RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 C9orf163Q8N9P6 203 aa7.99□□□□□ -1.13
APTX-220ENST00000476858 URB1-AS1Q96HZ7 61 aa7.99□□□□□ -1.13
APTX-220ENST00000476858 SPANXA1Q9NS26 97 aa7.99□□□□□ -1.13
APTX-220ENST00000476858 CHTF8P0CG12 524 aa7.98□□□□□ -1.13
APTX-220ENST00000476858 CNBPP62633 177 aaKnown RBP7.98□□□□□ -1.13
APTX-220ENST00000476858 MRPS36P82909 103 aaKnown RBP7.98□□□□□ -1.13
APTX-220ENST00000476858 COX6A2Q02221 97 aa7.98□□□□□ -1.13
APTX-220ENST00000476858 CD164L2Q6UWJ8 174 aa7.98□□□□□ -1.13
APTX-220ENST00000476858 SDIM1Q6ZPB5 146 aa7.98□□□□□ -1.13
APTX-220ENST00000476858 KRTAP4-7Q9BYR0 210 aa7.98□□□□□ -1.13
APTX-220ENST00000476858 GVQW2A0A096LPI5 108 aaPredicted RBP7.97□□□□□ -1.13
APTX-220ENST00000476858 IGIPA6NJ69 53 aa7.97□□□□□ -1.13
APTX-220ENST00000476858 CIRBP-AS1Q8TBR5 109 aa7.97□□□□□ -1.13
APTX-220ENST00000476858 TMEM18Q96B42 140 aa7.97□□□□□ -1.13
APTX-220ENST00000476858 IFITM10A6NMD0 228 aa7.96□□□□□ -1.14
APTX-220ENST00000476858 C1orf196B1AJZ1 125 aa7.96□□□□□ -1.14
APTX-220ENST00000476858 Q5VSD8 79 aa7.96□□□□□ -1.14
APTX-220ENST00000476858 NXT2Q9NPJ8 142 aaKnown RBP7.96□□□□□ -1.14
APTX-220ENST00000476858 PYGO1Q9Y3Y4 419 aa7.96□□□□□ -1.14
APTX-220ENST00000476858 TRAPPC1Q9Y5R8 145 aa7.96□□□□□ -1.14
APTX-220ENST00000476858 VPS13BQ7Z7G8 4022 aa7.95□□□□□ -1.14
APTX-220ENST00000476858 LINC01546A6NGU7 62 aa7.95□□□□□ -1.14
APTX-220ENST00000476858 LINC00242Q5T6M2 205 aa7.95□□□□□ -1.14
APTX-220ENST00000476858 PRSS3P2Q8NHM4 247 aa7.95□□□□□ -1.14
APTX-220ENST00000476858 CHAC1Q9BUX1 264 aa7.95□□□□□ -1.14
APTX-220ENST00000476858 CYSLTR1Q9Y271 337 aa7.95□□□□□ -1.14
APTX-220ENST00000476858 A0A096LNJ9 63 aa7.94□□□□□ -1.14
APTX-220ENST00000476858 IGHV3OR16-9A0A0B4J2B5 98 aa7.94□□□□□ -1.14
APTX-220ENST00000476858 IGHV1-58A0A0C4DH39 117 aa7.94□□□□□ -1.14
APTX-220ENST00000476858 COX7A2LO14548 114 aa7.94□□□□□ -1.14
APTX-220ENST00000476858 MT-ND6P03923 174 aa7.94□□□□□ -1.14
APTX-220ENST00000476858 ORMDL2Q53FV1 153 aa7.94□□□□□ -1.14
APTX-220ENST00000476858 C18orf32Q8TCD1 76 aa7.94□□□□□ -1.14
APTX-220ENST00000476858 AMELXQ99217 191 aa7.94□□□□□ -1.14
APTX-220ENST00000476858 SRRM2Q9UQ35 2752 aaKnown RBP7.93□□□□□ -1.14
APTX-220ENST00000476858 IGLV4-69A0A075B6H9 119 aa7.93□□□□□ -1.14
APTX-220ENST00000476858 UBE2D1P51668 147 aa7.93□□□□□ -1.14
APTX-220ENST00000476858 PMCHL1Q16048 86 aa7.93□□□□□ -1.14
APTX-220ENST00000476858 CFAP161Q6P656 301 aa7.93□□□□□ -1.14
APTX-220ENST00000476858 TOMM6Q96B49 74 aa7.93□□□□□ -1.14
APTX-220ENST00000476858 TMEM141Q96I45 108 aa7.93□□□□□ -1.14
APTX-220ENST00000476858 AP5S1Q9NUS5 200 aa7.93□□□□□ -1.14
APTX-220ENST00000476858 EPM2AB3EWF7 344 aa7.92□□□□□ -1.14
APTX-220ENST00000476858 SMAGPQ0VAQ4 97 aa7.92□□□□□ -1.14
APTX-220ENST00000476858 COX19Q49B96 90 aa7.92□□□□□ -1.14
APTX-220ENST00000476858 Q6ZRU5 148 aa7.92□□□□□ -1.14
APTX-220ENST00000476858 IGHV3-64A0A075B6Q5 118 aa7.91□□□□□ -1.14
APTX-220ENST00000476858 A0A0J9YXV3 536 aa7.91□□□□□ -1.14
APTX-220ENST00000476858 SCO1O75880 301 aa7.91□□□□□ -1.14
APTX-220ENST00000476858 GHRHP01286 108 aa7.91□□□□□ -1.14
APTX-220ENST00000476858 KRTAP10-4P60372 401 aaPredicted RBP7.91□□□□□ -1.14
APTX-220ENST00000476858 C10orf25Q5T742 122 aa7.91□□□□□ -1.14
APTX-220ENST00000476858 A0A096LNI7 61 aa7.9□□□□□ -1.14
APTX-220ENST00000476858 K7EMI3 77 aa7.9□□□□□ -1.14
APTX-220ENST00000476858 MALP21145 153 aa7.9□□□□□ -1.14
APTX-220ENST00000476858 CIRBPQ14011 172 aaKnown RBP7.9□□□□□ -1.14
APTX-220ENST00000476858 TEX43Q6ZNM6 134 aa7.9□□□□□ -1.14
APTX-220ENST00000476858 FA2HQ7L5A8 372 aa7.9□□□□□ -1.14
APTX-220ENST00000476858 SCGB3A1Q96QR1 104 aa7.9□□□□□ -1.14
APTX-220ENST00000476858 IGKV2-24A0A0C4DH68 120 aa7.89□□□□□ -1.15
APTX-220ENST00000476858 SPAG11BQ08648 103 aa7.89□□□□□ -1.15
APTX-220ENST00000476858 KIAA0087Q14695 138 aa7.89□□□□□ -1.15
APTX-220ENST00000476858 SPACA4Q8TDM5 124 aa7.89□□□□□ -1.15
APTX-220ENST00000476858 ORAOV1Q8WV07 137 aa7.89□□□□□ -1.15
APTX-220ENST00000476858 CARD19Q96LW7 228 aa7.89□□□□□ -1.15
APTX-220ENST00000476858 VCX2Q9H322 139 aa7.89□□□□□ -1.15
APTX-220ENST00000476858 SMCO4Q9NRQ5 59 aa7.89□□□□□ -1.15
APTX-220ENST00000476858 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.88□□□□□ -1.15
APTX-220ENST00000476858 ZNF561-AS1K7EIQ3 104 aa7.88□□□□□ -1.15
APTX-220ENST00000476858 SYCNQ0VAF6 134 aa7.88□□□□□ -1.15
APTX-220ENST00000476858 ERASQ7Z444 233 aa7.88□□□□□ -1.15
APTX-220ENST00000476858 TIMM17AQ99595 171 aa7.88□□□□□ -1.15
APTX-220ENST00000476858 A0A087WYN8 130 aa7.87□□□□□ -1.15
APTX-220ENST00000476858 A0A087WZ39 114 aa7.87□□□□□ -1.15
APTX-220ENST00000476858 COLCA2A8K830 154 aa7.87□□□□□ -1.15
APTX-220ENST00000476858 TRGC2P03986 189 aa7.87□□□□□ -1.15
APTX-220ENST00000476858 LINC00614P0C842 121 aa7.86□□□□□ -1.15
APTX-220ENST00000476858 LINC00310P59036 64 aa7.86□□□□□ -1.15
APTX-220ENST00000476858 C2orf82Q6UX34 121 aa7.86□□□□□ -1.15
APTX-220ENST00000476858 UNQ6190/PRO20217Q6UXQ8 127 aa7.86□□□□□ -1.15
APTX-220ENST00000476858 Q6ZN92 141 aa7.86□□□□□ -1.15
APTX-220ENST00000476858 FAM19A3Q7Z5A8 133 aa7.86□□□□□ -1.15
APTX-220ENST00000476858 CAMK2N2Q96S95 79 aa7.86□□□□□ -1.15
APTX-220ENST00000476858 CDKN2A-AS1Q9UH64 79 aa7.86□□□□□ -1.15
APTX-220ENST00000476858 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.85□□□□□ -1.15
APTX-220ENST00000476858 HNRNPA3P51991 378 aaKnown RBP7.85□□□□□ -1.15
APTX-220ENST00000476858 MAJINQ3KP22 176 aa7.85□□□□□ -1.15
APTX-220ENST00000476858 PDZD11Q5EBL8 140 aa7.85□□□□□ -1.15
APTX-220ENST00000476858 C2orf88Q9BSF0 95 aa7.85□□□□□ -1.15
APTX-220ENST00000476858 CST9LQ9H4G1 147 aa7.85□□□□□ -1.15
APTX-220ENST00000476858 NPSP0C0P6 89 aa7.84□□□□□ -1.15
APTX-220ENST00000476858 INAFM2P0DMQ5 153 aa7.84□□□□□ -1.15
APTX-220ENST00000476858 OR10D4PQ8NGN7 298 aa7.84□□□□□ -1.15
APTX-220ENST00000476858 C2orf48Q96LS8 159 aa7.84□□□□□ -1.15
APTX-220ENST00000476858 C6orf48Q9UBA6 75 aa7.84□□□□□ -1.15
APTX-220ENST00000476858 MYCBP2O75592 4640 aa7.84□□□□□ -1.15
APTX-220ENST00000476858 NUPR1O60356 82 aa7.83□□□□□ -1.16
APTX-220ENST00000476858 APOMO95445 188 aa7.83□□□□□ -1.16
APTX-220ENST00000476858 GAGE2BQ13066 116 aa7.83□□□□□ -1.16
APTX-220ENST00000476858 C9orf116Q5BN46 136 aaPredicted RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms