RNA–Protein interactions for RNA: ENST00000478588.5

AFF4-208, Transcript of AF4/FMR2 family member 4, humanhuman

TSL 3

Gene AFF4, Length 897 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF4-208ENST00000478588 SS18L2Q9UHA2 77 aa2.89□□□□□ -1.95
AFF4-208ENST00000478588 DNAH3Q8TD57 4116 aa2.89□□□□□ -1.95
AFF4-208ENST00000478588 IGKV3-7A0A075B6H7 116 aa2.88□□□□□ -1.95
AFF4-208ENST00000478588 IGLV2-18A0A075B6J9 118 aa2.88□□□□□ -1.95
AFF4-208ENST00000478588 IGHV3-49A0A0A0MS15 119 aa2.88□□□□□ -1.95
AFF4-208ENST00000478588 TRAV12-1A0A0B4J245 112 aa2.88□□□□□ -1.95
AFF4-208ENST00000478588 LCE6AA0A183 80 aa2.88□□□□□ -1.95
AFF4-208ENST00000478588 LOC389332A0A1B0GUA5 103 aa2.88□□□□□ -1.95
AFF4-208ENST00000478588 A0A1W2PPM0 123 aa2.88□□□□□ -1.95
AFF4-208ENST00000478588 NUPR2A6NF83 97 aa2.88□□□□□ -1.95
AFF4-208ENST00000478588 K7EMI3 77 aa2.88□□□□□ -1.95
AFF4-208ENST00000478588 IGKCP01834 107 aa2.88□□□□□ -1.95
AFF4-208ENST00000478588 CRYGDP07320 174 aa2.88□□□□□ -1.95
AFF4-208ENST00000478588 FABP2P12104 132 aa2.88□□□□□ -1.95
AFF4-208ENST00000478588 ZNF80P51504 273 aaPredicted RBP2.88□□□□□ -1.95
AFF4-208ENST00000478588 SNRPD3P62318 126 aaKnown RBP2.88□□□□□ -1.95
AFF4-208ENST00000478588 DEFB135Q30KP9 77 aa2.88□□□□□ -1.95
AFF4-208ENST00000478588 C1orf195Q5TG92 126 aa2.88□□□□□ -1.95
AFF4-208ENST00000478588 KLK5Q9Y337 293 aaPredicted RBP2.88□□□□□ -1.95
AFF4-208ENST00000478588 LENEPQ9Y5L5 61 aa2.88□□□□□ -1.95
AFF4-208ENST00000478588 IGHV3OR16-13A0A075B7E8 117 aa2.87□□□□□ -1.95
AFF4-208ENST00000478588 IGKV2-40A0A087WW87 121 aaPredicted RBP2.87□□□□□ -1.95
AFF4-208ENST00000478588 A0A087WX48 190 aa2.87□□□□□ -1.95
AFF4-208ENST00000478588 TMSB15BA0A087X1C1 80 aa2.87□□□□□ -1.95
AFF4-208ENST00000478588 IGHV3-74A0A0B4J1X5 117 aa2.87□□□□□ -1.95
AFF4-208ENST00000478588 A0A0U1RQV1 116 aa2.87□□□□□ -1.95
AFF4-208ENST00000478588 A0A1B0GWB2 263 aa2.87□□□□□ -1.95
AFF4-208ENST00000478588 A0A1B0GX51 115 aa2.87□□□□□ -1.95
AFF4-208ENST00000478588 LINC01549A6NIU2 74 aa2.87□□□□□ -1.95
AFF4-208ENST00000478588 SMKR1H3BMG3 65 aa2.87□□□□□ -1.95
AFF4-208ENST00000478588 H3BUT2 72 aa2.87□□□□□ -1.95
AFF4-208ENST00000478588 J3KT08 172 aa2.87□□□□□ -1.95
AFF4-208ENST00000478588 J3QR89 54 aa2.87□□□□□ -1.95
AFF4-208ENST00000478588 DPM2O94777 84 aa2.87□□□□□ -1.95
AFF4-208ENST00000478588 IGKV2D-40P01614 121 aaPredicted RBP2.87□□□□□ -1.95
AFF4-208ENST00000478588 DEFB131AP59861 70 aa2.87□□□□□ -1.95
AFF4-208ENST00000478588 RPS28P62857 69 aaKnown RBP2.87□□□□□ -1.95
AFF4-208ENST00000478588 LAGE3Q14657 143 aa2.87□□□□□ -1.95
AFF4-208ENST00000478588 MORN3Q6PF18 240 aaPredicted RBP2.87□□□□□ -1.95
AFF4-208ENST00000478588 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.87□□□□□ -1.95
AFF4-208ENST00000478588 CEND1Q8N111 149 aa2.87□□□□□ -1.95
AFF4-208ENST00000478588 LINC00167Q96N53 147 aa2.87□□□□□ -1.95
AFF4-208ENST00000478588 MRPL16Q9NX20 251 aaKnown RBP2.87□□□□□ -1.95
AFF4-208ENST00000478588 HHLA3Q9XRX5 114 aa2.87□□□□□ -1.95
AFF4-208ENST00000478588 TIMM8BQ9Y5J9 83 aaPredicted RBP2.87□□□□□ -1.95
AFF4-208ENST00000478588 SPCS1Q9Y6A9 102 aa2.87□□□□□ -1.95
AFF4-208ENST00000478588 DNAH9Q9NYC9 4486 aa2.86□□□□□ -1.95
AFF4-208ENST00000478588 TRBV25-1A0A075B6N4 114 aa2.86□□□□□ -1.95
AFF4-208ENST00000478588 IGHV3-66A0A0C4DH42 116 aa2.86□□□□□ -1.95
AFF4-208ENST00000478588 IGLL5B9A064 214 aa2.86□□□□□ -1.95
AFF4-208ENST00000478588 E9PLD3 99 aa2.86□□□□□ -1.95
AFF4-208ENST00000478588 M0R381 172 aa2.86□□□□□ -1.95
AFF4-208ENST00000478588 ZNF688P0C7X2 276 aa2.86□□□□□ -1.95
AFF4-208ENST00000478588 PLNP26678 52 aa2.86□□□□□ -1.95
AFF4-208ENST00000478588 NMUP48645 174 aa2.86□□□□□ -1.95
AFF4-208ENST00000478588 ORMDL2Q53FV1 153 aa2.86□□□□□ -1.95
AFF4-208ENST00000478588 PCP2Q8IVA1 136 aa2.86□□□□□ -1.95
AFF4-208ENST00000478588 C20orf78Q9BR46 151 aa2.86□□□□□ -1.95
AFF4-208ENST00000478588 CHAC1Q9BUX1 264 aa2.86□□□□□ -1.95
AFF4-208ENST00000478588 C11orf68Q9H3H3 251 aaKnown RBP2.86□□□□□ -1.95
AFF4-208ENST00000478588 NBEAL2Q6ZNJ1 2754 aa2.85□□□□□ -1.95
AFF4-208ENST00000478588 COL7A1Q02388 2944 aa2.85□□□□□ -1.95
AFF4-208ENST00000478588 TRBV7-3A0A075B6L6 115 aa2.85□□□□□ -1.95
AFF4-208ENST00000478588 IGKV2D-26A0A0A0MRZ7 120 aa2.85□□□□□ -1.95
AFF4-208ENST00000478588 TRAV8-2A0A0B4J237 113 aa2.85□□□□□ -1.95
AFF4-208ENST00000478588 F8VRH5 84 aa2.85□□□□□ -1.95
AFF4-208ENST00000478588 F8W1H4 67 aa2.85□□□□□ -1.95
AFF4-208ENST00000478588 H7C1H1 209 aa2.85□□□□□ -1.95
AFF4-208ENST00000478588 PPP1R17O96001 155 aa2.85□□□□□ -1.95
AFF4-208ENST00000478588 MIFP14174 115 aa2.85□□□□□ -1.95
AFF4-208ENST00000478588 HLA-DMBP28068 263 aa2.85□□□□□ -1.95
AFF4-208ENST00000478588 FXYD2P54710 66 aa2.85□□□□□ -1.95
AFF4-208ENST00000478588 EMP1P54849 157 aa2.85□□□□□ -1.95
AFF4-208ENST00000478588 FXYD7P58549 80 aa2.85□□□□□ -1.95
AFF4-208ENST00000478588 RPL18AQ02543 176 aaKnown RBP2.85□□□□□ -1.95
AFF4-208ENST00000478588 ERCC8Q13216 396 aa2.85□□□□□ -1.95
AFF4-208ENST00000478588 CEMP1Q6PRD7 247 aaPredicted RBP2.85□□□□□ -1.95
AFF4-208ENST00000478588 FOXI2Q6ZQN5 318 aa2.85□□□□□ -1.95
AFF4-208ENST00000478588 FAM19A1Q7Z5A9 133 aa2.85□□□□□ -1.95
AFF4-208ENST00000478588 ATP6V0E2Q8NHE4 81 aa2.85□□□□□ -1.95
AFF4-208ENST00000478588 DCANP1Q8TF63 244 aa2.85□□□□□ -1.95
AFF4-208ENST00000478588 LINC00477Q96M19 166 aa2.85□□□□□ -1.95
AFF4-208ENST00000478588 SPANXDQ9BXN6 97 aa2.85□□□□□ -1.95
AFF4-208ENST00000478588 AGPAT4-IT1Q9H0P7 198 aa2.85□□□□□ -1.95
AFF4-208ENST00000478588 ERG28Q9UKR5 140 aa2.85□□□□□ -1.95
AFF4-208ENST00000478588 KNCNA6PVL3 124 aa2.84□□□□□ -1.95
AFF4-208ENST00000478588 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.84□□□□□ -1.95
AFF4-208ENST00000478588 NDUFC2O95298 119 aa2.84□□□□□ -1.95
AFF4-208ENST00000478588 LY6G6CO95867 125 aa2.84□□□□□ -1.95
AFF4-208ENST00000478588 C4orf26Q17RF5 130 aa2.84□□□□□ -1.95
AFF4-208ENST00000478588 RRN3P1Q2M238 152 aa2.84□□□□□ -1.95
AFF4-208ENST00000478588 C12orf74Q32Q52 190 aa2.84□□□□□ -1.95
AFF4-208ENST00000478588 MRPL55Q7Z7F7 128 aaKnown RBP2.84□□□□□ -1.95
AFF4-208ENST00000478588 C1orf158Q8N1D5 194 aa2.84□□□□□ -1.95
AFF4-208ENST00000478588 Q8TAT8 98 aa2.84□□□□□ -1.95
AFF4-208ENST00000478588 RAB37Q96AX2 223 aa2.84□□□□□ -1.95
AFF4-208ENST00000478588 TOMM6Q96B49 74 aa2.84□□□□□ -1.95
AFF4-208ENST00000478588 FAM19A4Q96LR4 140 aa2.84□□□□□ -1.95
AFF4-208ENST00000478588 C18orf15Q96N68 181 aa2.84□□□□□ -1.95
AFF4-208ENST00000478588 SMIM2Q9BVW6 85 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms