RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 SEC11AP67812 179 aa11.68□□□□□ -0.54
CHMP3-207ENST00000485465 COX6A2Q02221 97 aa11.68□□□□□ -0.54
CHMP3-207ENST00000485465 TINCRA0A1B0GVN0 87 aa11.67□□□□□ -0.54
CHMP3-207ENST00000485465 KRTDAPP60985 99 aa11.67□□□□□ -0.54
CHMP3-207ENST00000485465 ODF1Q14990 250 aa11.67□□□□□ -0.54
CHMP3-207ENST00000485465 SPATA12Q7Z6I5 190 aa11.67□□□□□ -0.54
CHMP3-207ENST00000485465 MAPKAPK5-AS1Q8N8E1 139 aa11.67□□□□□ -0.54
CHMP3-207ENST00000485465 IGLV4-69A0A075B6H9 119 aa11.66□□□□□ -0.54
CHMP3-207ENST00000485465 IGHV3OR16-9A0A0B4J2B5 98 aa11.66□□□□□ -0.54
CHMP3-207ENST00000485465 RTL8CO15255 209 aa11.66□□□□□ -0.54
CHMP3-207ENST00000485465 IGLC3P0DOY3 106 aa11.66□□□□□ -0.54
CHMP3-207ENST00000485465 HERVK_113P63121 156 aa11.66□□□□□ -0.54
CHMP3-207ENST00000485465 GEMIN7Q9H840 131 aaKnown RBP11.66□□□□□ -0.54
CHMP3-207ENST00000485465 MRPL35Q9NZE8 188 aaKnown RBP11.66□□□□□ -0.54
CHMP3-207ENST00000485465 DNAH10Q8IVF4 4471 aa11.65□□□□□ -0.54
CHMP3-207ENST00000485465 F8VRH5 84 aa11.65□□□□□ -0.54
CHMP3-207ENST00000485465 PET117Q6UWS5 81 aa11.65□□□□□ -0.54
CHMP3-207ENST00000485465 COX7A2LO14548 114 aa11.64□□□□□ -0.55
CHMP3-207ENST00000485465 C5orf38Q86SI9 138 aa11.64□□□□□ -0.55
CHMP3-207ENST00000485465 CHAC1Q9BUX1 264 aa11.64□□□□□ -0.55
CHMP3-207ENST00000485465 C11orf86A6NJI1 115 aa11.63□□□□□ -0.55
CHMP3-207ENST00000485465 FRAS1Q86XX4 4008 aa11.62□□□□□ -0.55
CHMP3-207ENST00000485465 IGLV5-45A0A087WSX0 123 aa11.62□□□□□ -0.55
CHMP3-207ENST00000485465 LINC01545Q5VT33 79 aa11.62□□□□□ -0.55
CHMP3-207ENST00000485465 LINC00469Q8N7U9 141 aa11.62□□□□□ -0.55
CHMP3-207ENST00000485465 PMCHL2Q9BQD1 86 aa11.62□□□□□ -0.55
CHMP3-207ENST00000485465 CDKN2A-AS1Q9UH64 79 aa11.62□□□□□ -0.55
CHMP3-207ENST00000485465 A0A087WZ39 114 aa11.61□□□□□ -0.55
CHMP3-207ENST00000485465 MALP21145 153 aa11.61□□□□□ -0.55
CHMP3-207ENST00000485465 OR10D4PQ8NGN7 298 aa11.61□□□□□ -0.55
CHMP3-207ENST00000485465 DNAH17Q9UFH2 4485 aa11.6□□□□□ -0.55
CHMP3-207ENST00000485465 LRCOL1A6NCL2 159 aa11.6□□□□□ -0.55
CHMP3-207ENST00000485465 DPM2O94777 84 aa11.6□□□□□ -0.55
CHMP3-207ENST00000485465 ZNF22P17026 224 aaPredicted RBP11.6□□□□□ -0.55
CHMP3-207ENST00000485465 PLNP26678 52 aa11.6□□□□□ -0.55
CHMP3-207ENST00000485465 LCE2DQ5TA82 110 aaPredicted RBP11.6□□□□□ -0.55
CHMP3-207ENST00000485465 LINC01561Q8N1V8 128 aa11.6□□□□□ -0.55
CHMP3-207ENST00000485465 USP17L23D6RBM5 183 aa11.59□□□□□ -0.55
CHMP3-207ENST00000485465 LECT2O14960 151 aa11.59□□□□□ -0.55
CHMP3-207ENST00000485465 WFDC2Q14508 124 aa11.59□□□□□ -0.55
CHMP3-207ENST00000485465 CFAP161Q6P656 301 aa11.59□□□□□ -0.55
CHMP3-207ENST00000485465 IGHV1-58A0A0C4DH39 117 aa11.58□□□□□ -0.56
CHMP3-207ENST00000485465 C20orf202A1L168 122 aa11.58□□□□□ -0.56
CHMP3-207ENST00000485465 H3BRM9 83 aa11.58□□□□□ -0.56
CHMP3-207ENST00000485465 IGKCP01834 107 aa11.58□□□□□ -0.56
CHMP3-207ENST00000485465 TNP2Q05952 138 aa11.58□□□□□ -0.56
CHMP3-207ENST00000485465 TMEM170BQ5T4T1 132 aa11.58□□□□□ -0.56
CHMP3-207ENST00000485465 C15orf56Q8N910 161 aa11.58□□□□□ -0.56
CHMP3-207ENST00000485465 RYR3Q15413 4870 aa11.58□□□□□ -0.56
CHMP3-207ENST00000485465 A0A087WTM6 91 aa11.57□□□□□ -0.56
CHMP3-207ENST00000485465 APOMO95445 188 aa11.57□□□□□ -0.56
CHMP3-207ENST00000485465 IGHV3-64A0A075B6Q5 118 aa11.56□□□□□ -0.56
CHMP3-207ENST00000485465 LINC00336Q6ZUF6 198 aa11.56□□□□□ -0.56
CHMP3-207ENST00000485465 SMIM1B2RUZ4 78 aa11.55□□□□□ -0.56
CHMP3-207ENST00000485465 SPINK8P0C7L1 97 aa11.55□□□□□ -0.56
CHMP3-207ENST00000485465 TMEM223A0PJW6 202 aa11.54□□□□□ -0.56
CHMP3-207ENST00000485465 C14orf177Q52M58 125 aa11.54□□□□□ -0.56
CHMP3-207ENST00000485465 ORAOV1Q8WV07 137 aa11.54□□□□□ -0.56
CHMP3-207ENST00000485465 GVQW2A0A096LPI5 108 aaPredicted RBP11.53□□□□□ -0.56
CHMP3-207ENST00000485465 AKR1D1P51857 326 aa11.53□□□□□ -0.56
CHMP3-207ENST00000485465 HIGD2BQ4VC39 106 aa11.53□□□□□ -0.56
CHMP3-207ENST00000485465 FAT2Q9NYQ8 4349 aa11.52□□□□□ -0.57
CHMP3-207ENST00000485465 hDV102S1A0JD36 115 aa11.52□□□□□ -0.57
CHMP3-207ENST00000485465 EREGO14944 169 aa11.52□□□□□ -0.57
CHMP3-207ENST00000485465 SCGB1D1O95968 90 aa11.52□□□□□ -0.57
CHMP3-207ENST00000485465 Q8N814 137 aa11.52□□□□□ -0.57
CHMP3-207ENST00000485465 IGLV5-39A0A0G2JS06 123 aa11.51□□□□□ -0.57
CHMP3-207ENST00000485465 ZNF561-AS1K7EIQ3 104 aa11.51□□□□□ -0.57
CHMP3-207ENST00000485465 SPAG11BQ08648 103 aa11.51□□□□□ -0.57
CHMP3-207ENST00000485465 KIAA0087Q14695 138 aa11.5□□□□□ -0.57
CHMP3-207ENST00000485465 ATOH7Q8N100 152 aa11.5□□□□□ -0.57
CHMP3-207ENST00000485465 LINC00526Q96FQ7 95 aa11.5□□□□□ -0.57
CHMP3-207ENST00000485465 TOMM7Q9P0U1 55 aa11.5□□□□□ -0.57
CHMP3-207ENST00000485465 PRSS2P07478 247 aa11.48□□□□□ -0.57
CHMP3-207ENST00000485465 HERVK_113P61574 105 aa11.48□□□□□ -0.57
CHMP3-207ENST00000485465 JOSD1Q15040 202 aaPredicted RBP11.48□□□□□ -0.57
CHMP3-207ENST00000485465 Q8IZM0 81 aa11.48□□□□□ -0.57
CHMP3-207ENST00000485465 STPG4Q8N801 248 aa11.48□□□□□ -0.57
CHMP3-207ENST00000485465 COX7B2Q8TF08 81 aa11.48□□□□□ -0.57
CHMP3-207ENST00000485465 NTN5Q8WTR8 489 aaPredicted RBP11.48□□□□□ -0.57
CHMP3-207ENST00000485465 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.47□□□□□ -0.57
CHMP3-207ENST00000485465 C6orf226Q5I0X4 101 aa11.47□□□□□ -0.57
CHMP3-207ENST00000485465 C2orf48Q96LS8 159 aa11.47□□□□□ -0.57
CHMP3-207ENST00000485465 SLPIP03973 132 aa11.46□□□□□ -0.57
CHMP3-207ENST00000485465 DNAH11Q96DT5 4516 aa11.46□□□□□ -0.57
CHMP3-207ENST00000485465 F8WDY8 70 aa11.45□□□□□ -0.58
CHMP3-207ENST00000485465 LEPROTO15243 131 aa11.45□□□□□ -0.58
CHMP3-207ENST00000485465 E9PLD3 99 aa11.44□□□□□ -0.58
CHMP3-207ENST00000485465 CNBPP62633 177 aaKnown RBP11.44□□□□□ -0.58
CHMP3-207ENST00000485465 PLEKHB2Q96CS7 222 aa11.44□□□□□ -0.58
CHMP3-207ENST00000485465 CAMK2N2Q96S95 79 aa11.44□□□□□ -0.58
CHMP3-207ENST00000485465 LOC105371267A0A1B0GV96 52 aa11.43□□□□□ -0.58
CHMP3-207ENST00000485465 A0A1B0GVY2 172 aa11.43□□□□□ -0.58
CHMP3-207ENST00000485465 CKS1BP61024 79 aa11.43□□□□□ -0.58
CHMP3-207ENST00000485465 SYCNQ0VAF6 134 aa11.43□□□□□ -0.58
CHMP3-207ENST00000485465 PYY3Q5JQD4 70 aa11.43□□□□□ -0.58
CHMP3-207ENST00000485465 C2orf82Q6UX34 121 aa11.43□□□□□ -0.58
CHMP3-207ENST00000485465 PKD1P98161 4303 aa11.43□□□□□ -0.58
CHMP3-207ENST00000485465 NDUFA1O15239 70 aa11.42□□□□□ -0.58
CHMP3-207ENST00000485465 FUSP35637 526 aaKnown RBP eCLIP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms