RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 SLPIP03973 132 aa7.52□□□□□ -1.2
SIK3-210ENST00000480468 NTM-AS1Q6ZSK4 140 aa7.52□□□□□ -1.2
SIK3-210ENST00000480468 PTPRQQ9UMZ3 2332 aa7.52□□□□□ -1.21
SIK3-210ENST00000480468 K7EQD1 137 aa7.52□□□□□ -1.21
SIK3-210ENST00000480468 LAMA5O15230 3695 aa7.52□□□□□ -1.21
SIK3-210ENST00000480468 ATMQ13315 3056 aa7.52□□□□□ -1.21
SIK3-210ENST00000480468 TLN1Q9Y490 2541 aaKnown RBP7.51□□□□□ -1.21
SIK3-210ENST00000480468 A0A1W2PPR1 153 aa7.51□□□□□ -1.21
SIK3-210ENST00000480468 J3QLI3 93 aa7.51□□□□□ -1.21
SIK3-210ENST00000480468 PRM2P04554 102 aa7.51□□□□□ -1.21
SIK3-210ENST00000480468 ADORA2A-AS1P86434 159 aa7.51□□□□□ -1.21
SIK3-210ENST00000480468 C16orf95Q9H693 158 aa7.51□□□□□ -1.21
SIK3-210ENST00000480468 F8WDY8 70 aa7.51□□□□□ -1.21
SIK3-210ENST00000480468 DEFB131AP59861 70 aa7.51□□□□□ -1.21
SIK3-210ENST00000480468 WFDC9Q8NEX5 89 aa7.51□□□□□ -1.21
SIK3-210ENST00000480468 SORL1Q92673 2214 aa7.51□□□□□ -1.21
SIK3-210ENST00000480468 IGHV4-38-2P0DP08 117 aa7.5□□□□□ -1.21
SIK3-210ENST00000480468 PTPRZ1P23471 2315 aaPredicted RBP7.5□□□□□ -1.21
SIK3-210ENST00000480468 PAX4O43316 350 aa7.5□□□□□ -1.21
SIK3-210ENST00000480468 Q8N814 137 aa7.5□□□□□ -1.21
SIK3-210ENST00000480468 ABCA2Q9BZC7 2435 aa7.49□□□□□ -1.21
SIK3-210ENST00000480468 AKAP13Q12802 2813 aa7.49□□□□□ -1.21
SIK3-210ENST00000480468 INSP01308 110 aa7.49□□□□□ -1.21
SIK3-210ENST00000480468 ATP5EP56381 51 aaPredicted RBP7.49□□□□□ -1.21
SIK3-210ENST00000480468 SPTAN1Q13813 2472 aaKnown RBP7.49□□□□□ -1.21
SIK3-210ENST00000480468 ASH1LQ9NR48 2969 aaKnown RBP7.49□□□□□ -1.21
SIK3-210ENST00000480468 A0A1W2PRX2 142 aa7.48□□□□□ -1.21
SIK3-210ENST00000480468 UBE2L6O14933 153 aa7.48□□□□□ -1.21
SIK3-210ENST00000480468 NDUFC1O43677 76 aa7.48□□□□□ -1.21
SIK3-210ENST00000480468 LINC00482Q8N8I6 264 aa7.48□□□□□ -1.21
SIK3-210ENST00000480468 IL17DQ8TAD2 202 aa7.48□□□□□ -1.21
SIK3-210ENST00000480468 FP248Q71RG6 208 aaPredicted RBP7.48□□□□□ -1.21
SIK3-210ENST00000480468 TOMM7Q9P0U1 55 aa7.48□□□□□ -1.21
SIK3-210ENST00000480468 IGHV3OR16-9A0A0B4J2B5 98 aa7.47□□□□□ -1.21
SIK3-210ENST00000480468 C1orf43Q9BWL3 253 aa7.47□□□□□ -1.21
SIK3-210ENST00000480468 SVEP1Q4LDE5 3571 aa7.47□□□□□ -1.21
SIK3-210ENST00000480468 A0A087WZ39 114 aa7.47□□□□□ -1.21
SIK3-210ENST00000480468 TMEM86BQ8N661 226 aa7.47□□□□□ -1.21
SIK3-210ENST00000480468 LOC110117498A0A087WWA1 95 aa7.46□□□□□ -1.22
SIK3-210ENST00000480468 Q6ZQT0 140 aa7.45□□□□□ -1.22
SIK3-210ENST00000480468 A0A096LNT2 108 aa7.44□□□□□ -1.22
SIK3-210ENST00000480468 NANOS2P60321 138 aaKnown RBP7.44□□□□□ -1.22
SIK3-210ENST00000480468 C10orf99Q6UWK7 81 aa7.44□□□□□ -1.22
SIK3-210ENST00000480468 DEFB123Q8N688 67 aa7.44□□□□□ -1.22
SIK3-210ENST00000480468 C11orf44Q8N8P7 122 aa7.44□□□□□ -1.22
SIK3-210ENST00000480468 CREBBPQ92793 2442 aa7.44□□□□□ -1.22
SIK3-210ENST00000480468 TRGV1A0A0A0MS02 117 aa7.44□□□□□ -1.22
SIK3-210ENST00000480468 RPL35AP18077 110 aaKnown RBP7.44□□□□□ -1.22
SIK3-210ENST00000480468 NBL1P41271 181 aa7.44□□□□□ -1.22
SIK3-210ENST00000480468 LINC01547P58512 204 aaPredicted RBP7.44□□□□□ -1.22
SIK3-210ENST00000480468 CXCL6P80162 114 aa7.44□□□□□ -1.22
SIK3-210ENST00000480468 UBE2E2Q96LR5 201 aa7.44□□□□□ -1.22
SIK3-210ENST00000480468 MAP6D1Q9H9H5 199 aa7.43□□□□□ -1.22
SIK3-210ENST00000480468 RELNP78509 3460 aa7.43□□□□□ -1.22
SIK3-210ENST00000480468 F8WEM9 126 aa7.43□□□□□ -1.22
SIK3-210ENST00000480468 SPTA1P02549 2419 aa7.42□□□□□ -1.22
SIK3-210ENST00000480468 IGHV4-61A0A0C4DH41 118 aa7.42□□□□□ -1.22
SIK3-210ENST00000480468 RBM3P98179 157 aaKnown RBP7.42□□□□□ -1.22
SIK3-210ENST00000480468 RMI2Q96E14 147 aa7.42□□□□□ -1.22
SIK3-210ENST00000480468 TRBV7-6A0A0J9YX20 115 aa7.42□□□□□ -1.22
SIK3-210ENST00000480468 ZNF561-AS1K7EIQ3 104 aa7.42□□□□□ -1.22
SIK3-210ENST00000480468 PDE6GP18545 87 aa7.42□□□□□ -1.22
SIK3-210ENST00000480468 C6orf223Q8N319 242 aa7.42□□□□□ -1.22
SIK3-210ENST00000480468 TRAV10A0A0B4J240 114 aa7.41□□□□□ -1.22
SIK3-210ENST00000480468 AVPP01185 164 aa7.41□□□□□ -1.22
SIK3-210ENST00000480468 Q6ZTI0 123 aa7.41□□□□□ -1.22
SIK3-210ENST00000480468 SNURFQ9Y675 71 aa7.41□□□□□ -1.22
SIK3-210ENST00000480468 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.41□□□□□ -1.224e-6■■□□□ 13.3
SIK3-210ENST00000480468 Q6ZVQ6 151 aa7.4□□□□□ -1.22
SIK3-210ENST00000480468 ZNF292O60281 2723 aa7.4□□□□□ -1.22
SIK3-210ENST00000480468 TRBV7-4A0A0J9YYF1 115 aa7.4□□□□□ -1.23
SIK3-210ENST00000480468 H3BQ85 93 aa7.4□□□□□ -1.23
SIK3-210ENST00000480468 ERC2-IT1O76042 136 aa7.4□□□□□ -1.23
SIK3-210ENST00000480468 C6orf226Q5I0X4 101 aa7.4□□□□□ -1.23
SIK3-210ENST00000480468 C9orf66Q5T8R8 295 aa7.4□□□□□ -1.23
SIK3-210ENST00000480468 C1orf158Q8N1D5 194 aa7.4□□□□□ -1.23
SIK3-210ENST00000480468 Q8IZM0 81 aa7.39□□□□□ -1.23
SIK3-210ENST00000480468 PKIGQ9Y2B9 76 aa7.39□□□□□ -1.23
SIK3-210ENST00000480468 AKAP6Q13023 2319 aa7.39□□□□□ -1.23
SIK3-210ENST00000480468 ZFHX3Q15911 3703 aa7.39□□□□□ -1.23
SIK3-210ENST00000480468 IGLV4-60A0A075B6I1 120 aa7.39□□□□□ -1.23
SIK3-210ENST00000480468 LINC00575Q6W349 94 aa7.39□□□□□ -1.23
SIK3-210ENST00000480468 WFDC11Q8NEX6 87 aa7.39□□□□□ -1.23
SIK3-210ENST00000480468 MSMBP08118 114 aa7.38□□□□□ -1.23
SIK3-210ENST00000480468 MIFP14174 115 aa7.38□□□□□ -1.23
SIK3-210ENST00000480468 IGHV4-59P01825 116 aa7.37□□□□□ -1.23
SIK3-210ENST00000480468 HAMPP81172 84 aa7.37□□□□□ -1.23
SIK3-210ENST00000480468 COX17Q14061 63 aa7.37□□□□□ -1.23
SIK3-210ENST00000480468 IGKV3OR2-268A0A0C4DH90 116 aa7.37□□□□□ -1.23
SIK3-210ENST00000480468 SLURP1P55000 103 aa7.37□□□□□ -1.23
SIK3-210ENST00000480468 LINC00474Q9P2X8 69 aa7.37□□□□□ -1.23
SIK3-210ENST00000480468 TRBV6-8A0A0A6YYG3 113 aa7.36□□□□□ -1.23
SIK3-210ENST00000480468 LINC00959A0A1B0GUT2 108 aa7.36□□□□□ -1.23
SIK3-210ENST00000480468 Q8N3U1 123 aa7.36□□□□□ -1.23
SIK3-210ENST00000480468 C6orf99Q4VX62 202 aa7.36□□□□□ -1.23
SIK3-210ENST00000480468 C1orf195Q5TG92 126 aa7.36□□□□□ -1.23
SIK3-210ENST00000480468 NBASA2RRP1 2371 aa7.36□□□□□ -1.23
SIK3-210ENST00000480468 V9GYY9 64 aa7.35□□□□□ -1.23
SIK3-210ENST00000480468 DEFB114Q30KQ6 69 aa7.35□□□□□ -1.23
SIK3-210ENST00000480468 DEFB112Q30KQ8 113 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms