RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 S100A2P29034 98 aa7.61□□□□□ -1.19
VPS16-208ENST00000487461 CTAG1AP78358 180 aa7.61□□□□□ -1.19
VPS16-208ENST00000487461 CD164L2Q6UWJ8 174 aa7.61□□□□□ -1.19
VPS16-208ENST00000487461 HIST3H2BBQ8N257 126 aa7.61□□□□□ -1.19
VPS16-208ENST00000487461 CARD19Q96LW7 228 aa7.61□□□□□ -1.19
VPS16-208ENST00000487461 LINC01600Q96MT4 127 aa7.61□□□□□ -1.19
VPS16-208ENST00000487461 LINC00474Q9P2X8 69 aa7.61□□□□□ -1.19
VPS16-208ENST00000487461 TNXBP22105 4242 aa7.6□□□□□ -1.19
VPS16-208ENST00000487461 VCYO14598 125 aa7.6□□□□□ -1.19
VPS16-208ENST00000487461 V9GYV3 84 aa7.6□□□□□ -1.19
VPS16-208ENST00000487461 IFITM10A6NMD0 228 aa7.59□□□□□ -1.19
VPS16-208ENST00000487461 ZNF561-AS1K7EIQ3 104 aa7.59□□□□□ -1.19
VPS16-208ENST00000487461 SYCNQ0VAF6 134 aa7.59□□□□□ -1.19
VPS16-208ENST00000487461 RIGQ13278 110 aa7.59□□□□□ -1.19
VPS16-208ENST00000487461 ODF1Q14990 250 aa7.59□□□□□ -1.19
VPS16-208ENST00000487461 NRACQ8N912 160 aa7.59□□□□□ -1.19
VPS16-208ENST00000487461 NUP35Q8NFH5 326 aa7.59□□□□□ -1.19
VPS16-208ENST00000487461 PCP4L1A6NKN8 68 aa7.58□□□□□ -1.2
VPS16-208ENST00000487461 FCER1GP30273 86 aa7.58□□□□□ -1.2
VPS16-208ENST00000487461 SRSF9Q13242 221 aaKnown RBP eCLIP7.58□□□□□ -1.2
VPS16-208ENST00000487461 COX19Q49B96 90 aa7.58□□□□□ -1.2
VPS16-208ENST00000487461 IGLV4-69A0A075B6H9 119 aa7.57□□□□□ -1.2
VPS16-208ENST00000487461 CAMPP49913 170 aa7.57□□□□□ -1.2
VPS16-208ENST00000487461 SUMO2P61956 95 aaKnown RBP7.57□□□□□ -1.2
VPS16-208ENST00000487461 RNASE13Q5GAN3 156 aaKnown RBP7.57□□□□□ -1.2
VPS16-208ENST00000487461 SPINK6Q6UWN8 80 aa7.57□□□□□ -1.2
VPS16-208ENST00000487461 PKIGQ9Y2B9 76 aa7.57□□□□□ -1.2
VPS16-208ENST00000487461 UBE2D4Q9Y2X8 147 aa7.57□□□□□ -1.2
VPS16-208ENST00000487461 CSDC2Q9Y534 153 aaKnown RBP7.57□□□□□ -1.2
VPS16-208ENST00000487461 A0A1W2PNN7 141 aa7.56□□□□□ -1.2
VPS16-208ENST00000487461 COX7A2LO14548 114 aa7.56□□□□□ -1.2
VPS16-208ENST00000487461 PPP1R17O96001 155 aa7.56□□□□□ -1.2
VPS16-208ENST00000487461 MALP21145 153 aa7.56□□□□□ -1.2
VPS16-208ENST00000487461 PTTG1IPP53801 180 aa7.56□□□□□ -1.2
VPS16-208ENST00000487461 KRTAP10-8P60410 259 aa7.56□□□□□ -1.2
VPS16-208ENST00000487461 GAGE2BQ13066 116 aa7.56□□□□□ -1.2
VPS16-208ENST00000487461 TRAV13-1A0A0B4J241 112 aa7.55□□□□□ -1.2
VPS16-208ENST00000487461 A0A0J9YXV3 536 aa7.55□□□□□ -1.2
VPS16-208ENST00000487461 LOC107984640A0A0U1RRK4 108 aa7.55□□□□□ -1.2
VPS16-208ENST00000487461 MRPL51Q4U2R6 128 aaKnown RBP7.55□□□□□ -1.2
VPS16-208ENST00000487461 PYY3Q5JQD4 70 aa7.55□□□□□ -1.2
VPS16-208ENST00000487461 FAM104BQ5XKR9 115 aa7.55□□□□□ -1.2
VPS16-208ENST00000487461 Q6ZRP5 223 aa7.55□□□□□ -1.2
VPS16-208ENST00000487461 C5orf38Q86SI9 138 aa7.55□□□□□ -1.2
VPS16-208ENST00000487461 OR10D4PQ8NGN7 298 aa7.55□□□□□ -1.2
VPS16-208ENST00000487461 KIR2DL4Q99706 377 aa7.55□□□□□ -1.2
VPS16-208ENST00000487461 NAT8BQ9UHF3 227 aa7.55□□□□□ -1.2
VPS16-208ENST00000487461 JOSD1Q15040 202 aaPredicted RBP7.54□□□□□ -1.2
VPS16-208ENST00000487461 Q6ZUT4 128 aa7.54□□□□□ -1.2
VPS16-208ENST00000487461 HIST1H2BLQ99880 126 aa7.54□□□□□ -1.2
VPS16-208ENST00000487461 TRAPPC1Q9Y5R8 145 aa7.54□□□□□ -1.2
VPS16-208ENST00000487461 SMIM27A0A1W2PRY6 76 aa7.53□□□□□ -1.2
VPS16-208ENST00000487461 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.53□□□□□ -1.2
VPS16-208ENST00000487461 LRP2P98164 4655 aa7.53□□□□□ -1.2
VPS16-208ENST00000487461 SMAGPQ0VAQ4 97 aa7.53□□□□□ -1.2
VPS16-208ENST00000487461 REG3GQ6UW15 175 aa7.53□□□□□ -1.2
VPS16-208ENST00000487461 FAM104AQ969W3 186 aa7.53□□□□□ -1.2
VPS16-208ENST00000487461 C2orf48Q96LS8 159 aa7.53□□□□□ -1.2
VPS16-208ENST00000487461 PACRGQ96M98 296 aaPredicted RBP7.53□□□□□ -1.2
VPS16-208ENST00000487461 CAMK2N2Q96S95 79 aa7.53□□□□□ -1.2
VPS16-208ENST00000487461 TIMM21Q9BVV7 248 aa7.53□□□□□ -1.2
VPS16-208ENST00000487461 APOMO95445 188 aa7.52□□□□□ -1.21
VPS16-208ENST00000487461 TMEM18Q96B42 140 aa7.52□□□□□ -1.21
VPS16-208ENST00000487461 OPRPNQ99935 248 aaPredicted RBP7.52□□□□□ -1.21
VPS16-208ENST00000487461 C20orf78Q9BR46 151 aa7.52□□□□□ -1.21
VPS16-208ENST00000487461 GNB1LQ9BYB4 327 aa7.52□□□□□ -1.21
VPS16-208ENST00000487461 MT-ND6P03923 174 aa7.51□□□□□ -1.21
VPS16-208ENST00000487461 FABP4P15090 132 aa7.51□□□□□ -1.21
VPS16-208ENST00000487461 CKS2P33552 79 aa7.51□□□□□ -1.21
VPS16-208ENST00000487461 RPL39P62891 51 aaKnown RBP7.51□□□□□ -1.21
VPS16-208ENST00000487461 RPL32P62910 135 aaKnown RBP7.51□□□□□ -1.21
VPS16-208ENST00000487461 C9orf116Q5BN46 136 aaPredicted RBP7.51□□□□□ -1.21
VPS16-208ENST00000487461 RNF213Q63HN8 5207 aa7.5□□□□□ -1.21
VPS16-208ENST00000487461 LINC00587B1AMM8 73 aa7.5□□□□□ -1.21
VPS16-208ENST00000487461 TNFRSF6BO95407 300 aa7.5□□□□□ -1.21
VPS16-208ENST00000487461 A0A1B0GW15 77 aa7.49□□□□□ -1.21
VPS16-208ENST00000487461 RPL18AQ02543 176 aaKnown RBP7.49□□□□□ -1.21
VPS16-208ENST00000487461 SPAG11BQ08648 103 aa7.49□□□□□ -1.21
VPS16-208ENST00000487461 RNF151Q2KHN1 245 aa7.49□□□□□ -1.21
VPS16-208ENST00000487461 PHF5AQ7RTV0 110 aaKnown RBP7.49□□□□□ -1.21
VPS16-208ENST00000487461 PSORS1C2Q9UIG4 136 aa7.49□□□□□ -1.21
VPS16-208ENST00000487461 IGHV3OR16-9A0A0B4J2B5 98 aa7.48□□□□□ -1.21
VPS16-208ENST00000487461 D6R8Y8 96 aa7.48□□□□□ -1.21
VPS16-208ENST00000487461 MRPL54Q6P161 138 aaKnown RBP7.48□□□□□ -1.21
VPS16-208ENST00000487461 SMIM2Q9BVW6 85 aa7.48□□□□□ -1.21
VPS16-208ENST00000487461 A0A1B0GXF2 115 aa7.47□□□□□ -1.21
VPS16-208ENST00000487461 TCAPO15273 167 aa7.47□□□□□ -1.21
VPS16-208ENST00000487461 NPYP01303 97 aa7.47□□□□□ -1.21
VPS16-208ENST00000487461 MRPS36P82909 103 aaKnown RBP7.47□□□□□ -1.21
VPS16-208ENST00000487461 C10orf25Q5T742 122 aa7.47□□□□□ -1.21
VPS16-208ENST00000487461 ORAOV1Q8WV07 137 aa7.47□□□□□ -1.21
VPS16-208ENST00000487461 MRPL18Q9H0U6 180 aaKnown RBP7.47□□□□□ -1.21
VPS16-208ENST00000487461 SPANXA1Q9NS26 97 aa7.47□□□□□ -1.21
VPS16-208ENST00000487461 MRPL35Q9NZE8 188 aaKnown RBP7.47□□□□□ -1.21
VPS16-208ENST00000487461 TSTD3H0UI37 97 aa7.46□□□□□ -1.22
VPS16-208ENST00000487461 HBBP68871 147 aa7.46□□□□□ -1.22
VPS16-208ENST00000487461 PDZD11Q5EBL8 140 aa7.46□□□□□ -1.22
VPS16-208ENST00000487461 C1orf137Q5JT78 98 aa7.46□□□□□ -1.22
VPS16-208ENST00000487461 F8WDY8 70 aa7.45□□□□□ -1.22
VPS16-208ENST00000487461 UNQ6190/PRO20217Q6UXQ8 127 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms