.53
TNRC6B-208ENST00000489500 TMEM136Q6ZRR5 245 aa5.52□□□□□ -1.53
TNRC6B-208ENST00000489500 Q6ZUT4 128 aa5.52□□□□□ -1.53
TNRC6B-208ENST00000489500 ORAOV1Q8WV07 137 aa5.52□□□□□ -1.53
TNRC6B-208ENST00000489500 LAMTOR2Q9Y2Q5 125 aa5.52□□□□□ -1.53
TNRC6B-208ENST00000489500 MT-ND4LP03901 98 aa5.51□□□□□ -1.53
TNRC6B-208ENST00000489500 MT-ND6P03923 174 aa5.51□□□□□ -1.53
TNRC6B-208ENST00000489500 PNRC1Q12796 327 aaPredicted RBP5.51□□□□□ -1.53
TNRC6B-208ENST00000489500 Q6ZN92 141 aa5.51□□□□□ -1.53
TNRC6B-208ENST00000489500 LINC01600Q96MT4 127 aa5.51□□□□□ -1.53
TNRC6B-208ENST00000489500 PRELID3AQ96N28 172 aa5.51□□□□□ -1.53
TNRC6B-208ENST00000489500 C2orf88Q9BSF0 95 aa5.51□□□□□ -1.53
TNRC6B-208ENST00000489500 MRPL35Q9NZE8 188 aaKnown RBP5.51□□□□□ -1.53
TNRC6B-208ENST00000489500 MAP1LC3AQ9H492 121 aa5.5□□□□□ -1.53
TNRC6B-208ENST00000489500 A0A1B0GXF2 115 aa5.49□□□□□ -1.53
TNRC6B-208ENST00000489500 K7EMI3 77 aa5.49□□□□□ -1.53
TNRC6B-208ENST00000489500 NPYP01303 97 aa5.49□□□□□ -1.53
TNRC6B-208ENST00000489500 RPL39P62891 51 aaKnown RBP5.49□□□□□ -1.53
TNRC6B-208ENST00000489500 C9orf116Q5BN46 136 aaPredicted RBP5.49□□□□□ -1.53
TNRC6B-208ENST00000489500 PAPPA-AS1Q5QFB9 102 aa5.49□□□□□ -1.53
TNRC6B-208ENST00000489500 TEX43Q6ZNM6 134 aa5.49□□□□□ -1.53
TNRC6B-208ENST00000489500 TMEM141Q96I45 108 aa5.49□□□□□ -1.53
TNRC6B-208ENST00000489500 PACRGQ96M98 296 aaPredicted RBP5.49□□□□□ -1.53
TNRC6B-208ENST00000489500 PYGO1Q9Y3Y4 419 aa5.49□□□□□ -1.53
TNRC6B-208ENST00000489500 A0A0J9YXV3 536 aa5.48□□□□□ -1.53
TNRC6B-208ENST00000489500 C9JQL5 133 aa5.48□□□□□ -1.53
TNRC6B-208ENST00000489500 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.48□□□□□ -1.53
TNRC6B-208ENST00000489500 PRSS2P07478 247 aa5.48□□□□□ -1.53
TNRC6B-208ENST00000489500 MT1HL1P0DM35 61 aa5.48□□□□□ -1.53
TNRC6B-208ENST00000489500 SEC11AP67812 179 aa5.48□□□□□ -1.53
TNRC6B-208ENST00000489500 ORMDL2Q53FV1 153 aa5.48□□□□□ -1.53
TNRC6B-208ENST00000489500 CYSLTR1Q9Y271 337 aa5.48□□□□□ -1.53
TNRC6B-208ENST00000489500 IGHV3OR16-9A0A0B4J2B5 98 aa5.47□□□□□ -1.53
TNRC6B-208ENST00000489500 TRBV30A0A0K0K1B3 111 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms