RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 C2orf88Q9BSF0 95 aa7.82□□□□□ -1.16
CLIP2-204ENST00000474962 VCX2Q9H322 139 aa7.82□□□□□ -1.16
CLIP2-204ENST00000474962 TRAV13-1A0A0B4J241 112 aa7.81□□□□□ -1.16
CLIP2-204ENST00000474962 LINC00959A0A1B0GUT2 108 aa7.81□□□□□ -1.16
CLIP2-204ENST00000474962 C1orf196B1AJZ1 125 aa7.81□□□□□ -1.16
CLIP2-204ENST00000474962 LECT2O14960 151 aa7.81□□□□□ -1.16
CLIP2-204ENST00000474962 HBDP02042 147 aa7.81□□□□□ -1.16
CLIP2-204ENST00000474962 NPSP0C0P6 89 aa7.81□□□□□ -1.16
CLIP2-204ENST00000474962 TEX43Q6ZNM6 134 aa7.81□□□□□ -1.16
CLIP2-204ENST00000474962 ERASQ7Z444 233 aa7.81□□□□□ -1.16
CLIP2-204ENST00000474962 NTN5Q8WTR8 489 aaPredicted RBP7.81□□□□□ -1.16
CLIP2-204ENST00000474962 CHCHD10Q8WYQ3 142 aaPredicted RBP7.81□□□□□ -1.16
CLIP2-204ENST00000474962 OPRPNQ99935 248 aaPredicted RBP7.81□□□□□ -1.16
CLIP2-204ENST00000474962 FLG2Q5D862 2391 aaPredicted RBP7.8□□□□□ -1.16
CLIP2-204ENST00000474962 IFITM10A6NMD0 228 aa7.8□□□□□ -1.16
CLIP2-204ENST00000474962 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.8□□□□□ -1.16
CLIP2-204ENST00000474962 BAALCQ8WXS3 180 aa7.8□□□□□ -1.16
CLIP2-204ENST00000474962 TIMM17AQ99595 171 aa7.8□□□□□ -1.16
CLIP2-204ENST00000474962 IGLV4-3A0A075B6K6 122 aa7.79□□□□□ -1.16
CLIP2-204ENST00000474962 GAGE12HA6NDE8 117 aa7.79□□□□□ -1.16
CLIP2-204ENST00000474962 IGIPA6NJ69 53 aa7.79□□□□□ -1.16
CLIP2-204ENST00000474962 XCL1P47992 114 aa7.79□□□□□ -1.16
CLIP2-204ENST00000474962 PMCHL1Q16048 86 aa7.79□□□□□ -1.16
CLIP2-204ENST00000474962 URB1-AS1Q96HZ7 61 aa7.79□□□□□ -1.16
CLIP2-204ENST00000474962 DMBT1Q9UGM3 2413 aaPredicted RBP7.78□□□□□ -1.16
CLIP2-204ENST00000474962 C14orf177Q52M58 125 aa7.78□□□□□ -1.16
CLIP2-204ENST00000474962 CFAP161Q6P656 301 aa7.78□□□□□ -1.16
CLIP2-204ENST00000474962 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.77□□□□□ -1.17
CLIP2-204ENST00000474962 HIST1H2BKO60814 126 aa7.77□□□□□ -1.17
CLIP2-204ENST00000474962 SERF1AO75920 110 aa7.77□□□□□ -1.17
CLIP2-204ENST00000474962 ATP5LO75964 103 aa7.77□□□□□ -1.17
CLIP2-204ENST00000474962 HIST1H2BJP06899 126 aa7.77□□□□□ -1.17
CLIP2-204ENST00000474962 MALP21145 153 aa7.77□□□□□ -1.17
CLIP2-204ENST00000474962 HIST1H2BOP23527 126 aa7.77□□□□□ -1.17
CLIP2-204ENST00000474962 HIST1H2BBP33778 126 aa7.77□□□□□ -1.17
CLIP2-204ENST00000474962 NDUFA6P56556 154 aa7.77□□□□□ -1.17
CLIP2-204ENST00000474962 HIST1H2BDP58876 126 aa7.77□□□□□ -1.17
CLIP2-204ENST00000474962 HIST1H2BCP62807 126 aa7.77□□□□□ -1.17
CLIP2-204ENST00000474962 HIST2H2BEQ16778 126 aa7.77□□□□□ -1.17
CLIP2-204ENST00000474962 LINC01620Q4KN68 170 aa7.77□□□□□ -1.17
CLIP2-204ENST00000474962 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.77□□□□□ -1.17
CLIP2-204ENST00000474962 CD164L2Q6UWJ8 174 aa7.77□□□□□ -1.17
CLIP2-204ENST00000474962 HIST1H2BHQ93079 126 aa7.77□□□□□ -1.17
CLIP2-204ENST00000474962 HIST1H2BNQ99877 126 aa7.77□□□□□ -1.17
CLIP2-204ENST00000474962 HIST1H2BMQ99879 126 aa7.77□□□□□ -1.17
CLIP2-204ENST00000474962 SEC11AP67812 179 aa7.76□□□□□ -1.17
CLIP2-204ENST00000474962 FAM19A2Q8N3H0 131 aa7.76□□□□□ -1.17
CLIP2-204ENST00000474962 USP17L23D6RBM5 183 aa7.75□□□□□ -1.17
CLIP2-204ENST00000474962 PRSS1P07477 247 aa7.75□□□□□ -1.17
CLIP2-204ENST00000474962 FAM104AQ969W3 186 aa7.75□□□□□ -1.17
CLIP2-204ENST00000474962 AMELXQ99217 191 aa7.75□□□□□ -1.17
CLIP2-204ENST00000474962 A0A096LNJ9 63 aa7.74□□□□□ -1.17
CLIP2-204ENST00000474962 COX7A2LO14548 114 aa7.74□□□□□ -1.17
CLIP2-204ENST00000474962 LEPROTL1O95214 131 aa7.74□□□□□ -1.17
CLIP2-204ENST00000474962 APOMO95445 188 aa7.74□□□□□ -1.17
CLIP2-204ENST00000474962 PMVKQ15126 192 aa7.74□□□□□ -1.17
CLIP2-204ENST00000474962 PDZD11Q5EBL8 140 aa7.74□□□□□ -1.17
CLIP2-204ENST00000474962 ZC2HC1BQ5TFG8 222 aa7.74□□□□□ -1.17
CLIP2-204ENST00000474962 KRTAP26-1Q6PEX3 210 aa7.74□□□□□ -1.17
CLIP2-204ENST00000474962 GEMIN7Q9H840 131 aaKnown RBP7.74□□□□□ -1.17
CLIP2-204ENST00000474962 hDV102S1A0JD36 115 aa7.73□□□□□ -1.17
CLIP2-204ENST00000474962 UBE2D1P51668 147 aa7.73□□□□□ -1.17
CLIP2-204ENST00000474962 FOXI1Q12951 378 aa7.73□□□□□ -1.17
CLIP2-204ENST00000474962 C5orf38Q86SI9 138 aa7.73□□□□□ -1.17
CLIP2-204ENST00000474962 IFI27L1Q96BM0 104 aa7.73□□□□□ -1.17
CLIP2-204ENST00000474962 IGHV1-58A0A0C4DH39 117 aa7.72□□□□□ -1.17
CLIP2-204ENST00000474962 HERVK_113P63121 156 aa7.72□□□□□ -1.17
CLIP2-204ENST00000474962 LINC00242Q5T6M2 205 aa7.72□□□□□ -1.17
CLIP2-204ENST00000474962 Q6ZSA8 131 aa7.72□□□□□ -1.17
CLIP2-204ENST00000474962 LINC00173Q6ZV60 143 aa7.72□□□□□ -1.17
CLIP2-204ENST00000474962 CST9LQ9H4G1 147 aa7.72□□□□□ -1.17
CLIP2-204ENST00000474962 HSPB8Q9UJY1 196 aa7.72□□□□□ -1.17
CLIP2-204ENST00000474962 ZNF561-AS1K7EIQ3 104 aa7.71□□□□□ -1.18
CLIP2-204ENST00000474962 NUPR1O60356 82 aa7.71□□□□□ -1.18
CLIP2-204ENST00000474962 FABP4P15090 132 aa7.71□□□□□ -1.18
CLIP2-204ENST00000474962 A0A0J9YXV3 536 aa7.7□□□□□ -1.18
CLIP2-204ENST00000474962 S100A6P06703 90 aa7.7□□□□□ -1.18
CLIP2-204ENST00000474962 LINC00310P59036 64 aa7.7□□□□□ -1.18
CLIP2-204ENST00000474962 PACRGQ96M98 296 aaPredicted RBP7.7□□□□□ -1.18
CLIP2-204ENST00000474962 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.69□□□□□ -1.18
CLIP2-204ENST00000474962 IGHV3OR16-9A0A0B4J2B5 98 aa7.69□□□□□ -1.18
CLIP2-204ENST00000474962 TINCRA0A1B0GVN0 87 aa7.69□□□□□ -1.18
CLIP2-204ENST00000474962 H0Y8G0 127 aa7.69□□□□□ -1.18
CLIP2-204ENST00000474962 COX6A2Q02221 97 aa7.69□□□□□ -1.18
CLIP2-204ENST00000474962 HIGD2BQ4VC39 106 aa7.69□□□□□ -1.18
CLIP2-204ENST00000474962 FAM19A3Q7Z5A8 133 aa7.69□□□□□ -1.18
CLIP2-204ENST00000474962 LINC00469Q8N7U9 141 aa7.69□□□□□ -1.18
CLIP2-204ENST00000474962 A0A087WZ39 114 aa7.68□□□□□ -1.18
CLIP2-204ENST00000474962 H3BRM9 83 aa7.68□□□□□ -1.18
CLIP2-204ENST00000474962 SCXQ7RTU7 201 aa7.68□□□□□ -1.18
CLIP2-204ENST00000474962 C15orf56Q8N910 161 aa7.68□□□□□ -1.18
CLIP2-204ENST00000474962 MAP1LC3CQ9BXW4 147 aa7.68□□□□□ -1.18
CLIP2-204ENST00000474962 CHTOPQ9Y3Y2 248 aaKnown RBP7.68□□□□□ -1.18
CLIP2-204ENST00000474962 GVQW2A0A096LPI5 108 aaPredicted RBP7.67□□□□□ -1.18
CLIP2-204ENST00000474962 TRAV12-1A0A0B4J245 112 aa7.67□□□□□ -1.18
CLIP2-204ENST00000474962 COA6Q5JTJ3 125 aaKnown RBP7.67□□□□□ -1.18
CLIP2-204ENST00000474962 ORAOV1Q8WV07 137 aa7.67□□□□□ -1.18
CLIP2-204ENST00000474962 CHAC1Q9BUX1 264 aa7.67□□□□□ -1.18
CLIP2-204ENST00000474962 PLA2G1BP04054 148 aaKnown RBP7.66□□□□□ -1.18
CLIP2-204ENST00000474962 PRSS2P07478 247 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms