RNA–Protein interactions for RNA: ENST00000482519.1

VAMP4-204, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 3

Gene VAMP4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-204ENST00000482519 KRTAP10-4P60372 401 aaPredicted RBP10.52□□□□□ -0.73
VAMP4-204ENST00000482519 TRAV9-1A0A075B6T8 112 aa10.51□□□□□ -0.73
VAMP4-204ENST00000482519 A0A096LNI7 61 aa10.51□□□□□ -0.73
VAMP4-204ENST00000482519 CAMK2N2Q96S95 79 aa10.51□□□□□ -0.73
VAMP4-204ENST00000482519 CYSLTR1Q9Y271 337 aa10.51□□□□□ -0.73
VAMP4-204ENST00000482519 PYGO1Q9Y3Y4 419 aa10.51□□□□□ -0.73
VAMP4-204ENST00000482519 IGLV4-3A0A075B6K6 122 aa10.5□□□□□ -0.73
VAMP4-204ENST00000482519 J3QL48 77 aa10.5□□□□□ -0.73
VAMP4-204ENST00000482519 ORMDL2Q53FV1 153 aa10.5□□□□□ -0.73
VAMP4-204ENST00000482519 C2orf66Q6UXQ4 117 aa10.5□□□□□ -0.73
VAMP4-204ENST00000482519 RPS10P5Q9NQ39 176 aa10.5□□□□□ -0.73
VAMP4-204ENST00000482519 SPAG11BQ08648 103 aa10.49□□□□□ -0.73
VAMP4-204ENST00000482519 Q6ZRU5 148 aa10.49□□□□□ -0.73
VAMP4-204ENST00000482519 STPG4Q8N801 248 aa10.49□□□□□ -0.73
VAMP4-204ENST00000482519 TMEM141Q96I45 108 aa10.49□□□□□ -0.73
VAMP4-204ENST00000482519 NXT2Q9NPJ8 142 aaKnown RBP10.49□□□□□ -0.73
VAMP4-204ENST00000482519 PKIGQ9Y2B9 76 aa10.49□□□□□ -0.73
VAMP4-204ENST00000482519 C10orf91Q5T1B1 145 aa10.48□□□□□ -0.73
VAMP4-204ENST00000482519 TEX43Q6ZNM6 134 aa10.48□□□□□ -0.73
VAMP4-204ENST00000482519 ORAOV1Q8WV07 137 aa10.48□□□□□ -0.73
VAMP4-204ENST00000482519 PLAC8Q9NZF1 115 aa10.48□□□□□ -0.73
VAMP4-204ENST00000482519 TGIF2-C20orf24A0A0A6YYL0 155 aa10.47□□□□□ -0.73
VAMP4-204ENST00000482519 IGHV3OR16-9A0A0B4J2B5 98 aa10.47□□□□□ -0.73
VAMP4-204ENST00000482519 K7EMI3 77 aa10.47□□□□□ -0.73
VAMP4-204ENST00000482519 GAGE2BQ13066 116 aa10.47□□□□□ -0.73
VAMP4-204ENST00000482519 ZC2HC1BQ5TFG8 222 aa10.47□□□□□ -0.73
VAMP4-204ENST00000482519 Q6ZN92 141 aa10.47□□□□□ -0.73
VAMP4-204ENST00000482519 GNB1LQ9BYB4 327 aa10.47□□□□□ -0.73
VAMP4-204ENST00000482519 LINC00474Q9P2X8 69 aa10.47□□□□□ -0.73
VAMP4-204ENST00000482519 CARHSP1Q9Y2V2 147 aaKnown RBP10.47□□□□□ -0.73
VAMP4-204ENST00000482519 HERC1Q15751 4861 aa10.47□□□□□ -0.73
VAMP4-204ENST00000482519 RHEBQ15382 184 aa10.46□□□□□ -0.73
VAMP4-204ENST00000482519 OR10D4PQ8NGN7 298 aa10.46□□□□□ -0.73
VAMP4-204ENST00000482519 C7orf33Q8WU49 177 aa10.46□□□□□ -0.73
VAMP4-204ENST00000482519 C2orf48Q96LS8 159 aa10.46□□□□□ -0.73
VAMP4-204ENST00000482519 C2orf88Q9BSF0 95 aa10.46□□□□□ -0.73
VAMP4-204ENST00000482519 VCX2Q9H322 139 aa10.46□□□□□ -0.73
VAMP4-204ENST00000482519 A0A0J9YXV3 536 aa10.45□□□□□ -0.74
VAMP4-204ENST00000482519 LOC107984640A0A0U1RRK4 108 aa10.45□□□□□ -0.74
VAMP4-204ENST00000482519 LINC00242Q5T6M2 205 aa10.45□□□□□ -0.74
VAMP4-204ENST00000482519 HNRNPA3P51991 378 aaKnown RBP10.44□□□□□ -0.74
VAMP4-204ENST00000482519 APOC3P02656 99 aa10.43□□□□□ -0.74
VAMP4-204ENST00000482519 G0S2P27469 103 aa10.43□□□□□ -0.74
VAMP4-204ENST00000482519 UBE2D1P51668 147 aa10.43□□□□□ -0.74
VAMP4-204ENST00000482519 PTTG1IPP53801 180 aa10.43□□□□□ -0.74
VAMP4-204ENST00000482519 RPL18AQ02543 176 aaKnown RBP10.43□□□□□ -0.74
VAMP4-204ENST00000482519 FABP9Q0Z7S8 132 aa10.43□□□□□ -0.74
VAMP4-204ENST00000482519 ALKBH7Q9BT30 221 aaPredicted RBP10.43□□□□□ -0.74
VAMP4-204ENST00000482519 MRPL18Q9H0U6 180 aaKnown RBP10.43□□□□□ -0.74
VAMP4-204ENST00000482519 A0A087WZ39 114 aa10.42□□□□□ -0.74
VAMP4-204ENST00000482519 IGIPA6NJ69 53 aa10.42□□□□□ -0.74
VAMP4-204ENST00000482519 COX19Q49B96 90 aa10.42□□□□□ -0.74
VAMP4-204ENST00000482519 KRTAP29-1A8MX34 341 aaPredicted RBP10.41□□□□□ -0.74
VAMP4-204ENST00000482519 NDUFA1O15239 70 aa10.41□□□□□ -0.74
VAMP4-204ENST00000482519 MT-ND6P03923 174 aa10.41□□□□□ -0.74
VAMP4-204ENST00000482519 LINC00173Q6ZV60 143 aa10.41□□□□□ -0.74
VAMP4-204ENST00000482519 AMELXQ99217 191 aa10.41□□□□□ -0.74
VAMP4-204ENST00000482519 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.4□□□□□ -0.74
VAMP4-204ENST00000482519 NDUFA5Q16718 116 aa10.4□□□□□ -0.74
VAMP4-204ENST00000482519 PAPPA-AS1Q5QFB9 102 aa10.4□□□□□ -0.74
VAMP4-204ENST00000482519 UNQ6190/PRO20217Q6UXQ8 127 aa10.4□□□□□ -0.74
VAMP4-204ENST00000482519 TOMM6Q96B49 74 aa10.4□□□□□ -0.74
VAMP4-204ENST00000482519 SCGB3A1Q96QR1 104 aa10.4□□□□□ -0.74
VAMP4-204ENST00000482519 NPSP0C0P6 89 aa10.39□□□□□ -0.75
VAMP4-204ENST00000482519 RNF151Q2KHN1 245 aa10.39□□□□□ -0.75
VAMP4-204ENST00000482519 C10orf25Q5T742 122 aa10.39□□□□□ -0.75
VAMP4-204ENST00000482519 MRPL35Q9NZE8 188 aaKnown RBP10.39□□□□□ -0.75
VAMP4-204ENST00000482519 F8WDY8 70 aa10.38□□□□□ -0.75
VAMP4-204ENST00000482519 FA2HQ7L5A8 372 aa10.38□□□□□ -0.75
VAMP4-204ENST00000482519 SVBPQ8N300 66 aa10.38□□□□□ -0.75
VAMP4-204ENST00000482519 TIMM17AQ99595 171 aa10.38□□□□□ -0.75
VAMP4-204ENST00000482519 SMCO4Q9NRQ5 59 aa10.38□□□□□ -0.75
VAMP4-204ENST00000482519 PKHD1L1Q86WI1 4243 aa10.38□□□□□ -0.75
VAMP4-204ENST00000482519 SNAPINO95295 136 aa10.37□□□□□ -0.75
VAMP4-204ENST00000482519 ERASQ7Z444 233 aa10.37□□□□□ -0.75
VAMP4-204ENST00000482519 GEMIN7Q9H840 131 aaKnown RBP10.37□□□□□ -0.75
VAMP4-204ENST00000482519 TOMM7Q9P0U1 55 aa10.37□□□□□ -0.75
VAMP4-204ENST00000482519 TRAPPC1Q9Y5R8 145 aa10.37□□□□□ -0.75
VAMP4-204ENST00000482519 LRP1Q07954 4544 aaKnown RBP10.36□□□□□ -0.75
VAMP4-204ENST00000482519 A0A1W2PNN7 141 aa10.36□□□□□ -0.75
VAMP4-204ENST00000482519 OXTP01178 125 aa10.36□□□□□ -0.75
VAMP4-204ENST00000482519 KIAA0087Q14695 138 aa10.36□□□□□ -0.75
VAMP4-204ENST00000482519 C2orf82Q6UX34 121 aa10.36□□□□□ -0.75
VAMP4-204ENST00000482519 C6orf48Q9UBA6 75 aa10.36□□□□□ -0.75
VAMP4-204ENST00000482519 PRSS2P07478 247 aa10.35□□□□□ -0.75
VAMP4-204ENST00000482519 HERVK_113P63121 156 aa10.35□□□□□ -0.75
VAMP4-204ENST00000482519 PRR3P79522 188 aaKnown RBP10.35□□□□□ -0.75
VAMP4-204ENST00000482519 C9orf116Q5BN46 136 aaPredicted RBP10.35□□□□□ -0.75
VAMP4-204ENST00000482519 LINC01546A6NGU7 62 aa10.34□□□□□ -0.75
VAMP4-204ENST00000482519 SEC11AP67812 179 aa10.34□□□□□ -0.75
VAMP4-204ENST00000482519 GAGE2EQ4V326 116 aa10.34□□□□□ -0.75
VAMP4-204ENST00000482519 LINC01561Q8N1V8 128 aa10.34□□□□□ -0.75
VAMP4-204ENST00000482519 PACRGQ96M98 296 aaPredicted RBP10.34□□□□□ -0.75
VAMP4-204ENST00000482519 GAGE2DQ9UEU5 116 aa10.34□□□□□ -0.75
VAMP4-204ENST00000482519 CDKN2A-AS1Q9UH64 79 aa10.34□□□□□ -0.75
VAMP4-204ENST00000482519 CKS1BP61024 79 aa10.33□□□□□ -0.76
VAMP4-204ENST00000482519 C6orf226Q5I0X4 101 aa10.33□□□□□ -0.76
VAMP4-204ENST00000482519 Q6ZRP5 223 aa10.33□□□□□ -0.76
VAMP4-204ENST00000482519 FAM19A3Q7Z5A8 133 aa10.33□□□□□ -0.76
VAMP4-204ENST00000482519 LINC01549A6NIU2 74 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms