RNA–Protein interactions for RNA: ENST00000478616.1

SREBF1-212, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-212ENST00000478616 Q6ZRU5 148 aa11.8□□□□□ -0.52
SREBF1-212ENST00000478616 TMEM18Q96B42 140 aa11.8□□□□□ -0.52
SREBF1-212ENST00000478616 IGLV4-3A0A075B6K6 122 aa11.79□□□□□ -0.52
SREBF1-212ENST00000478616 TGIF2-C20orf24A0A0A6YYL0 155 aa11.79□□□□□ -0.52
SREBF1-212ENST00000478616 COX7A2LO14548 114 aa11.79□□□□□ -0.52
SREBF1-212ENST00000478616 CARD19Q96LW7 228 aa11.79□□□□□ -0.52
SREBF1-212ENST00000478616 LAMTOR2Q9Y2Q5 125 aa11.79□□□□□ -0.52
SREBF1-212ENST00000478616 SYCNQ0VAF6 134 aa11.78□□□□□ -0.52
SREBF1-212ENST00000478616 SMAGPQ0VAQ4 97 aa11.78□□□□□ -0.52
SREBF1-212ENST00000478616 ZC2HC1BQ5TFG8 222 aa11.78□□□□□ -0.52
SREBF1-212ENST00000478616 LINC00173Q6ZV60 143 aa11.78□□□□□ -0.52
SREBF1-212ENST00000478616 Q8N8P6 123 aa11.78□□□□□ -0.52
SREBF1-212ENST00000478616 YPEL4Q96NS1 127 aa11.78□□□□□ -0.52
SREBF1-212ENST00000478616 PYGO1Q9Y3Y4 419 aa11.78□□□□□ -0.52
SREBF1-212ENST00000478616 MAJINQ3KP22 176 aa11.77□□□□□ -0.53
SREBF1-212ENST00000478616 KIAA1644Q3SXP7 199 aa11.76□□□□□ -0.53
SREBF1-212ENST00000478616 CBLN2Q8IUK8 224 aa11.76□□□□□ -0.53
SREBF1-212ENST00000478616 GNB1LQ9BYB4 327 aa11.76□□□□□ -0.53
SREBF1-212ENST00000478616 MAP1LC3AQ9H492 121 aa11.76□□□□□ -0.53
SREBF1-212ENST00000478616 SMCO4Q9NRQ5 59 aa11.76□□□□□ -0.53
SREBF1-212ENST00000478616 TNXBP22105 4242 aa11.75□□□□□ -0.53
SREBF1-212ENST00000478616 ZNF561-AS1K7EIQ3 104 aa11.75□□□□□ -0.53
SREBF1-212ENST00000478616 COX19Q49B96 90 aa11.75□□□□□ -0.53
SREBF1-212ENST00000478616 LINC00242Q5T6M2 205 aa11.75□□□□□ -0.53
SREBF1-212ENST00000478616 STPG4Q8N801 248 aa11.75□□□□□ -0.53
SREBF1-212ENST00000478616 IFITM10A6NMD0 228 aa11.74□□□□□ -0.53
SREBF1-212ENST00000478616 IFI27P40305 119 aaPredicted RBP11.74□□□□□ -0.53
SREBF1-212ENST00000478616 C2orf48Q96LS8 159 aa11.74□□□□□ -0.53
SREBF1-212ENST00000478616 IGIPA6NJ69 53 aa11.73□□□□□ -0.53
SREBF1-212ENST00000478616 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.73□□□□□ -0.53
SREBF1-212ENST00000478616 RAB5AP20339 215 aa11.73□□□□□ -0.53
SREBF1-212ENST00000478616 MALP21145 153 aa11.73□□□□□ -0.53
SREBF1-212ENST00000478616 C10orf25Q5T742 122 aa11.73□□□□□ -0.53
SREBF1-212ENST00000478616 C2orf66Q6UXQ4 117 aa11.73□□□□□ -0.53
SREBF1-212ENST00000478616 A0A0J9YXV3 536 aa11.72□□□□□ -0.53
SREBF1-212ENST00000478616 PTTG1IPP53801 180 aa11.72□□□□□ -0.53
SREBF1-212ENST00000478616 SPAG11BQ08648 103 aa11.72□□□□□ -0.53
SREBF1-212ENST00000478616 KIAA0087Q14695 138 aa11.72□□□□□ -0.53
SREBF1-212ENST00000478616 DPH3Q96FX2 82 aa11.72□□□□□ -0.53
SREBF1-212ENST00000478616 AMELXQ99217 191 aa11.72□□□□□ -0.53
SREBF1-212ENST00000478616 A0A1W2PNN7 141 aa11.71□□□□□ -0.53
SREBF1-212ENST00000478616 J3QL48 77 aa11.71□□□□□ -0.53
SREBF1-212ENST00000478616 MT-ND6P03923 174 aa11.71□□□□□ -0.53
SREBF1-212ENST00000478616 UBE2D1P51668 147 aa11.71□□□□□ -0.53
SREBF1-212ENST00000478616 MRPL18Q9H0U6 180 aaKnown RBP11.71□□□□□ -0.53
SREBF1-212ENST00000478616 MT1HL1P0DM35 61 aa11.7□□□□□ -0.54
SREBF1-212ENST00000478616 OR10D4PQ8NGN7 298 aa11.7□□□□□ -0.54
SREBF1-212ENST00000478616 ORAOV1Q8WV07 137 aa11.7□□□□□ -0.54
SREBF1-212ENST00000478616 TMEM141Q96I45 108 aa11.7□□□□□ -0.54
SREBF1-212ENST00000478616 CAMK2N2Q96S95 79 aa11.7□□□□□ -0.54
SREBF1-212ENST00000478616 HMCN2Q8NDA2 5059 aa11.69□□□□□ -0.54
SREBF1-212ENST00000478616 A0A087WZ39 114 aa11.69□□□□□ -0.54
SREBF1-212ENST00000478616 OXTP01178 125 aa11.69□□□□□ -0.54
SREBF1-212ENST00000478616 FABP9Q0Z7S8 132 aa11.69□□□□□ -0.54
SREBF1-212ENST00000478616 CYSLTR1Q9Y271 337 aa11.69□□□□□ -0.54
SREBF1-212ENST00000478616 SCO1O75880 301 aa11.68□□□□□ -0.54
SREBF1-212ENST00000478616 APOMO95445 188 aa11.68□□□□□ -0.54
SREBF1-212ENST00000478616 ALKBH7Q9BT30 221 aaPredicted RBP11.68□□□□□ -0.54
SREBF1-212ENST00000478616 TRAPPC1Q9Y5R8 145 aa11.68□□□□□ -0.54
SREBF1-212ENST00000478616 LOC107984640A0A0U1RRK4 108 aa11.67□□□□□ -0.54
SREBF1-212ENST00000478616 LINC01546A6NGU7 62 aa11.67□□□□□ -0.54
SREBF1-212ENST00000478616 ATP6V1G1O75348 118 aa11.67□□□□□ -0.54
SREBF1-212ENST00000478616 PRR3P79522 188 aaKnown RBP11.67□□□□□ -0.54
SREBF1-212ENST00000478616 GAGE2BQ13066 116 aa11.67□□□□□ -0.54
SREBF1-212ENST00000478616 ORMDL2Q53FV1 153 aa11.67□□□□□ -0.54
SREBF1-212ENST00000478616 UNQ6190/PRO20217Q6UXQ8 127 aa11.67□□□□□ -0.54
SREBF1-212ENST00000478616 FAM19A3Q7Z5A8 133 aa11.67□□□□□ -0.54
SREBF1-212ENST00000478616 NXT2Q9NPJ8 142 aaKnown RBP11.67□□□□□ -0.54
SREBF1-212ENST00000478616 MRPL35Q9NZE8 188 aaKnown RBP11.67□□□□□ -0.54
SREBF1-212ENST00000478616 C6orf48Q9UBA6 75 aa11.67□□□□□ -0.54
SREBF1-212ENST00000478616 K7EMI3 77 aa11.66□□□□□ -0.54
SREBF1-212ENST00000478616 RNF151Q2KHN1 245 aa11.66□□□□□ -0.54
SREBF1-212ENST00000478616 TEX43Q6ZNM6 134 aa11.65□□□□□ -0.54
SREBF1-212ENST00000478616 KRTAP7-1Q8IUC3 87 aa11.65□□□□□ -0.54
SREBF1-212ENST00000478616 TOMM6Q96B49 74 aa11.64□□□□□ -0.55
SREBF1-212ENST00000478616 LINC00474Q9P2X8 69 aa11.64□□□□□ -0.55
SREBF1-212ENST00000478616 COLCA2A8K830 154 aa11.63□□□□□ -0.55
SREBF1-212ENST00000478616 NPSP0C0P6 89 aa11.63□□□□□ -0.55
SREBF1-212ENST00000478616 S100A1P23297 94 aa11.63□□□□□ -0.55
SREBF1-212ENST00000478616 URB1-AS1Q96HZ7 61 aa11.63□□□□□ -0.55
SREBF1-212ENST00000478616 C9orf116Q5BN46 136 aaPredicted RBP11.62□□□□□ -0.55
SREBF1-212ENST00000478616 C2orf82Q6UX34 121 aa11.62□□□□□ -0.55
SREBF1-212ENST00000478616 Q6ZRP5 223 aa11.62□□□□□ -0.55
SREBF1-212ENST00000478616 C7orf33Q8WU49 177 aa11.62□□□□□ -0.55
SREBF1-212ENST00000478616 TIMM17AQ99595 171 aa11.62□□□□□ -0.55
SREBF1-212ENST00000478616 TLX1NBP0CAT3 122 aa11.61□□□□□ -0.55
SREBF1-212ENST00000478616 KRTAP11-1Q8IUC1 163 aa11.61□□□□□ -0.55
SREBF1-212ENST00000478616 LINC01561Q8N1V8 128 aa11.61□□□□□ -0.55
SREBF1-212ENST00000478616 VCX2Q9H322 139 aa11.61□□□□□ -0.55
SREBF1-212ENST00000478616 FAM168BA1KXE4 195 aa11.6□□□□□ -0.55
SREBF1-212ENST00000478616 F8WDY8 70 aa11.6□□□□□ -0.55
SREBF1-212ENST00000478616 NDUFA1O15239 70 aa11.6□□□□□ -0.55
SREBF1-212ENST00000478616 RPL18AQ02543 176 aaKnown RBP11.6□□□□□ -0.55
SREBF1-212ENST00000478616 PKIGQ9Y2B9 76 aa11.6□□□□□ -0.55
SREBF1-212ENST00000478616 A0A096LNJ9 63 aa11.59□□□□□ -0.55
SREBF1-212ENST00000478616 SRSF9Q13242 221 aaKnown RBP eCLIP11.59□□□□□ -0.55
SREBF1-212ENST00000478616 CDKN2A-AS1Q9UH64 79 aa11.59□□□□□ -0.55
SREBF1-212ENST00000478616 PHF5AQ7RTV0 110 aaKnown RBP11.58□□□□□ -0.56
SREBF1-212ENST00000478616 C2orf88Q9BSF0 95 aa11.58□□□□□ -0.56
SREBF1-212ENST00000478616 TRGC2P03986 189 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 205.4 ms