RNA–Protein interactions for RNA: ENST00000486855.1

PHTF1-211, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 3

Gene PHTF1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-211ENST00000486855 SDHAF1A6NFY7 115 aa3.46□□□□□ -1.86
PHTF1-211ENST00000486855 POLR2KP53803 58 aaKnown RBP3.46□□□□□ -1.86
PHTF1-211ENST00000486855 V9GYV3 84 aa3.46□□□□□ -1.86
PHTF1-211ENST00000486855 RNF213Q63HN8 5207 aa3.46□□□□□ -1.86
PHTF1-211ENST00000486855 TRBV27A0A0K0K1C4 114 aa3.45□□□□□ -1.86
PHTF1-211ENST00000486855 HIGD1CA8MV81 97 aa3.45□□□□□ -1.86
PHTF1-211ENST00000486855 H7C423 109 aa3.45□□□□□ -1.86
PHTF1-211ENST00000486855 GATCO43716 136 aaKnown RBP3.45□□□□□ -1.86
PHTF1-211ENST00000486855 NCR2O95944 276 aa3.45□□□□□ -1.86
PHTF1-211ENST00000486855 OXTP01178 125 aa3.45□□□□□ -1.86
PHTF1-211ENST00000486855 FGF6P10767 208 aa3.45□□□□□ -1.86
PHTF1-211ENST00000486855 RAB4AP20338 218 aa3.45□□□□□ -1.86
PHTF1-211ENST00000486855 KRTAP10-12P60413 245 aa3.45□□□□□ -1.86
PHTF1-211ENST00000486855 SEC61BP60468 96 aaKnown RBP3.45□□□□□ -1.86
PHTF1-211ENST00000486855 RPL37AP61513 92 aaKnown RBP3.45□□□□□ -1.86
PHTF1-211ENST00000486855 VAMP3Q15836 100 aa3.45□□□□□ -1.86
PHTF1-211ENST00000486855 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.45□□□□□ -1.86
PHTF1-211ENST00000486855 TSKUQ8WUA8 353 aa3.45□□□□□ -1.86
PHTF1-211ENST00000486855 CHCHD10Q8WYQ3 142 aaPredicted RBP3.45□□□□□ -1.86
PHTF1-211ENST00000486855 ISOC2Q96AB3 205 aa3.45□□□□□ -1.86
PHTF1-211ENST00000486855 TMEM191AQ9H0A3 160 aa3.45□□□□□ -1.86
PHTF1-211ENST00000486855 OSTCQ9NRP0 149 aa3.45□□□□□ -1.86
PHTF1-211ENST00000486855 PLAC8Q9NZF1 115 aa3.45□□□□□ -1.86
PHTF1-211ENST00000486855 IGHV3-64A0A075B6Q5 118 aa3.44□□□□□ -1.86
PHTF1-211ENST00000486855 A8MWL6 223 aa3.44□□□□□ -1.86
PHTF1-211ENST00000486855 SMKR1H3BMG3 65 aa3.44□□□□□ -1.86
PHTF1-211ENST00000486855 I3L3M4 83 aa3.44□□□□□ -1.86
PHTF1-211ENST00000486855 APCSP02743 223 aa3.44□□□□□ -1.86
PHTF1-211ENST00000486855 RPL23P62829 140 aaKnown RBP3.44□□□□□ -1.86
PHTF1-211ENST00000486855 HIGD2BQ4VC39 106 aa3.44□□□□□ -1.86
PHTF1-211ENST00000486855 MRPL52Q86TS9 123 aaKnown RBP3.44□□□□□ -1.86
PHTF1-211ENST00000486855 AMN1Q8IY45 258 aa3.44□□□□□ -1.86
PHTF1-211ENST00000486855 NUP35Q8NFH5 326 aa3.44□□□□□ -1.86
PHTF1-211ENST00000486855 SMIM7Q9BQ49 75 aa3.44□□□□□ -1.86
PHTF1-211ENST00000486855 TMEM242Q9NWH2 141 aa3.44□□□□□ -1.86
PHTF1-211ENST00000486855 A0A096LNI7 61 aa3.43□□□□□ -1.86
PHTF1-211ENST00000486855 LINC00959A0A1B0GUT2 108 aa3.43□□□□□ -1.86
PHTF1-211ENST00000486855 A0A1B0GUT8 65 aa3.43□□□□□ -1.86
PHTF1-211ENST00000486855 ZNF727A8MUV8 499 aa3.43□□□□□ -1.86
PHTF1-211ENST00000486855 UBE2L6O14933 153 aa3.43□□□□□ -1.86
PHTF1-211ENST00000486855 ZNF25P17030 456 aaPredicted RBP3.43□□□□□ -1.86
PHTF1-211ENST00000486855 COX6A2Q02221 97 aa3.43□□□□□ -1.86
PHTF1-211ENST00000486855 PAPPA-AS1Q5QFB9 102 aa3.43□□□□□ -1.86
PHTF1-211ENST00000486855 LCE1FQ5T754 118 aa3.43□□□□□ -1.86
PHTF1-211ENST00000486855 TEX261Q6UWH6 196 aa3.43□□□□□ -1.86
PHTF1-211ENST00000486855 OR5A1Q8NGJ0 315 aa3.43□□□□□ -1.86
PHTF1-211ENST00000486855 LINC00526Q96FQ7 95 aa3.43□□□□□ -1.86
PHTF1-211ENST00000486855 CDC42SE2Q9NRR3 84 aa3.43□□□□□ -1.86
PHTF1-211ENST00000486855 UBE2D4Q9Y2X8 147 aa3.43□□□□□ -1.86
PHTF1-211ENST00000486855 IGKV3OR2-268A0A0C4DH90 116 aa3.42□□□□□ -1.86
PHTF1-211ENST00000486855 A0A1B0GXF2 115 aa3.42□□□□□ -1.86
PHTF1-211ENST00000486855 SMIM27A0A1W2PRY6 76 aa3.42□□□□□ -1.86
PHTF1-211ENST00000486855 PHOX2AO14813 284 aa3.42□□□□□ -1.86
PHTF1-211ENST00000486855 CCL25O15444 150 aa3.42□□□□□ -1.86
PHTF1-211ENST00000486855 CEBPGP53567 150 aa3.42□□□□□ -1.86
PHTF1-211ENST00000486855 MRAP2Q96G30 205 aa3.42□□□□□ -1.86
PHTF1-211ENST00000486855 EIF5A2Q9GZV4 153 aaKnown RBP3.42□□□□□ -1.86
PHTF1-211ENST00000486855 ST20Q9HBF5 79 aa3.42□□□□□ -1.86
PHTF1-211ENST00000486855 TRBV24-1A0A075B6N3 115 aa3.41□□□□□ -1.86
PHTF1-211ENST00000486855 XCL1P47992 114 aa3.41□□□□□ -1.86
PHTF1-211ENST00000486855 PRR3P79522 188 aaKnown RBP3.41□□□□□ -1.86
PHTF1-211ENST00000486855 MRPL51Q4U2R6 128 aaKnown RBP3.41□□□□□ -1.86
PHTF1-211ENST00000486855 FAM74A3Q4VXF1 159 aa3.41□□□□□ -1.86
PHTF1-211ENST00000486855 FAM104BQ5XKR9 115 aa3.41□□□□□ -1.86
PHTF1-211ENST00000486855 Q6ZRU5 148 aa3.41□□□□□ -1.86
PHTF1-211ENST00000486855 Q6ZUT4 128 aa3.41□□□□□ -1.86
PHTF1-211ENST00000486855 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.4□□□□□ -1.87
PHTF1-211ENST00000486855 IGHV1-58A0A0C4DH39 117 aa3.4□□□□□ -1.87
PHTF1-211ENST00000486855 IGKV2-24A0A0C4DH68 120 aa3.4□□□□□ -1.87
PHTF1-211ENST00000486855 C7orf77A4D0Y5 90 aa3.4□□□□□ -1.87
PHTF1-211ENST00000486855 PMCHP20382 165 aa3.4□□□□□ -1.87
PHTF1-211ENST00000486855 RPL13AP40429 203 aaKnown RBP3.4□□□□□ -1.87
PHTF1-211ENST00000486855 RPL32P62910 135 aaKnown RBP3.4□□□□□ -1.87
PHTF1-211ENST00000486855 TMEM241Q24JQ0 296 aa3.4□□□□□ -1.87
PHTF1-211ENST00000486855 RNASE13Q5GAN3 156 aaKnown RBP3.4□□□□□ -1.87
PHTF1-211ENST00000486855 AMMECR1LQ6DCA0 310 aa3.4□□□□□ -1.87
PHTF1-211ENST00000486855 UQCC3Q6UW78 93 aa3.4□□□□□ -1.87
PHTF1-211ENST00000486855 SMIM15Q7Z3B0 74 aa3.4□□□□□ -1.87
PHTF1-211ENST00000486855 ZNF664Q8N3J9 261 aa3.4□□□□□ -1.87
PHTF1-211ENST00000486855 NAT8Q9UHE5 227 aa3.4□□□□□ -1.87
PHTF1-211ENST00000486855 NAT8BQ9UHF3 227 aa3.4□□□□□ -1.87
PHTF1-211ENST00000486855 IGLV4-69A0A075B6H9 119 aa3.39□□□□□ -1.87
PHTF1-211ENST00000486855 NPYP01303 97 aa3.39□□□□□ -1.87
PHTF1-211ENST00000486855 RPL39P62891 51 aaKnown RBP3.39□□□□□ -1.87
PHTF1-211ENST00000486855 SRSF9Q13242 221 aaKnown RBP eCLIP3.39□□□□□ -1.87
PHTF1-211ENST00000486855 RIGQ13278 110 aa3.39□□□□□ -1.87
PHTF1-211ENST00000486855 ADIRFQ15847 76 aa3.39□□□□□ -1.87
PHTF1-211ENST00000486855 KRTAP7-1Q8IUC3 87 aa3.39□□□□□ -1.87
PHTF1-211ENST00000486855 LINC00518Q8N0U6 118 aa3.39□□□□□ -1.87
PHTF1-211ENST00000486855 STPG4Q8N801 248 aa3.39□□□□□ -1.87
PHTF1-211ENST00000486855 CARD19Q96LW7 228 aa3.39□□□□□ -1.87
PHTF1-211ENST00000486855 OPRPNQ99935 248 aaPredicted RBP3.39□□□□□ -1.87
PHTF1-211ENST00000486855 TIMM21Q9BVV7 248 aa3.39□□□□□ -1.87
PHTF1-211ENST00000486855 IGHV3OR16-9A0A0B4J2B5 98 aa3.38□□□□□ -1.87
PHTF1-211ENST00000486855 A0A1W2PNN7 141 aa3.38□□□□□ -1.87
PHTF1-211ENST00000486855 D6R8Y8 96 aa3.38□□□□□ -1.87
PHTF1-211ENST00000486855 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.38□□□□□ -1.87
PHTF1-211ENST00000486855 KRTAP11-1Q8IUC1 163 aa3.38□□□□□ -1.87
PHTF1-211ENST00000486855 BORCS7Q96B45 105 aa3.38□□□□□ -1.87
PHTF1-211ENST00000486855 LINC01600Q96MT4 127 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms