RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 C9orf163Q8N9P6 203 aa3.19□□□□□ -1.9
PTCD3-213ENST00000480102 TMEM101Q96IK0 257 aa3.19□□□□□ -1.9
PTCD3-213ENST00000480102 GNB1LQ9BYB4 327 aa3.19□□□□□ -1.9
PTCD3-213ENST00000480102 Q9HAA7 133 aa3.19□□□□□ -1.9
PTCD3-213ENST00000480102 CDC42SE2Q9NRR3 84 aa3.19□□□□□ -1.9
PTCD3-213ENST00000480102 GAGE2DQ9UEU5 116 aa3.19□□□□□ -1.9
PTCD3-213ENST00000480102 PCLOQ9Y6V0 5065 aa3.18□□□□□ -1.9
PTCD3-213ENST00000480102 IGLV4-60A0A075B6I1 120 aa3.18□□□□□ -1.9
PTCD3-213ENST00000480102 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.18□□□□□ -1.9
PTCD3-213ENST00000480102 LINC01546A6NGU7 62 aa3.18□□□□□ -1.9
PTCD3-213ENST00000480102 HLA-DQA1P01909 254 aa3.18□□□□□ -1.9
PTCD3-213ENST00000480102 ADCYAP1P18509 176 aa3.18□□□□□ -1.9
PTCD3-213ENST00000480102 PMCHP20382 165 aa3.18□□□□□ -1.9
PTCD3-213ENST00000480102 RPS10P46783 165 aaKnown RBP3.18□□□□□ -1.9
PTCD3-213ENST00000480102 XGP55808 180 aa3.18□□□□□ -1.9
PTCD3-213ENST00000480102 GAGE6Q13070 117 aa3.18□□□□□ -1.9
PTCD3-213ENST00000480102 CD164L2Q6UWJ8 174 aa3.18□□□□□ -1.9
PTCD3-213ENST00000480102 TMEM136Q6ZRR5 245 aa3.18□□□□□ -1.9
PTCD3-213ENST00000480102 ERASQ7Z444 233 aa3.18□□□□□ -1.9
PTCD3-213ENST00000480102 LINC01561Q8N1V8 128 aa3.18□□□□□ -1.9
PTCD3-213ENST00000480102 ZNF664Q8N3J9 261 aa3.18□□□□□ -1.9
PTCD3-213ENST00000480102 RPL39LQ96EH5 51 aaKnown RBP3.18□□□□□ -1.9
PTCD3-213ENST00000480102 SMIM2Q9BVW6 85 aa3.18□□□□□ -1.9
PTCD3-213ENST00000480102 NXT2Q9NPJ8 142 aaKnown RBP3.18□□□□□ -1.9
PTCD3-213ENST00000480102 UBE2D4Q9Y2X8 147 aa3.18□□□□□ -1.9
PTCD3-213ENST00000480102 IGLV10-54A0A075B6I4 117 aa3.17□□□□□ -1.9
PTCD3-213ENST00000480102 A0A0U1RRA0 63 aa3.17□□□□□ -1.9
PTCD3-213ENST00000480102 hDV102S1A0JD36 115 aa3.17□□□□□ -1.9
PTCD3-213ENST00000480102 EPM2AB3EWF7 344 aa3.17□□□□□ -1.9
PTCD3-213ENST00000480102 D6R8Y8 96 aa3.17□□□□□ -1.9
PTCD3-213ENST00000480102 S100PP25815 95 aa3.17□□□□□ -1.9
PTCD3-213ENST00000480102 FCER1GP30273 86 aa3.17□□□□□ -1.9
PTCD3-213ENST00000480102 KRTAP10-1P60331 282 aa3.17□□□□□ -1.9
PTCD3-213ENST00000480102 ORMDL2Q53FV1 153 aa3.17□□□□□ -1.9
PTCD3-213ENST00000480102 PAPPA-AS1Q5QFB9 102 aa3.17□□□□□ -1.9
PTCD3-213ENST00000480102 AMMECR1LQ6DCA0 310 aa3.17□□□□□ -1.9
PTCD3-213ENST00000480102 FAM19A3Q7Z5A8 133 aa3.17□□□□□ -1.9
PTCD3-213ENST00000480102 CHCHD10Q8WYQ3 142 aaPredicted RBP3.17□□□□□ -1.9
PTCD3-213ENST00000480102 CHAC1Q9BUX1 264 aa3.17□□□□□ -1.9
PTCD3-213ENST00000480102 KRTAP2-2Q9BYT5 123 aa3.17□□□□□ -1.9
PTCD3-213ENST00000480102 LINC00474Q9P2X8 69 aa3.17□□□□□ -1.9
PTCD3-213ENST00000480102 LINC00959A0A1B0GUT2 108 aa3.16□□□□□ -1.9
PTCD3-213ENST00000480102 PRSS1P07477 247 aa3.16□□□□□ -1.9
PTCD3-213ENST00000480102 RAB5AP20339 215 aa3.16□□□□□ -1.9
PTCD3-213ENST00000480102 SSTP61278 116 aa3.16□□□□□ -1.9
PTCD3-213ENST00000480102 WFDC2Q14508 124 aa3.16□□□□□ -1.9
PTCD3-213ENST00000480102 SS18Q15532 418 aa3.16□□□□□ -1.9
PTCD3-213ENST00000480102 SDIM1Q6ZPB5 146 aa3.16□□□□□ -1.9
PTCD3-213ENST00000480102 SVBPQ8N300 66 aa3.16□□□□□ -1.9
PTCD3-213ENST00000480102 Q8N8P6 123 aa3.16□□□□□ -1.9
PTCD3-213ENST00000480102 OR10D4PQ8NGN7 298 aa3.16□□□□□ -1.9
PTCD3-213ENST00000480102 BAALCQ8WXS3 180 aa3.16□□□□□ -1.9
PTCD3-213ENST00000480102 C2orf48Q96LS8 159 aa3.16□□□□□ -1.9
PTCD3-213ENST00000480102 PRELID3AQ96N28 172 aa3.16□□□□□ -1.9
PTCD3-213ENST00000480102 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.15□□□□□ -1.91
PTCD3-213ENST00000480102 IGHV3OR16-9A0A0B4J2B5 98 aa3.15□□□□□ -1.91
PTCD3-213ENST00000480102 IGHV1-58A0A0C4DH39 117 aa3.15□□□□□ -1.91
PTCD3-213ENST00000480102 IGKV2-29A2NJV5 120 aaPredicted RBP3.15□□□□□ -1.91
PTCD3-213ENST00000480102 GAS8-AS1O95177 125 aa3.15□□□□□ -1.91
PTCD3-213ENST00000480102 SNAPINO95295 136 aa3.15□□□□□ -1.91
PTCD3-213ENST00000480102 NPYP01303 97 aa3.15□□□□□ -1.91
PTCD3-213ENST00000480102 SEC11AP67812 179 aa3.15□□□□□ -1.91
PTCD3-213ENST00000480102 NDUFA5Q16718 116 aa3.15□□□□□ -1.91
PTCD3-213ENST00000480102 MRPL54Q6P161 138 aaKnown RBP3.15□□□□□ -1.91
PTCD3-213ENST00000480102 Q75L30 129 aa3.15□□□□□ -1.91
PTCD3-213ENST00000480102 COMMD7Q86VX2 200 aa3.15□□□□□ -1.91
PTCD3-213ENST00000480102 FAM104AQ969W3 186 aa3.15□□□□□ -1.91
PTCD3-213ENST00000480102 TIMM17AQ99595 171 aa3.15□□□□□ -1.91
PTCD3-213ENST00000480102 VCX2Q9H322 139 aa3.15□□□□□ -1.91
PTCD3-213ENST00000480102 MAP1LC3AQ9H492 121 aa3.15□□□□□ -1.91
PTCD3-213ENST00000480102 IGLV5-37A0A075B6J1 123 aa3.14□□□□□ -1.91
PTCD3-213ENST00000480102 A0A087WZ39 114 aa3.14□□□□□ -1.91
PTCD3-213ENST00000480102 IGIPA6NJ69 53 aa3.14□□□□□ -1.91
PTCD3-213ENST00000480102 COX7A2LO14548 114 aa3.14□□□□□ -1.91
PTCD3-213ENST00000480102 APOMO95445 188 aa3.14□□□□□ -1.91
PTCD3-213ENST00000480102 PRSS2P07478 247 aa3.14□□□□□ -1.91
PTCD3-213ENST00000480102 TLX1NBP0CAT3 122 aa3.14□□□□□ -1.91
PTCD3-213ENST00000480102 IFI27P40305 119 aaPredicted RBP3.14□□□□□ -1.91
PTCD3-213ENST00000480102 RNASEKQ6P5S7 137 aaKnown RBP3.14□□□□□ -1.91
PTCD3-213ENST00000480102 C15orf56Q8N910 161 aa3.14□□□□□ -1.91
PTCD3-213ENST00000480102 TMEM141Q96I45 108 aa3.14□□□□□ -1.91
PTCD3-213ENST00000480102 AMELXQ99217 191 aa3.14□□□□□ -1.91
PTCD3-213ENST00000480102 CYSLTR1Q9Y271 337 aa3.14□□□□□ -1.91
PTCD3-213ENST00000480102 ABCA13Q86UQ4 5058 aa3.13□□□□□ -1.91
PTCD3-213ENST00000480102 IGHV3-64A0A075B6Q5 118 aa3.13□□□□□ -1.91
PTCD3-213ENST00000480102 SMKR1H3BMG3 65 aa3.13□□□□□ -1.91
PTCD3-213ENST00000480102 SCXQ7RTU7 201 aa3.13□□□□□ -1.91
PTCD3-213ENST00000480102 TOMM6Q96B49 74 aa3.13□□□□□ -1.91
PTCD3-213ENST00000480102 PLAC8Q9NZF1 115 aa3.13□□□□□ -1.91
PTCD3-213ENST00000480102 MYCBP2O75592 4640 aa3.13□□□□□ -1.91
PTCD3-213ENST00000480102 VPS13BQ7Z7G8 4022 aa3.12□□□□□ -1.91
PTCD3-213ENST00000480102 IGLV4-3A0A075B6K6 122 aa3.12□□□□□ -1.91
PTCD3-213ENST00000480102 IGLV5-45A0A087WSX0 123 aa3.12□□□□□ -1.91
PTCD3-213ENST00000480102 HERV-K104P63124 156 aa3.12□□□□□ -1.91
PTCD3-213ENST00000480102 C2orf66Q6UXQ4 117 aa3.12□□□□□ -1.91
PTCD3-213ENST00000480102 Q6ZN92 141 aa3.12□□□□□ -1.91
PTCD3-213ENST00000480102 CIRBP-AS1Q8TBR5 109 aa3.12□□□□□ -1.91
PTCD3-213ENST00000480102 SPACA4Q8TDM5 124 aa3.12□□□□□ -1.91
PTCD3-213ENST00000480102 YPEL4Q96NS1 127 aa3.12□□□□□ -1.91
PTCD3-213ENST00000480102 C2orf88Q9BSF0 95 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms