RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 MIR7-3HGQ8N6C7 128 aa3.58□□□□□ -1.84
COPS3-209ENST00000486810 SPANXA2-OT1Q8N9U9 137 aa3.58□□□□□ -1.84
COPS3-209ENST00000486810 PRR15LQ9BU68 103 aa3.58□□□□□ -1.84
COPS3-209ENST00000486810 PLAC8Q9NZF1 115 aa3.58□□□□□ -1.84
COPS3-209ENST00000486810 TRAV21A0A0B4J279 112 aa3.57□□□□□ -1.84
COPS3-209ENST00000486810 IGHV1-18A0A0C4DH31 117 aa3.57□□□□□ -1.84
COPS3-209ENST00000486810 RTL8CO15255 209 aa3.57□□□□□ -1.84
COPS3-209ENST00000486810 ROMO1P60602 79 aa3.57□□□□□ -1.84
COPS3-209ENST00000486810 DEFB114Q30KQ6 69 aa3.57□□□□□ -1.84
COPS3-209ENST00000486810 C9orf129Q5T035 196 aaKnown RBP3.57□□□□□ -1.84
COPS3-209ENST00000486810 C20orf203Q8NBC4 194 aa3.57□□□□□ -1.84
COPS3-209ENST00000486810 LINC00308Q8TCZ7 52 aa3.57□□□□□ -1.84
COPS3-209ENST00000486810 NDUFA4L2Q9NRX3 87 aa3.57□□□□□ -1.84
COPS3-209ENST00000486810 LINC01558Q9Y6Z2 57 aa3.57□□□□□ -1.84
COPS3-209ENST00000486810 DIDO1Q9BTC0 2240 aaKnown RBP3.56□□□□□ -1.84
COPS3-209ENST00000486810 NCR3O14931 201 aa3.56□□□□□ -1.84
COPS3-209ENST00000486810 NDUFA1O15239 70 aa3.56□□□□□ -1.84
COPS3-209ENST00000486810 IGHV3-48P01763 117 aa3.56□□□□□ -1.84
COPS3-209ENST00000486810 CCL3P10147 92 aa3.56□□□□□ -1.84
COPS3-209ENST00000486810 ERHP84090 104 aaKnown RBP3.56□□□□□ -1.84
COPS3-209ENST00000486810 C1orf134Q5TEV5 83 aa3.56□□□□□ -1.84
COPS3-209ENST00000486810 HIGD2AQ9BW72 106 aa3.56□□□□□ -1.84
COPS3-209ENST00000486810 TNCP24821 2201 aa3.55□□□□□ -1.84
COPS3-209ENST00000486810 KIAA0100Q14667 2235 aaKnown RBP3.55□□□□□ -1.84
COPS3-209ENST00000486810 ZNF407Q9C0G0 2248 aa3.55□□□□□ -1.84
COPS3-209ENST00000486810 TRBV10-1A0A0K0K1A3 114 aa3.55□□□□□ -1.84
COPS3-209ENST00000486810 PRB4P10163 310 aaPredicted RBP3.55□□□□□ -1.84
COPS3-209ENST00000486810 IGHV1-2P23083 117 aa3.55□□□□□ -1.84
COPS3-209ENST00000486810 POLR2KP53803 58 aaKnown RBP3.55□□□□□ -1.84
COPS3-209ENST00000486810 C9orf66Q5T8R8 295 aa3.55□□□□□ -1.84
COPS3-209ENST00000486810 FAM27BQ5VT28 67 aa3.55□□□□□ -1.84
COPS3-209ENST00000486810 ZFAND2AQ8N6M9 145 aa3.55□□□□□ -1.84
COPS3-209ENST00000486810 ZFHX3Q15911 3703 aa3.55□□□□□ -1.84
COPS3-209ENST00000486810 IGHV3-73A0A0B4J1V6 119 aa3.54□□□□□ -1.84
COPS3-209ENST00000486810 REG3GQ6UW15 175 aa3.54□□□□□ -1.84
COPS3-209ENST00000486810 CXCL17Q6UXB2 119 aa3.54□□□□□ -1.84
COPS3-209ENST00000486810 Q6ZQT0 140 aa3.54□□□□□ -1.84
COPS3-209ENST00000486810 FLVCR1-AS1Q8TAF5 88 aa3.54□□□□□ -1.84
COPS3-209ENST00000486810 IGLV4-3A0A075B6K6 122 aa3.53□□□□□ -1.84
COPS3-209ENST00000486810 IGHV3OR16-8A0A075B7F1 116 aa3.53□□□□□ -1.84
COPS3-209ENST00000486810 IGHV3-43A0A0B4J1X8 118 aa3.53□□□□□ -1.84
COPS3-209ENST00000486810 HAMPP81172 84 aa3.53□□□□□ -1.84
COPS3-209ENST00000486810 NDPQ00604 133 aa3.53□□□□□ -1.84
COPS3-209ENST00000486810 Q8NDZ9 215 aa3.53□□□□□ -1.84
COPS3-209ENST00000486810 KLK9Q9UKQ9 250 aa3.53□□□□□ -1.84
COPS3-209ENST00000486810 IGKV2-29A2NJV5 120 aaPredicted RBP3.52□□□□□ -1.85
COPS3-209ENST00000486810 CCL14Q16627 93 aa3.52□□□□□ -1.85
COPS3-209ENST00000486810 LINC00612Q8N6U2 182 aa3.52□□□□□ -1.85
COPS3-209ENST00000486810 CNEP1R1Q8N9A8 125 aa3.52□□□□□ -1.85
COPS3-209ENST00000486810 FDCSPQ8NFU4 85 aa3.52□□□□□ -1.85
COPS3-209ENST00000486810 LINC00208Q96KT6 92 aa3.52□□□□□ -1.85
COPS3-209ENST00000486810 IGHV7-81A0A0B4J1V7 117 aa3.51□□□□□ -1.85
COPS3-209ENST00000486810 IGHV7-4-1A0A0J9YVY3 117 aa3.51□□□□□ -1.85
COPS3-209ENST00000486810 A0A1W2PNM2 257 aa3.51□□□□□ -1.85
COPS3-209ENST00000486810 CRPP02741 224 aa3.51□□□□□ -1.85
COPS3-209ENST00000486810 RNASE13Q5GAN3 156 aaKnown RBP3.51□□□□□ -1.85
COPS3-209ENST00000486810 Q8NAQ8 132 aa3.51□□□□□ -1.85
COPS3-209ENST00000486810 CR1P17927 2039 aa3.51□□□□□ -1.85
COPS3-209ENST00000486810 PDE4DIPQ5VU43 2346 aa3.5□□□□□ -1.85
COPS3-209ENST00000486810 IGHV3-49A0A0A0MS15 119 aa3.5□□□□□ -1.85
COPS3-209ENST00000486810 H3BPC8 53 aa3.5□□□□□ -1.85
COPS3-209ENST00000486810 TFF1P04155 84 aa3.5□□□□□ -1.85
COPS3-209ENST00000486810 DEFB134Q4QY38 66 aa3.5□□□□□ -1.85
COPS3-209ENST00000486810 MUC7Q8TAX7 377 aa3.5□□□□□ -1.85
COPS3-209ENST00000486810 PRR34Q9NV39 138 aa3.5□□□□□ -1.85
COPS3-209ENST00000486810 LENEPQ9Y5L5 61 aa3.5□□□□□ -1.85
COPS3-209ENST00000486810 SDK2Q58EX2 2172 aa3.5□□□□□ -1.85
COPS3-209ENST00000486810 A0A087WSZ3 146 aa3.49□□□□□ -1.85
COPS3-209ENST00000486810 H3BRN7 92 aa3.49□□□□□ -1.85
COPS3-209ENST00000486810 LECT2O14960 151 aa3.49□□□□□ -1.85
COPS3-209ENST00000486810 IGHV3-53P01767 116 aa3.49□□□□□ -1.85
COPS3-209ENST00000486810 CLPSP04118 112 aa3.49□□□□□ -1.85
COPS3-209ENST00000486810 CGB3P0DN86 165 aa3.49□□□□□ -1.85
COPS3-209ENST00000486810 CGB7P0DN87 165 aa3.49□□□□□ -1.85
COPS3-209ENST00000486810 C17orf58Q2M2W7 97 aa3.49□□□□□ -1.85
COPS3-209ENST00000486810 KPRPQ5T749 579 aaPredicted RBP3.49□□□□□ -1.85
COPS3-209ENST00000486810 Q6ZTI0 123 aa3.49□□□□□ -1.85
COPS3-209ENST00000486810 SMIM11BQ8TCY0 68 aa3.49□□□□□ -1.85
COPS3-209ENST00000486810 FGF23Q9GZV9 251 aaPredicted RBP3.49□□□□□ -1.85
COPS3-209ENST00000486810 SVILO95425 2214 aa3.48□□□□□ -1.85
COPS3-209ENST00000486810 IGHV3-74A0A0B4J1X5 117 aa3.48□□□□□ -1.85
COPS3-209ENST00000486810 CLPSL1A2RUU4 121 aa3.48□□□□□ -1.85
COPS3-209ENST00000486810 RPL37AP8A6NKH3 93 aa3.48□□□□□ -1.85
COPS3-209ENST00000486810 IGLV1-47P01700 117 aa3.48□□□□□ -1.85
COPS3-209ENST00000486810 IGKV4-1P06312 121 aa3.48□□□□□ -1.85
COPS3-209ENST00000486810 MSMBP08118 114 aa3.48□□□□□ -1.85
COPS3-209ENST00000486810 CHTF8P0CG12 524 aa3.48□□□□□ -1.85
COPS3-209ENST00000486810 LCE3EQ5T5B0 92 aa3.48□□□□□ -1.85
COPS3-209ENST00000486810 Q6ZR54 194 aa3.48□□□□□ -1.85
COPS3-209ENST00000486810 NTM-AS1Q6ZSK4 140 aa3.48□□□□□ -1.85
COPS3-209ENST00000486810 ADM2Q7Z4H4 148 aa3.48□□□□□ -1.85
COPS3-209ENST00000486810 COX7B2Q8TF08 81 aa3.48□□□□□ -1.85
COPS3-209ENST00000486810 COX14Q96I36 57 aa3.48□□□□□ -1.85
COPS3-209ENST00000486810 MALRD1Q5VYJ5 2156 aa3.48□□□□□ -1.85
COPS3-209ENST00000486810 PRRC2BQ5JSZ5 2229 aaKnown RBP3.47□□□□□ -1.85
COPS3-209ENST00000486810 ETDCA0A1B0GVM5 59 aa3.47□□□□□ -1.85
COPS3-209ENST00000486810 IGHV3-11P01762 117 aa3.47□□□□□ -1.85
COPS3-209ENST00000486810 STATHP02808 62 aa3.47□□□□□ -1.85
COPS3-209ENST00000486810 MIR22HGQ0VDD5 57 aa3.47□□□□□ -1.85
COPS3-209ENST00000486810 CSAG1Q6PB30 78 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms