RNA–Protein interactions for RNA: ENST00000481474.5

TRIM27-205, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best)

Gene TRIM27, Length 7,006 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-205ENST00000481474 PRR3P79522 188 aaKnown RBP8.57□□□□□ -1.04
TRIM27-205ENST00000481474 C20orf173Q96LM9 149 aa8.57□□□□□ -1.04
TRIM27-205ENST00000481474 RBX1P62877 108 aa8.57□□□□□ -1.04
TRIM27-205ENST00000481474 TNFRSF13BO14836 293 aaPredicted RBP8.56□□□□□ -1.04
TRIM27-205ENST00000481474 FAM19A3Q7Z5A8 133 aa8.56□□□□□ -1.04
TRIM27-205ENST00000481474 Q9BRP9 147 aa8.56□□□□□ -1.04
TRIM27-205ENST00000481474 RAI1Q7Z5J4 1906 aaPredicted RBP8.56□□□□□ -1.04
TRIM27-205ENST00000481474 EBI3Q14213 229 aa8.56□□□□□ -1.04
TRIM27-205ENST00000481474 ZSWIM8A7E2V4 1837 aa8.56□□□□□ -1.04
TRIM27-205ENST00000481474 A0A0J9YXY3 114 aa8.56□□□□□ -1.04
TRIM27-205ENST00000481474 M0R378 163 aa8.56□□□□□ -1.04
TRIM27-205ENST00000481474 LINC00643Q86TS7 51 aa8.55□□□□□ -1.04
TRIM27-205ENST00000481474 Q8NA96 180 aa8.55□□□□□ -1.04
TRIM27-205ENST00000481474 DHRS4-AS1Q9P1J3 65 aa8.55□□□□□ -1.04
TRIM27-205ENST00000481474 LENEPQ9Y5L5 61 aa8.55□□□□□ -1.04
TRIM27-205ENST00000481474 Q6ZS46 218 aa8.54□□□□□ -1.04
TRIM27-205ENST00000481474 SPANXB1Q9NS25 103 aaPredicted RBP8.54□□□□□ -1.04
TRIM27-205ENST00000481474 PDE6GP18545 87 aa8.54□□□□□ -1.04
TRIM27-205ENST00000481474 PLXNA3P51805 1871 aa8.53□□□□□ -1.04
TRIM27-205ENST00000481474 MGAMO43451 1857 aa8.53□□□□□ -1.04
TRIM27-205ENST00000481474 PLXNA4Q9HCM2 1894 aa8.52□□□□□ -1.05
TRIM27-205ENST00000481474 KRTAP10-9P60411 292 aa8.52□□□□□ -1.05
TRIM27-205ENST00000481474 LELP1Q5T871 98 aa8.52□□□□□ -1.05
TRIM27-205ENST00000481474 DENND4CQ5VZ89 1909 aa8.52□□□□□ -1.05
TRIM27-205ENST00000481474 ANAPC1Q9H1A4 1944 aa8.52□□□□□ -1.05
TRIM27-205ENST00000481474 NDUFA7O95182 113 aa8.52□□□□□ -1.05
TRIM27-205ENST00000481474 C20orf203Q8NBC4 194 aa8.52□□□□□ -1.05
TRIM27-205ENST00000481474 APLNQ9ULZ1 77 aa8.52□□□□□ -1.05
TRIM27-205ENST00000481474 CYSRT1A8MQ03 144 aa8.51□□□□□ -1.05
TRIM27-205ENST00000481474 HCG22E2RYF7 251 aa8.51□□□□□ -1.05
TRIM27-205ENST00000481474 CACNA1AO00555 2505 aa8.51□□□□□ -1.05
TRIM27-205ENST00000481474 ZNF524Q96C55 264 aa8.51□□□□□ -1.05
TRIM27-205ENST00000481474 ACANP16112 2415 aa8.51□□□□□ -1.05
TRIM27-205ENST00000481474 UNQ6190/PRO20217Q6UXQ8 127 aa8.5□□□□□ -1.05
TRIM27-205ENST00000481474 LRRC75A-AS1Q8N1F1 130 aa8.5□□□□□ -1.05
TRIM27-205ENST00000481474 MOBPQ13875 183 aa8.49□□□□□ -1.05
TRIM27-205ENST00000481474 E9PLD3 99 aa8.49□□□□□ -1.05
TRIM27-205ENST00000481474 LINC00242Q5T6M2 205 aa8.49□□□□□ -1.05
TRIM27-205ENST00000481474 EP400Q96L91 3159 aa8.49□□□□□ -1.05
TRIM27-205ENST00000481474 TYMSOSQ8TAI1 123 aa8.49□□□□□ -1.05
TRIM27-205ENST00000481474 LINC00308Q8TCZ7 52 aa8.49□□□□□ -1.05
TRIM27-205ENST00000481474 MRPS12O15235 138 aaKnown RBP8.48□□□□□ -1.05
TRIM27-205ENST00000481474 M0R2T5 61 aa8.48□□□□□ -1.05
TRIM27-205ENST00000481474 LINC00959A0A1B0GUT2 108 aa8.48□□□□□ -1.05
TRIM27-205ENST00000481474 SMR3BP02814 79 aaPredicted RBP8.48□□□□□ -1.05
TRIM27-205ENST00000481474 ZNF80P51504 273 aaPredicted RBP8.48□□□□□ -1.05
TRIM27-205ENST00000481474 A0A087WSZ3 146 aa8.48□□□□□ -1.05
TRIM27-205ENST00000481474 A0A1B0GXF2 115 aa8.48□□□□□ -1.05
TRIM27-205ENST00000481474 CDIP1Q9H305 208 aa8.48□□□□□ -1.05
TRIM27-205ENST00000481474 LMO4P61968 165 aa8.48□□□□□ -1.05
TRIM27-205ENST00000481474 VPREB1P12018 145 aa8.48□□□□□ -1.05
TRIM27-205ENST00000481474 LIMD2Q9BT23 127 aa8.48□□□□□ -1.05
TRIM27-205ENST00000481474 SMIM11BQ8TCY0 68 aa8.47□□□□□ -1.05
TRIM27-205ENST00000481474 CD164L2Q6UWJ8 174 aa8.47□□□□□ -1.05
TRIM27-205ENST00000481474 EDN2P20800 178 aa8.47□□□□□ -1.05
TRIM27-205ENST00000481474 WDR90Q96KV7 1748 aa8.47□□□□□ -1.05
TRIM27-205ENST00000481474 LRRC37A2A6NM11 1700 aa8.46□□□□□ -1.05
TRIM27-205ENST00000481474 H0Y9P7 68 aa8.46□□□□□ -1.05
TRIM27-205ENST00000481474 C9orf92A6NGG3 77 aa8.46□□□□□ -1.06
TRIM27-205ENST00000481474 A8MTW9 85 aa8.46□□□□□ -1.06
TRIM27-205ENST00000481474 SPAG11AQ6PDA7 123 aa8.46□□□□□ -1.06
TRIM27-205ENST00000481474 NOTCH4Q99466 2003 aa8.45□□□□□ -1.06
TRIM27-205ENST00000481474 ATP11AUNQ6ZP68 121 aa8.45□□□□□ -1.06
TRIM27-205ENST00000481474 ZNF702PQ9H963 129 aa8.45□□□□□ -1.06
TRIM27-205ENST00000481474 Q6ZS49 121 aa8.45□□□□□ -1.06
TRIM27-205ENST00000481474 TRIAP1O43715 76 aa8.45□□□□□ -1.06
TRIM27-205ENST00000481474 Q96NJ1 140 aa8.45□□□□□ -1.06
TRIM27-205ENST00000481474 ODF3BA8MYP8 253 aa8.45□□□□□ -1.06
TRIM27-205ENST00000481474 SSBP3-AS1Q7Z2R9 100 aa8.45□□□□□ -1.06
TRIM27-205ENST00000481474 SIPA1L1O43166 1804 aa8.44□□□□□ -1.06
TRIM27-205ENST00000481474 PLXNB3Q9ULL4 1909 aa8.44□□□□□ -1.06
TRIM27-205ENST00000481474 TLN1Q9Y490 2541 aaKnown RBP8.44□□□□□ -1.06
TRIM27-205ENST00000481474 RSPO1Q2MKA7 263 aaPredicted RBP8.44□□□□□ -1.06
TRIM27-205ENST00000481474 LINC01545Q5VT33 79 aa8.44□□□□□ -1.06
TRIM27-205ENST00000481474 ZFYVE26Q68DK2 2539 aa8.44□□□□□ -1.06
TRIM27-205ENST00000481474 LINC00575Q6W349 94 aa8.43□□□□□ -1.06
TRIM27-205ENST00000481474 IGLV4-3A0A075B6K6 122 aa8.43□□□□□ -1.06
TRIM27-205ENST00000481474 K7EQG2 157 aa8.43□□□□□ -1.06
TRIM27-205ENST00000481474 IBA57-AS1B1ANH7 110 aa8.43□□□□□ -1.06
TRIM27-205ENST00000481474 COL24A1Q17RW2 1714 aa8.43□□□□□ -1.06
TRIM27-205ENST00000481474 MRGPRG-AS1Q2M3A8 158 aa8.42□□□□□ -1.06
TRIM27-205ENST00000481474 FN1P02751 2386 aaKnown RBP8.42□□□□□ -1.06
TRIM27-205ENST00000481474 NUP210LQ5VU65 1888 aa8.42□□□□□ -1.06
TRIM27-205ENST00000481474 A0A1W2PNU3 283 aaPredicted RBP8.42□□□□□ -1.06
TRIM27-205ENST00000481474 A0A087WVE0 104 aa8.41□□□□□ -1.06
TRIM27-205ENST00000481474 CENPFP49454 3210 aa8.41□□□□□ -1.06
TRIM27-205ENST00000481474 CEP192Q8TEP8 1941 aa8.41□□□□□ -1.06
TRIM27-205ENST00000481474 TRBV10-3A0A0K0K1G6 114 aa8.41□□□□□ -1.06
TRIM27-205ENST00000481474 ACACBO00763 2458 aa8.41□□□□□ -1.06
TRIM27-205ENST00000481474 TRBV6-4A0A1B0GX49 114 aa8.41□□□□□ -1.06
TRIM27-205ENST00000481474 LRRK2Q5S007 2527 aa8.4□□□□□ -1.06
TRIM27-205ENST00000481474 PIEZO1Q92508 2521 aa8.39□□□□□ -1.07
TRIM27-205ENST00000481474 COL5A3P25940 1745 aaPredicted RBP8.39□□□□□ -1.07
TRIM27-205ENST00000481474 SIPA1L3O60292 1781 aaPredicted RBP8.39□□□□□ -1.07
TRIM27-205ENST00000481474 A0A1B0GU69 56 aa8.39□□□□□ -1.07
TRIM27-205ENST00000481474 COL5A1P20908 1838 aaPredicted RBP8.37□□□□□ -1.07
TRIM27-205ENST00000481474 EML5Q05BV3 1969 aa8.37□□□□□ -1.07
TRIM27-205ENST00000481474 NDUFC1O43677 76 aa8.37□□□□□ -1.07
TRIM27-205ENST00000481474 MAPKAPK5-AS1Q8N8E1 139 aa8.37□□□□□ -1.07
TRIM27-205ENST00000481474 H7C423 109 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms