RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.92□□□□□ -1.144e-9■□□□□ 11.2
CHD6-208ENST00000480022 NDUFC2O95298 119 aa7.92□□□□□ -1.14
CHD6-208ENST00000480022 FHL2Q14192 279 aa7.92□□□□□ -1.14
CHD6-208ENST00000480022 Q8N2B8 174 aa7.92□□□□□ -1.14
CHD6-208ENST00000480022 Q8N6K4 173 aa7.92□□□□□ -1.14
CHD6-208ENST00000480022 F6UB75 175 aa7.91□□□□□ -1.14
CHD6-208ENST00000480022 SAA4P35542 130 aa7.91□□□□□ -1.14
CHD6-208ENST00000480022 CSPG4Q6UVK1 2322 aa7.91□□□□□ -1.14
CHD6-208ENST00000480022 FAM218AQ96MZ4 157 aa7.91□□□□□ -1.14
CHD6-208ENST00000480022 NDUFA1O15239 70 aa7.9□□□□□ -1.14
CHD6-208ENST00000480022 KLK9Q2XQG4 91 aa7.9□□□□□ -1.14
CHD6-208ENST00000480022 FAM104AQ969W3 186 aa7.9□□□□□ -1.14
CHD6-208ENST00000480022 KLK9Q9UKQ9 250 aa7.9□□□□□ -1.14
CHD6-208ENST00000480022 INAFM1C9JVW0 142 aa7.9□□□□□ -1.15
CHD6-208ENST00000480022 SOCS3O14543 225 aa7.9□□□□□ -1.15
CHD6-208ENST00000480022 MINOS1Q5TGZ0 78 aa7.9□□□□□ -1.15
CHD6-208ENST00000480022 COPS9Q8WXC6 57 aa7.9□□□□□ -1.15
CHD6-208ENST00000480022 MINOS1-NBL1R4GNA1 71 aa7.9□□□□□ -1.15
CHD6-208ENST00000480022 RNASE13Q5GAN3 156 aaKnown RBP7.89□□□□□ -1.15
CHD6-208ENST00000480022 MAST4O15021 2626 aa7.89□□□□□ -1.15
CHD6-208ENST00000480022 Q8N9W7 124 aa7.89□□□□□ -1.15
CHD6-208ENST00000480022 Q9HAA7 133 aa7.89□□□□□ -1.15
CHD6-208ENST00000480022 LINC00846Q9NV44 126 aa7.89□□□□□ -1.15
CHD6-208ENST00000480022 FAM223BA6NKX1 122 aa7.88□□□□□ -1.15
CHD6-208ENST00000480022 ZFHX3Q15911 3703 aa7.88□□□□□ -1.15
CHD6-208ENST00000480022 KLLNB2CW77 178 aa7.88□□□□□ -1.15
CHD6-208ENST00000480022 ATP6V0E1O15342 81 aa7.88□□□□□ -1.15
CHD6-208ENST00000480022 CD164Q04900 197 aa7.88□□□□□ -1.15
CHD6-208ENST00000480022 TMEM243Q9BU79 118 aa7.88□□□□□ -1.15
CHD6-208ENST00000480022 C14orf132Q9NPU4 83 aa7.88□□□□□ -1.15
CHD6-208ENST00000480022 DEFB112Q30KQ8 113 aa7.87□□□□□ -1.15
CHD6-208ENST00000480022 C9orf85Q96MD7 179 aa7.87□□□□□ -1.15
CHD6-208ENST00000480022 UBE2D4Q9Y2X8 147 aa7.87□□□□□ -1.15
CHD6-208ENST00000480022 PSMB8P28062 276 aa7.87□□□□□ -1.15
CHD6-208ENST00000480022 TRAV12-2A0A075B6T6 113 aa7.86□□□□□ -1.15
CHD6-208ENST00000480022 G3V318 75 aa7.86□□□□□ -1.15
CHD6-208ENST00000480022 FAM223AQ8IWN6 122 aa7.86□□□□□ -1.15
CHD6-208ENST00000480022 SERP1Q9Y6X1 66 aa7.86□□□□□ -1.15
CHD6-208ENST00000480022 TLN2Q9Y4G6 2542 aa7.86□□□□□ -1.15
CHD6-208ENST00000480022 IGHV3-16A0A0C4DH30 117 aa7.86□□□□□ -1.15
CHD6-208ENST00000480022 EPM2AB3EWF7 344 aa7.86□□□□□ -1.15
CHD6-208ENST00000480022 SOSTDC1Q6X4U4 206 aa7.86□□□□□ -1.15
CHD6-208ENST00000480022 F8P00451 2351 aa7.86□□□□□ -1.15
CHD6-208ENST00000480022 GHRHP01286 108 aa7.85□□□□□ -1.15
CHD6-208ENST00000480022 Q9H8V8 135 aa7.85□□□□□ -1.15
CHD6-208ENST00000480022 CDKN2A-AS1Q9UH64 79 aa7.85□□□□□ -1.15
CHD6-208ENST00000480022 HOXD3P31249 432 aaPredicted RBP7.85□□□□□ -1.15
CHD6-208ENST00000480022 HIST2H2BDQ6DRA6 164 aa7.85□□□□□ -1.15
CHD6-208ENST00000480022 OVOL2Q9BRP0 275 aa7.85□□□□□ -1.15
CHD6-208ENST00000480022 CUBNO60494 3623 aa7.85□□□□□ -1.15
CHD6-208ENST00000480022 RBMY1BA6NDE4 496 aaKnown RBP7.84□□□□□ -1.15
CHD6-208ENST00000480022 RBMY1EA6NEQ0 496 aaKnown RBP7.84□□□□□ -1.15
CHD6-208ENST00000480022 IGHG2P01859 326 aa7.84□□□□□ -1.15
CHD6-208ENST00000480022 RBMY1DP0C7P1 496 aaKnown RBP7.84□□□□□ -1.15
CHD6-208ENST00000480022 RBMY1A1P0DJD3 496 aaKnown RBP7.84□□□□□ -1.15
CHD6-208ENST00000480022 RBMY1CP0DJD4 496 aa7.84□□□□□ -1.15
CHD6-208ENST00000480022 RBMY1FQ15415 496 aaKnown RBP7.84□□□□□ -1.15
CHD6-208ENST00000480022 C11orf44Q8N8P7 122 aa7.84□□□□□ -1.15
CHD6-208ENST00000480022 ZNF625Q96I27 306 aaPredicted RBP7.84□□□□□ -1.15
CHD6-208ENST00000480022 HIVEP2P31629 2446 aa7.84□□□□□ -1.15
CHD6-208ENST00000480022 TRBV12-3P01733 135 aa7.84□□□□□ -1.15
CHD6-208ENST00000480022 C9orf129Q5T035 196 aaKnown RBP7.84□□□□□ -1.15
CHD6-208ENST00000480022 Q6YL49 198 aa7.84□□□□□ -1.15
CHD6-208ENST00000480022 MXRA5Q9NR99 2828 aa7.84□□□□□ -1.15
CHD6-208ENST00000480022 IGKV3-7A0A075B6H7 116 aa7.84□□□□□ -1.16
CHD6-208ENST00000480022 OBSCN-AS1Q96MR7 158 aa7.84□□□□□ -1.16
CHD6-208ENST00000480022 IGHV4-59P01825 116 aa7.83□□□□□ -1.16
CHD6-208ENST00000480022 RPL28P46779 137 aaKnown RBP7.83□□□□□ -1.16
CHD6-208ENST00000480022 UNQ9165/PRO28630Q6UXU0 137 aa7.83□□□□□ -1.16
CHD6-208ENST00000480022 C20orf197Q8N268 126 aa7.83□□□□□ -1.16
CHD6-208ENST00000480022 SONP18583 2426 aaKnown RBP7.83□□□□□ -1.16
CHD6-208ENST00000480022 H3BUX3 64 aa7.82□□□□□ -1.16
CHD6-208ENST00000480022 IGLV5-45A0A087WSX0 123 aa7.82□□□□□ -1.16
CHD6-208ENST00000480022 XCL1P47992 114 aa7.82□□□□□ -1.16
CHD6-208ENST00000480022 HILS1P60008 231 aa7.82□□□□□ -1.16
CHD6-208ENST00000480022 XCL2Q9UBD3 114 aa7.82□□□□□ -1.16
CHD6-208ENST00000480022 TRAV23DV6A0A075B6W5 121 aa7.81□□□□□ -1.16
CHD6-208ENST00000480022 TRAV13-2A0A0B4J235 113 aa7.81□□□□□ -1.16
CHD6-208ENST00000480022 NDUFA4O00483 81 aa7.81□□□□□ -1.16
CHD6-208ENST00000480022 LY6EQ16553 131 aa7.81□□□□□ -1.16
CHD6-208ENST00000480022 NSD1Q96L73 2696 aaPredicted RBP7.81□□□□□ -1.16
CHD6-208ENST00000480022 FN1P02751 2386 aaKnown RBP7.81□□□□□ -1.16
CHD6-208ENST00000480022 IGLV5-39A0A0G2JS06 123 aa7.8□□□□□ -1.16
CHD6-208ENST00000480022 A6NDX4 124 aa7.8□□□□□ -1.16
CHD6-208ENST00000480022 S100A7L2Q5SY68 101 aa7.8□□□□□ -1.16
CHD6-208ENST00000480022 ESM1Q9NQ30 184 aa7.8□□□□□ -1.16
CHD6-208ENST00000480022 CRPP02741 224 aa7.8□□□□□ -1.16
CHD6-208ENST00000480022 ATP5EP2Q5VTU8 51 aa7.8□□□□□ -1.16
CHD6-208ENST00000480022 CHCHD7Q9BUK0 85 aa7.8□□□□□ -1.16
CHD6-208ENST00000480022 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.79□□□□□ -1.16
CHD6-208ENST00000480022 A0A087WYN8 130 aa7.79□□□□□ -1.16
CHD6-208ENST00000480022 IGKV2-29A2NJV5 120 aaPredicted RBP7.79□□□□□ -1.16
CHD6-208ENST00000480022 DNAJC9-AS1A6NH13 148 aa7.79□□□□□ -1.16
CHD6-208ENST00000480022 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.79□□□□□ -1.16
CHD6-208ENST00000480022 SMIM26A0A096LP01 95 aa7.79□□□□□ -1.16
CHD6-208ENST00000480022 C16orf95Q9H693 158 aa7.79□□□□□ -1.16
CHD6-208ENST00000480022 NCR3O14931 201 aa7.79□□□□□ -1.16
CHD6-208ENST00000480022 IGHV1OR15-1A0A075B7D0 117 aa7.78□□□□□ -1.16
CHD6-208ENST00000480022 KNCNA6PVL3 124 aa7.78□□□□□ -1.16
CHD6-208ENST00000480022 H7BZZ5 65 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms