RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 S100A1P23297 94 aa3.95□□□□□ -1.78
PTCD3-215ENST00000484203 CKS2P33552 79 aa3.95□□□□□ -1.78
PTCD3-215ENST00000484203 HBBP68871 147 aa3.95□□□□□ -1.78
PTCD3-215ENST00000484203 PNRC1Q12796 327 aaPredicted RBP3.95□□□□□ -1.78
PTCD3-215ENST00000484203 FAM104BQ5XKR9 115 aa3.95□□□□□ -1.78
PTCD3-215ENST00000484203 ATP5L2Q7Z4Y8 100 aa3.95□□□□□ -1.78
PTCD3-215ENST00000484203 AMN1Q8IY45 258 aa3.95□□□□□ -1.78
PTCD3-215ENST00000484203 ZNF664Q8N3J9 261 aa3.95□□□□□ -1.78
PTCD3-215ENST00000484203 C7orf33Q8WU49 177 aa3.95□□□□□ -1.78
PTCD3-215ENST00000484203 TIMM21Q9BVV7 248 aa3.95□□□□□ -1.78
PTCD3-215ENST00000484203 CDC42SE2Q9NRR3 84 aa3.95□□□□□ -1.78
PTCD3-215ENST00000484203 TMEM242Q9NWH2 141 aa3.95□□□□□ -1.78
PTCD3-215ENST00000484203 LINC00959A0A1B0GUT2 108 aa3.94□□□□□ -1.78
PTCD3-215ENST00000484203 F8WDY8 70 aa3.94□□□□□ -1.78
PTCD3-215ENST00000484203 APOMO95445 188 aa3.94□□□□□ -1.78
PTCD3-215ENST00000484203 XCL1P47992 114 aa3.94□□□□□ -1.78
PTCD3-215ENST00000484203 NDUFA5Q16718 116 aa3.94□□□□□ -1.78
PTCD3-215ENST00000484203 SERTAD4-AS1Q5TG53 156 aa3.94□□□□□ -1.78
PTCD3-215ENST00000484203 SPANXA1Q9NS26 97 aa3.94□□□□□ -1.78
PTCD3-215ENST00000484203 LAMTOR2Q9Y2Q5 125 aa3.94□□□□□ -1.78
PTCD3-215ENST00000484203 COX7A2LO14548 114 aa3.93□□□□□ -1.78
PTCD3-215ENST00000484203 MT-ND4LP03901 98 aa3.93□□□□□ -1.78
PTCD3-215ENST00000484203 RAB5AP20339 215 aa3.93□□□□□ -1.78
PTCD3-215ENST00000484203 G0S2P27469 103 aa3.93□□□□□ -1.78
PTCD3-215ENST00000484203 CAMPP49913 170 aa3.93□□□□□ -1.78
PTCD3-215ENST00000484203 IFITM2Q01629 132 aa3.93□□□□□ -1.78
PTCD3-215ENST00000484203 Q6ZRU5 148 aa3.93□□□□□ -1.78
PTCD3-215ENST00000484203 ORMDL3Q8N138 153 aa3.93□□□□□ -1.78
PTCD3-215ENST00000484203 C15orf56Q8N910 161 aa3.93□□□□□ -1.78
PTCD3-215ENST00000484203 SPACA4Q8TDM5 124 aa3.93□□□□□ -1.78
PTCD3-215ENST00000484203 URB1-AS1Q96HZ7 61 aa3.93□□□□□ -1.78
PTCD3-215ENST00000484203 PLAC8Q9NZF1 115 aa3.93□□□□□ -1.78
PTCD3-215ENST00000484203 A0A087WYN8 130 aa3.92□□□□□ -1.78
PTCD3-215ENST00000484203 MRPS36P82909 103 aaKnown RBP3.92□□□□□ -1.78
PTCD3-215ENST00000484203 COX6A2Q02221 97 aa3.92□□□□□ -1.78
PTCD3-215ENST00000484203 SYCNQ0VAF6 134 aa3.92□□□□□ -1.78
PTCD3-215ENST00000484203 MRPL51Q4U2R6 128 aaKnown RBP3.92□□□□□ -1.78
PTCD3-215ENST00000484203 HIGD2BQ4VC39 106 aa3.92□□□□□ -1.78
PTCD3-215ENST00000484203 SLC7A5P1Q8MH63 180 aa3.92□□□□□ -1.78
PTCD3-215ENST00000484203 CARD19Q96LW7 228 aa3.92□□□□□ -1.78
PTCD3-215ENST00000484203 SMIM2Q9BVW6 85 aa3.92□□□□□ -1.78
PTCD3-215ENST00000484203 UBE2D4Q9Y2X8 147 aa3.92□□□□□ -1.78
PTCD3-215ENST00000484203 IGLV4-69A0A075B6H9 119 aa3.91□□□□□ -1.78
PTCD3-215ENST00000484203 IGKV2D-30A0A075B6S6 120 aa3.91□□□□□ -1.78
PTCD3-215ENST00000484203 TRAV13-1A0A0B4J241 112 aa3.91□□□□□ -1.78
PTCD3-215ENST00000484203 A0A1B0GXF2 115 aa3.91□□□□□ -1.78
PTCD3-215ENST00000484203 C9JQL5 133 aa3.91□□□□□ -1.78
PTCD3-215ENST00000484203 D6R8Y8 96 aa3.91□□□□□ -1.78
PTCD3-215ENST00000484203 K7EMI3 77 aa3.91□□□□□ -1.78
PTCD3-215ENST00000484203 KRTAP10-4P60372 401 aaPredicted RBP3.91□□□□□ -1.78
PTCD3-215ENST00000484203 MAJINQ3KP22 176 aa3.91□□□□□ -1.78
PTCD3-215ENST00000484203 TMEM136Q6ZRR5 245 aa3.91□□□□□ -1.78
PTCD3-215ENST00000484203 OR10D4PQ8NGN7 298 aa3.91□□□□□ -1.78
PTCD3-215ENST00000484203 C2orf48Q96LS8 159 aa3.91□□□□□ -1.78
PTCD3-215ENST00000484203 LOC107984640A0A0U1RRK4 108 aa3.9□□□□□ -1.79
PTCD3-215ENST00000484203 SMKR1H3BMG3 65 aa3.9□□□□□ -1.79
PTCD3-215ENST00000484203 GAS8-AS1O95177 125 aa3.9□□□□□ -1.79
PTCD3-215ENST00000484203 IFI27P40305 119 aaPredicted RBP3.9□□□□□ -1.79
PTCD3-215ENST00000484203 PAPPA-AS1Q5QFB9 102 aa3.9□□□□□ -1.79
PTCD3-215ENST00000484203 MRPL54Q6P161 138 aaKnown RBP3.9□□□□□ -1.79
PTCD3-215ENST00000484203 PRR26Q8N8Z3 221 aa3.9□□□□□ -1.79
PTCD3-215ENST00000484203 CAMK2N2Q96S95 79 aa3.9□□□□□ -1.79
PTCD3-215ENST00000484203 IMMP2LQ96T52 175 aa3.9□□□□□ -1.79
PTCD3-215ENST00000484203 PYGO1Q9Y3Y4 419 aa3.9□□□□□ -1.79
PTCD3-215ENST00000484203 TGIF2-C20orf24A0A0A6YYL0 155 aa3.89□□□□□ -1.79
PTCD3-215ENST00000484203 IGKV2-24A0A0C4DH68 120 aa3.89□□□□□ -1.79
PTCD3-215ENST00000484203 LINC01549A6NIU2 74 aa3.89□□□□□ -1.79
PTCD3-215ENST00000484203 PRSS47A8MTI9 375 aa3.89□□□□□ -1.79
PTCD3-215ENST00000484203 ORMDL2Q53FV1 153 aa3.89□□□□□ -1.79
PTCD3-215ENST00000484203 UQCC3Q6UW78 93 aa3.89□□□□□ -1.79
PTCD3-215ENST00000484203 Q6ZN92 141 aa3.89□□□□□ -1.79
PTCD3-215ENST00000484203 STPG4Q8N801 248 aa3.89□□□□□ -1.79
PTCD3-215ENST00000484203 PRELID3AQ96N28 172 aa3.89□□□□□ -1.79
PTCD3-215ENST00000484203 C2orf88Q9BSF0 95 aa3.89□□□□□ -1.79
PTCD3-215ENST00000484203 MAP1LC3AQ9H492 121 aa3.89□□□□□ -1.79
PTCD3-215ENST00000484203 TRAV9-1A0A075B6T8 112 aa3.88□□□□□ -1.79
PTCD3-215ENST00000484203 IFITM10A6NMD0 228 aa3.88□□□□□ -1.79
PTCD3-215ENST00000484203 PANO1I0J062 215 aa3.88□□□□□ -1.79
PTCD3-215ENST00000484203 NPYP01303 97 aa3.88□□□□□ -1.79
PTCD3-215ENST00000484203 CHTF8P0CG12 524 aa3.88□□□□□ -1.79
PTCD3-215ENST00000484203 SEC11AP67812 179 aa3.88□□□□□ -1.79
PTCD3-215ENST00000484203 SPAG11BQ08648 103 aa3.88□□□□□ -1.79
PTCD3-215ENST00000484203 CLLU1Q5K131 121 aa3.88□□□□□ -1.79
PTCD3-215ENST00000484203 LCE1AQ5T7P2 110 aa3.88□□□□□ -1.79
PTCD3-215ENST00000484203 Q6ZRP5 223 aa3.88□□□□□ -1.79
PTCD3-215ENST00000484203 Q6ZUT4 128 aa3.88□□□□□ -1.79
PTCD3-215ENST00000484203 LINC01561Q8N1V8 128 aa3.88□□□□□ -1.79
PTCD3-215ENST00000484203 NXT2Q9NPJ8 142 aaKnown RBP3.88□□□□□ -1.79
PTCD3-215ENST00000484203 CYSLTR1Q9Y271 337 aa3.88□□□□□ -1.79
PTCD3-215ENST00000484203 A0A087WZ39 114 aa3.87□□□□□ -1.79
PTCD3-215ENST00000484203 A0A096LNI7 61 aa3.87□□□□□ -1.79
PTCD3-215ENST00000484203 IGHV3OR16-9A0A0B4J2B5 98 aa3.87□□□□□ -1.79
PTCD3-215ENST00000484203 NDUFA1O15239 70 aa3.87□□□□□ -1.79
PTCD3-215ENST00000484203 COX19Q49B96 90 aa3.87□□□□□ -1.79
PTCD3-215ENST00000484203 REG3GQ6UW15 175 aa3.87□□□□□ -1.79
PTCD3-215ENST00000484203 TEX43Q6ZNM6 134 aa3.87□□□□□ -1.79
PTCD3-215ENST00000484203 C5orf38Q86SI9 138 aa3.87□□□□□ -1.79
PTCD3-215ENST00000484203 TMEM141Q96I45 108 aa3.87□□□□□ -1.79
PTCD3-215ENST00000484203 MRPL35Q9NZE8 188 aaKnown RBP3.87□□□□□ -1.79
PTCD3-215ENST00000484203 S100PP25815 95 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms