RNA–Protein interactions for RNA: ENST00000476466.1

SLC6A8-209, Transcript of solute carrier family 6 member 8, humanhuman

TSL 3

Gene SLC6A8, Length 470 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-209ENST00000476466 DPH3Q96FX2 82 aa8.84□□□□□ -0.99
SLC6A8-209ENST00000476466 TMEM218A2RU14 115 aa8.83□□□□□ -1
SLC6A8-209ENST00000476466 ZNF561-AS1K7EIQ3 104 aa8.83□□□□□ -1
SLC6A8-209ENST00000476466 MALP21145 153 aa8.83□□□□□ -1
SLC6A8-209ENST00000476466 SMAGPQ0VAQ4 97 aa8.83□□□□□ -1
SLC6A8-209ENST00000476466 A0A0J9YXV3 536 aa8.82□□□□□ -1
SLC6A8-209ENST00000476466 IFITM10A6NMD0 228 aa8.82□□□□□ -1
SLC6A8-209ENST00000476466 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.82□□□□□ -1
SLC6A8-209ENST00000476466 MT1HL1P0DM35 61 aa8.82□□□□□ -1
SLC6A8-209ENST00000476466 SPAG11BQ08648 103 aa8.82□□□□□ -1
SLC6A8-209ENST00000476466 LINC00173Q6ZV60 143 aa8.82□□□□□ -1
SLC6A8-209ENST00000476466 OXTP01178 125 aa8.81□□□□□ -1
SLC6A8-209ENST00000476466 PTTG1IPP53801 180 aa8.81□□□□□ -1
SLC6A8-209ENST00000476466 C10orf25Q5T742 122 aa8.81□□□□□ -1
SLC6A8-209ENST00000476466 COMMD7Q86VX2 200 aa8.81□□□□□ -1
SLC6A8-209ENST00000476466 MAP1LC3AQ9H492 121 aa8.81□□□□□ -1
SLC6A8-209ENST00000476466 LAMTOR2Q9Y2Q5 125 aa8.81□□□□□ -1
SLC6A8-209ENST00000476466 A0A1W2PNN7 141 aa8.8□□□□□ -1
SLC6A8-209ENST00000476466 RAB5AP20339 215 aa8.8□□□□□ -1
SLC6A8-209ENST00000476466 PRR3P79522 188 aaKnown RBP8.8□□□□□ -1
SLC6A8-209ENST00000476466 KIAA1644Q3SXP7 199 aa8.8□□□□□ -1
SLC6A8-209ENST00000476466 Q8N8P6 123 aa8.8□□□□□ -1
SLC6A8-209ENST00000476466 ORAOV1Q8WV07 137 aa8.8□□□□□ -1
SLC6A8-209ENST00000476466 C2orf48Q96LS8 159 aa8.8□□□□□ -1
SLC6A8-209ENST00000476466 CAMK2N2Q96S95 79 aa8.8□□□□□ -1
SLC6A8-209ENST00000476466 PYGO1Q9Y3Y4 419 aa8.8□□□□□ -1
SLC6A8-209ENST00000476466 IFI27P40305 119 aaPredicted RBP8.79□□□□□ -1
SLC6A8-209ENST00000476466 GAGE2BQ13066 116 aa8.79□□□□□ -1
SLC6A8-209ENST00000476466 LINC00242Q5T6M2 205 aa8.79□□□□□ -1
SLC6A8-209ENST00000476466 IMMP2LQ96T52 175 aa8.79□□□□□ -1
SLC6A8-209ENST00000476466 APOMO95445 188 aa8.78□□□□□ -1
SLC6A8-209ENST00000476466 UBE2D1P51668 147 aa8.78□□□□□ -1
SLC6A8-209ENST00000476466 C2orf66Q6UXQ4 117 aa8.78□□□□□ -1
SLC6A8-209ENST00000476466 TMEM141Q96I45 108 aa8.78□□□□□ -1
SLC6A8-209ENST00000476466 SEC11CQ9BY50 192 aa8.78□□□□□ -1
SLC6A8-209ENST00000476466 LOC107984640A0A0U1RRK4 108 aa8.77□□□□□ -1.01
SLC6A8-209ENST00000476466 IGIPA6NJ69 53 aa8.77□□□□□ -1.01
SLC6A8-209ENST00000476466 KIAA0087Q14695 138 aa8.77□□□□□ -1.01
SLC6A8-209ENST00000476466 OR10D4PQ8NGN7 298 aa8.77□□□□□ -1.01
SLC6A8-209ENST00000476466 C7orf33Q8WU49 177 aa8.77□□□□□ -1.01
SLC6A8-209ENST00000476466 CTDSP1Q9GZU7 261 aa8.77□□□□□ -1.01
SLC6A8-209ENST00000476466 AMELXQ99217 191 aa8.76□□□□□ -1.01
SLC6A8-209ENST00000476466 LINC00474Q9P2X8 69 aa8.76□□□□□ -1.01
SLC6A8-209ENST00000476466 C6orf48Q9UBA6 75 aa8.76□□□□□ -1.01
SLC6A8-209ENST00000476466 CYSLTR1Q9Y271 337 aa8.76□□□□□ -1.01
SLC6A8-209ENST00000476466 A0A087WZ39 114 aa8.75□□□□□ -1.01
SLC6A8-209ENST00000476466 RPL18AQ02543 176 aaKnown RBP8.75□□□□□ -1.01
SLC6A8-209ENST00000476466 C10orf91Q5T1B1 145 aa8.75□□□□□ -1.01
SLC6A8-209ENST00000476466 UNQ6190/PRO20217Q6UXQ8 127 aa8.75□□□□□ -1.01
SLC6A8-209ENST00000476466 C9orf116Q5BN46 136 aaPredicted RBP8.74□□□□□ -1.01
SLC6A8-209ENST00000476466 TEX43Q6ZNM6 134 aa8.74□□□□□ -1.01
SLC6A8-209ENST00000476466 MRPL35Q9NZE8 188 aaKnown RBP8.74□□□□□ -1.01
SLC6A8-209ENST00000476466 UBR4Q5T4S7 5183 aa8.73□□□□□ -1.01
SLC6A8-209ENST00000476466 TRAV9-1A0A075B6T8 112 aa8.73□□□□□ -1.01
SLC6A8-209ENST00000476466 TGIF2-C20orf24A0A0A6YYL0 155 aa8.73□□□□□ -1.01
SLC6A8-209ENST00000476466 FAM168BA1KXE4 195 aa8.73□□□□□ -1.01
SLC6A8-209ENST00000476466 ODF1Q14990 250 aa8.73□□□□□ -1.01
SLC6A8-209ENST00000476466 ORMDL2Q53FV1 153 aa8.73□□□□□ -1.01
SLC6A8-209ENST00000476466 C2orf82Q6UX34 121 aa8.73□□□□□ -1.01
SLC6A8-209ENST00000476466 Q6ZRP5 223 aa8.73□□□□□ -1.01
SLC6A8-209ENST00000476466 KRTAP7-1Q8IUC3 87 aa8.73□□□□□ -1.01
SLC6A8-209ENST00000476466 NXT2Q9NPJ8 142 aaKnown RBP8.73□□□□□ -1.01
SLC6A8-209ENST00000476466 RNF151Q2KHN1 245 aa8.72□□□□□ -1.01
SLC6A8-209ENST00000476466 KRTAP11-1Q8IUC1 163 aa8.72□□□□□ -1.01
SLC6A8-209ENST00000476466 PKIGQ9Y2B9 76 aa8.72□□□□□ -1.01
SLC6A8-209ENST00000476466 CARHSP1Q9Y2V2 147 aaKnown RBP8.72□□□□□ -1.01
SLC6A8-209ENST00000476466 LRP2P98164 4655 aa8.72□□□□□ -1.01
SLC6A8-209ENST00000476466 LOC105371267A0A1B0GV96 52 aa8.71□□□□□ -1.02
SLC6A8-209ENST00000476466 NDUFA1O15239 70 aa8.71□□□□□ -1.02
SLC6A8-209ENST00000476466 PHF5AQ7RTV0 110 aaKnown RBP8.71□□□□□ -1.02
SLC6A8-209ENST00000476466 TOMM6Q96B49 74 aa8.71□□□□□ -1.02
SLC6A8-209ENST00000476466 ALKBH7Q9BT30 221 aaPredicted RBP8.71□□□□□ -1.02
SLC6A8-209ENST00000476466 K7EMI3 77 aa8.7□□□□□ -1.02
SLC6A8-209ENST00000476466 TLX1NBP0CAT3 122 aa8.7□□□□□ -1.02
SLC6A8-209ENST00000476466 FAM19A3Q7Z5A8 133 aa8.7□□□□□ -1.02
SLC6A8-209ENST00000476466 SVBPQ8N300 66 aa8.7□□□□□ -1.02
SLC6A8-209ENST00000476466 C2orf88Q9BSF0 95 aa8.7□□□□□ -1.02
SLC6A8-209ENST00000476466 GNB1LQ9BYB4 327 aa8.7□□□□□ -1.02
SLC6A8-209ENST00000476466 TMA7Q9Y2S6 64 aaKnown RBP8.7□□□□□ -1.02
SLC6A8-209ENST00000476466 LINC01546A6NGU7 62 aa8.69□□□□□ -1.02
SLC6A8-209ENST00000476466 SERTAD4-AS1Q5TG53 156 aa8.69□□□□□ -1.02
SLC6A8-209ENST00000476466 Q6ZN92 141 aa8.69□□□□□ -1.02
SLC6A8-209ENST00000476466 TIMM17AQ99595 171 aa8.69□□□□□ -1.02
SLC6A8-209ENST00000476466 VCX2Q9H322 139 aa8.69□□□□□ -1.02
SLC6A8-209ENST00000476466 F8WDY8 70 aa8.68□□□□□ -1.02
SLC6A8-209ENST00000476466 SNAPINO95295 136 aa8.68□□□□□ -1.02
SLC6A8-209ENST00000476466 NPSP0C0P6 89 aa8.68□□□□□ -1.02
SLC6A8-209ENST00000476466 SRSF9Q13242 221 aaKnown RBP eCLIP8.68□□□□□ -1.02
SLC6A8-209ENST00000476466 RPS10P5Q9NQ39 176 aa8.68□□□□□ -1.02
SLC6A8-209ENST00000476466 CDKN2A-AS1Q9UH64 79 aa8.68□□□□□ -1.02
SLC6A8-209ENST00000476466 PSORS1C2Q9UIG4 136 aa8.68□□□□□ -1.02
SLC6A8-209ENST00000476466 S100PP25815 95 aa8.67□□□□□ -1.02
SLC6A8-209ENST00000476466 RHEBQ15382 184 aa8.67□□□□□ -1.02
SLC6A8-209ENST00000476466 GAGE2EQ4V326 116 aa8.67□□□□□ -1.02
SLC6A8-209ENST00000476466 LINC01561Q8N1V8 128 aa8.67□□□□□ -1.02
SLC6A8-209ENST00000476466 MRPL18Q9H0U6 180 aaKnown RBP8.67□□□□□ -1.02
SLC6A8-209ENST00000476466 GAGE2DQ9UEU5 116 aa8.67□□□□□ -1.02
SLC6A8-209ENST00000476466 A0A096LNJ9 63 aa8.66□□□□□ -1.02
SLC6A8-209ENST00000476466 C9orf129Q5T035 196 aaKnown RBP8.66□□□□□ -1.02
SLC6A8-209ENST00000476466 URB1-AS1Q96HZ7 61 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 147.8 ms