RNA–Protein interactions for RNA: ENST00000480923.5

VPS36-204, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-204ENST00000480923 CHCHD1Q96BP2 118 aaKnown RBP13□□□□□ -0.33
VPS36-204ENST00000480923 G0S2P27469 103 aa12.99□□□□□ -0.33
VPS36-204ENST00000480923 RNASE13Q5GAN3 156 aaKnown RBP12.99□□□□□ -0.33
VPS36-204ENST00000480923 CSDC2Q9Y534 153 aaKnown RBP12.99□□□□□ -0.33
VPS36-204ENST00000480923 URB1-AS1Q96HZ7 61 aa12.98□□□□□ -0.33
VPS36-204ENST00000480923 SLPIP03973 132 aa12.97□□□□□ -0.33
VPS36-204ENST00000480923 NDUFA6P56556 154 aa12.97□□□□□ -0.33
VPS36-204ENST00000480923 SDIM1Q6ZPB5 146 aa12.97□□□□□ -0.33
VPS36-204ENST00000480923 TIMM21Q9BVV7 248 aa12.97□□□□□ -0.33
VPS36-204ENST00000480923 IGHV3-64A0A075B6Q5 118 aa12.96□□□□□ -0.33
VPS36-204ENST00000480923 SERF1AO75920 110 aa12.96□□□□□ -0.33
VPS36-204ENST00000480923 PLA2G1BP04054 148 aaKnown RBP12.96□□□□□ -0.33
VPS36-204ENST00000480923 RPL39P62891 51 aaKnown RBP12.96□□□□□ -0.33
VPS36-204ENST00000480923 CD164L2Q6UWJ8 174 aa12.96□□□□□ -0.33
VPS36-204ENST00000480923 Q6ZUT4 128 aa12.96□□□□□ -0.33
VPS36-204ENST00000480923 TRAV13-1A0A0B4J241 112 aa12.95□□□□□ -0.34
VPS36-204ENST00000480923 HSBP1O75506 76 aa12.95□□□□□ -0.34
VPS36-204ENST00000480923 COA6Q5JTJ3 125 aaKnown RBP12.95□□□□□ -0.34
VPS36-204ENST00000480923 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.95□□□□□ -0.34
VPS36-204ENST00000480923 GVQW2A0A096LPI5 108 aaPredicted RBP12.94□□□□□ -0.34
VPS36-204ENST00000480923 IGHV1-58A0A0C4DH39 117 aa12.94□□□□□ -0.34
VPS36-204ENST00000480923 S100A6P06703 90 aa12.94□□□□□ -0.34
VPS36-204ENST00000480923 SPANXA1Q9NS26 97 aa12.93□□□□□ -0.34
VPS36-204ENST00000480923 CYSLTR1Q9Y271 337 aa12.93□□□□□ -0.34
VPS36-204ENST00000480923 LINC01549A6NIU2 74 aa12.92□□□□□ -0.34
VPS36-204ENST00000480923 PANO1I0J062 215 aa12.92□□□□□ -0.34
VPS36-204ENST00000480923 LINC00310P59036 64 aa12.92□□□□□ -0.34
VPS36-204ENST00000480923 C2orf66Q6UXQ4 117 aa12.91□□□□□ -0.34
VPS36-204ENST00000480923 COX7A2LO14548 114 aa12.9□□□□□ -0.34
VPS36-204ENST00000480923 NUPR1O60356 82 aa12.9□□□□□ -0.34
VPS36-204ENST00000480923 HBDP02042 147 aa12.9□□□□□ -0.34
VPS36-204ENST00000480923 MALP21145 153 aa12.9□□□□□ -0.34
VPS36-204ENST00000480923 TOMM6Q96B49 74 aa12.9□□□□□ -0.34
VPS36-204ENST00000480923 DPH3Q96FX2 82 aa12.9□□□□□ -0.34
VPS36-204ENST00000480923 PMCHL1Q16048 86 aa12.89□□□□□ -0.35
VPS36-204ENST00000480923 LINC00526Q96FQ7 95 aa12.89□□□□□ -0.35
VPS36-204ENST00000480923 OPRPNQ99935 248 aaPredicted RBP12.89□□□□□ -0.35
VPS36-204ENST00000480923 VPS13BQ7Z7G8 4022 aa12.89□□□□□ -0.35
VPS36-204ENST00000480923 ZNF561-AS1K7EIQ3 104 aa12.88□□□□□ -0.35
VPS36-204ENST00000480923 MRPS36P82909 103 aaKnown RBP12.88□□□□□ -0.35
VPS36-204ENST00000480923 FAM19A2Q8N3H0 131 aa12.88□□□□□ -0.35
VPS36-204ENST00000480923 TMA7Q9Y2S6 64 aaKnown RBP12.88□□□□□ -0.35
VPS36-204ENST00000480923 A0A096LNJ9 63 aa12.87□□□□□ -0.35
VPS36-204ENST00000480923 CHTF8P0CG12 524 aa12.87□□□□□ -0.35
VPS36-204ENST00000480923 COX6A2Q02221 97 aa12.87□□□□□ -0.35
VPS36-204ENST00000480923 CIRBPQ14011 172 aaKnown RBP12.87□□□□□ -0.35
VPS36-204ENST00000480923 C5orf38Q86SI9 138 aa12.87□□□□□ -0.35
VPS36-204ENST00000480923 FAM104AQ969W3 186 aa12.87□□□□□ -0.35
VPS36-204ENST00000480923 PYGO1Q9Y3Y4 419 aa12.87□□□□□ -0.35
VPS36-204ENST00000480923 IFITM10A6NMD0 228 aa12.86□□□□□ -0.35
VPS36-204ENST00000480923 SCGB3A1Q96QR1 104 aa12.86□□□□□ -0.35
VPS36-204ENST00000480923 CARD19Q96LW7 228 aa12.85□□□□□ -0.35
VPS36-204ENST00000480923 SRRM2Q9UQ35 2752 aaKnown RBP12.85□□□□□ -0.35
VPS36-204ENST00000480923 PDZD11Q5EBL8 140 aa12.84□□□□□ -0.35
VPS36-204ENST00000480923 ERASQ7Z444 233 aa12.84□□□□□ -0.35
VPS36-204ENST00000480923 SPACA4Q8TDM5 124 aa12.84□□□□□ -0.35
VPS36-204ENST00000480923 TMEM141Q96I45 108 aa12.84□□□□□ -0.35
VPS36-204ENST00000480923 TIMM17AQ99595 171 aa12.84□□□□□ -0.35
VPS36-204ENST00000480923 IGKV2-24A0A0C4DH68 120 aa12.83□□□□□ -0.36
VPS36-204ENST00000480923 IGIPA6NJ69 53 aa12.83□□□□□ -0.36
VPS36-204ENST00000480923 ATP5LO75964 103 aa12.83□□□□□ -0.36
VPS36-204ENST00000480923 LEPROTL1O95214 131 aa12.83□□□□□ -0.36
VPS36-204ENST00000480923 APOMO95445 188 aa12.83□□□□□ -0.36
VPS36-204ENST00000480923 NPSP0C0P6 89 aa12.83□□□□□ -0.36
VPS36-204ENST00000480923 SNRPEP62304 92 aaKnown RBP12.83□□□□□ -0.36
VPS36-204ENST00000480923 SYCNQ0VAF6 134 aa12.83□□□□□ -0.36
VPS36-204ENST00000480923 IGLV4-69A0A075B6H9 119 aa12.82□□□□□ -0.36
VPS36-204ENST00000480923 IGLV4-3A0A075B6K6 122 aa12.82□□□□□ -0.36
VPS36-204ENST00000480923 A0A087WYN8 130 aa12.82□□□□□ -0.36
VPS36-204ENST00000480923 S100A2P29034 98 aa12.82□□□□□ -0.36
VPS36-204ENST00000480923 RPL37AP61513 92 aaKnown RBP12.82□□□□□ -0.36
VPS36-204ENST00000480923 PAPPA-AS1Q5QFB9 102 aa12.82□□□□□ -0.36
VPS36-204ENST00000480923 HSPB8Q9UJY1 196 aa12.82□□□□□ -0.36
VPS36-204ENST00000480923 C5orf52A6NGY3 159 aa12.81□□□□□ -0.36
VPS36-204ENST00000480923 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.81□□□□□ -0.36
VPS36-204ENST00000480923 MAJINQ3KP22 176 aa12.81□□□□□ -0.36
VPS36-204ENST00000480923 Q6ZN92 141 aa12.81□□□□□ -0.36
VPS36-204ENST00000480923 HIST3H2BBQ8N257 126 aa12.81□□□□□ -0.36
VPS36-204ENST00000480923 PACRGQ96M98 296 aaPredicted RBP12.81□□□□□ -0.36
VPS36-204ENST00000480923 PKIGQ9Y2B9 76 aa12.81□□□□□ -0.36
VPS36-204ENST00000480923 FABP4P15090 132 aa12.8□□□□□ -0.36
VPS36-204ENST00000480923 KRTAP10-4P60372 401 aaPredicted RBP12.8□□□□□ -0.36
VPS36-204ENST00000480923 CAMK2N2Q96S95 79 aa12.8□□□□□ -0.36
VPS36-204ENST00000480923 A0A096LNI7 61 aa12.79□□□□□ -0.36
VPS36-204ENST00000480923 IGHV3OR16-9A0A0B4J2B5 98 aa12.79□□□□□ -0.36
VPS36-204ENST00000480923 SPAG11BQ08648 103 aa12.79□□□□□ -0.36
VPS36-204ENST00000480923 TEX43Q6ZNM6 134 aa12.79□□□□□ -0.36
VPS36-204ENST00000480923 VCX2Q9H322 139 aa12.79□□□□□ -0.36
VPS36-204ENST00000480923 Q6ZRU5 148 aa12.78□□□□□ -0.36
VPS36-204ENST00000480923 IFI27L1Q96BM0 104 aa12.78□□□□□ -0.36
VPS36-204ENST00000480923 OR10D4PQ8NGN7 298 aa12.77□□□□□ -0.37
VPS36-204ENST00000480923 ORAOV1Q8WV07 137 aa12.77□□□□□ -0.37
VPS36-204ENST00000480923 C2orf48Q96LS8 159 aa12.77□□□□□ -0.37
VPS36-204ENST00000480923 C2orf88Q9BSF0 95 aa12.77□□□□□ -0.37
VPS36-204ENST00000480923 PLAC8Q9NZF1 115 aa12.77□□□□□ -0.37
VPS36-204ENST00000480923 STPG4Q8N801 248 aa12.76□□□□□ -0.37
VPS36-204ENST00000480923 LINC00474Q9P2X8 69 aa12.76□□□□□ -0.37
VPS36-204ENST00000480923 MYCBP2O75592 4640 aa12.75□□□□□ -0.37
VPS36-204ENST00000480923 FLG2Q5D862 2391 aaPredicted RBP12.75□□□□□ -0.37
VPS36-204ENST00000480923 LINC00242Q5T6M2 205 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms