RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 CYP4F30PQ9H0H9 118 aa5.24□□□□□ -1.57
GPNMB-209ENST00000474157 NDUFA4L2Q9NRX3 87 aa5.24□□□□□ -1.57
GPNMB-209ENST00000474157 FLNAP21333 2647 aaKnown RBP5.24□□□□□ -1.57
GPNMB-209ENST00000474157 HIVEP2P31629 2446 aa5.23□□□□□ -1.57
GPNMB-209ENST00000474157 IGHV3-20A0A0C4DH32 117 aa5.23□□□□□ -1.57
GPNMB-209ENST00000474157 TMEM256-PLSCR3K7ERE1 68 aa5.23□□□□□ -1.57
GPNMB-209ENST00000474157 M0R1W7 72 aa5.23□□□□□ -1.57
GPNMB-209ENST00000474157 DEFB113Q30KQ7 82 aa5.23□□□□□ -1.57
GPNMB-209ENST00000474157 C7orf65Q6ZTY9 151 aa5.23□□□□□ -1.57
GPNMB-209ENST00000474157 DIRC1Q969H9 104 aa5.23□□□□□ -1.57
GPNMB-209ENST00000474157 CCL13Q99616 98 aa5.23□□□□□ -1.57
GPNMB-209ENST00000474157 SMAD5-AS1Q9Y6J3 95 aa5.23□□□□□ -1.57
GPNMB-209ENST00000474157 DYSFO75923 2080 aa5.23□□□□□ -1.57
GPNMB-209ENST00000474157 TRAV23DV6A0A075B6W5 121 aa5.22□□□□□ -1.57
GPNMB-209ENST00000474157 A0A087WVE0 104 aa5.22□□□□□ -1.57
GPNMB-209ENST00000474157 IGKV3D-11A0A0A0MRZ8 115 aa5.22□□□□□ -1.57
GPNMB-209ENST00000474157 LOC100131303A0A0U1RQF7 123 aa5.22□□□□□ -1.57
GPNMB-209ENST00000474157 F6UB75 175 aa5.22□□□□□ -1.57
GPNMB-209ENST00000474157 TRBV12-3P01733 135 aa5.22□□□□□ -1.57
GPNMB-209ENST00000474157 FUSP35637 526 aaKnown RBP eCLIP5.22□□□□□ -1.57
GPNMB-209ENST00000474157 ZNF833PQ6ZTB9 187 aa5.22□□□□□ -1.57
GPNMB-209ENST00000474157 LITAFQ99732 161 aa5.22□□□□□ -1.57
GPNMB-209ENST00000474157 DCTN5Q9BTE1 182 aa5.22□□□□□ -1.57
GPNMB-209ENST00000474157 IGKV1D-17A0A075B6S4 117 aa5.21□□□□□ -1.58
GPNMB-209ENST00000474157 IGHV4OR15-8A0A075B7B6 117 aa5.21□□□□□ -1.58
GPNMB-209ENST00000474157 A0A087WW49 117 aa5.21□□□□□ -1.58
GPNMB-209ENST00000474157 RNASE4P34096 147 aaKnown RBP5.21□□□□□ -1.58
GPNMB-209ENST00000474157 ASB16-AS1Q495Z4 193 aa5.21□□□□□ -1.58
GPNMB-209ENST00000474157 ADAMTSL4-AS1Q5T5F5 129 aa5.21□□□□□ -1.58
GPNMB-209ENST00000474157 LINC01560Q8TB33 94 aa5.21□□□□□ -1.58
GPNMB-209ENST00000474157 MRPL36Q9P0J6 103 aaKnown RBP5.21□□□□□ -1.58
GPNMB-209ENST00000474157 C22orf24Q9Y442 160 aa5.21□□□□□ -1.58
GPNMB-209ENST00000474157 MED12Q93074 2177 aa5.21□□□□□ -1.58
GPNMB-209ENST00000474157 ZGRF1Q86YA3 2104 aa5.2□□□□□ -1.58
GPNMB-209ENST00000474157 hDV103S1A0JD37 113 aa5.2□□□□□ -1.58
GPNMB-209ENST00000474157 H3BQ85 93 aa5.2□□□□□ -1.58
GPNMB-209ENST00000474157 TSPEAR-AS2P59090 65 aa5.2□□□□□ -1.58
GPNMB-209ENST00000474157 NKAPP1Q8N9T2 125 aa5.2□□□□□ -1.58
GPNMB-209ENST00000474157 TMEM167AQ8TBQ9 72 aa5.2□□□□□ -1.58
GPNMB-209ENST00000474157 FGF23Q9GZV9 251 aaPredicted RBP5.2□□□□□ -1.58
GPNMB-209ENST00000474157 Q9H8V8 135 aa5.2□□□□□ -1.58
GPNMB-209ENST00000474157 MXRA5Q9NR99 2828 aa5.2□□□□□ -1.58
GPNMB-209ENST00000474157 TRBV7-4A0A0J9YYF1 115 aa5.19□□□□□ -1.58
GPNMB-209ENST00000474157 PDE6GP18545 87 aa5.19□□□□□ -1.58
GPNMB-209ENST00000474157 KIAA0087Q14695 138 aa5.19□□□□□ -1.58
GPNMB-209ENST00000474157 Q6ZTC4 211 aa5.19□□□□□ -1.58
GPNMB-209ENST00000474157 CCL17Q92583 94 aa5.19□□□□□ -1.58
GPNMB-209ENST00000474157 RMI2Q96E14 147 aa5.19□□□□□ -1.58
GPNMB-209ENST00000474157 LIMD2Q9BT23 127 aa5.19□□□□□ -1.58
GPNMB-209ENST00000474157 A8MUN3 132 aa5.18□□□□□ -1.58
GPNMB-209ENST00000474157 H3BRN7 92 aa5.18□□□□□ -1.58
GPNMB-209ENST00000474157 SPANXN1Q5VSR9 72 aa5.18□□□□□ -1.58
GPNMB-209ENST00000474157 Q8N6K4 173 aa5.18□□□□□ -1.58
GPNMB-209ENST00000474157 BPESC1Q9GZL8 116 aa5.18□□□□□ -1.58
GPNMB-209ENST00000474157 AKAP6Q13023 2319 aa5.18□□□□□ -1.58
GPNMB-209ENST00000474157 ZNF407Q9C0G0 2248 aa5.17□□□□□ -1.58
GPNMB-209ENST00000474157 IGLV3-12A0A075B6K2 115 aa5.17□□□□□ -1.58
GPNMB-209ENST00000474157 IGHV1-18A0A0C4DH31 117 aa5.17□□□□□ -1.58
GPNMB-209ENST00000474157 S100A4P26447 101 aaKnown RBP5.17□□□□□ -1.58
GPNMB-209ENST00000474157 SOSTDC1Q6X4U4 206 aa5.17□□□□□ -1.58
GPNMB-209ENST00000474157 TMEM254Q8TBM7 123 aa5.17□□□□□ -1.58
GPNMB-209ENST00000474157 LENEPQ9Y5L5 61 aa5.17□□□□□ -1.58
GPNMB-209ENST00000474157 DNAJC13O75165 2243 aa5.17□□□□□ -1.58
GPNMB-209ENST00000474157 TRBV6-5A0A0K0K1A5 114 aa5.16□□□□□ -1.58
GPNMB-209ENST00000474157 SEC61BP60468 96 aaKnown RBP5.16□□□□□ -1.58
GPNMB-209ENST00000474157 SYCNQ0VAF6 134 aa5.16□□□□□ -1.58
GPNMB-209ENST00000474157 ENHOQ6UWT2 76 aa5.16□□□□□ -1.58
GPNMB-209ENST00000474157 CLEC19AQ6UXS0 136 aa5.16□□□□□ -1.58
GPNMB-209ENST00000474157 LINC00269Q8N2A0 174 aa5.16□□□□□ -1.58
GPNMB-209ENST00000474157 NDUFA12Q9UI09 145 aa5.16□□□□□ -1.58
GPNMB-209ENST00000474157 A6NN06 94 aa5.15□□□□□ -1.59
GPNMB-209ENST00000474157 GAS8-AS1O95177 125 aa5.15□□□□□ -1.59
GPNMB-209ENST00000474157 TSHBP01222 138 aa5.15□□□□□ -1.59
GPNMB-209ENST00000474157 SAA1P0DJI8 122 aaPredicted RBP5.15□□□□□ -1.59
GPNMB-209ENST00000474157 IGHV3-30-3P0DP02 117 aa5.15□□□□□ -1.59
GPNMB-209ENST00000474157 IGHV4-30-4P0DP06 118 aa5.15□□□□□ -1.59
GPNMB-209ENST00000474157 POLR2KP53803 58 aaKnown RBP5.15□□□□□ -1.59
GPNMB-209ENST00000474157 LINC00574Q9H8X3 128 aa5.15□□□□□ -1.59
GPNMB-209ENST00000474157 TLN2Q9Y4G6 2542 aa5.14□□□□□ -1.59
GPNMB-209ENST00000474157 IGLV5-52A0A0A0MRZ9 124 aa5.14□□□□□ -1.59
GPNMB-209ENST00000474157 TRAV22A0A0B4J277 110 aa5.14□□□□□ -1.59
GPNMB-209ENST00000474157 IGKV2-30P06310 120 aa5.14□□□□□ -1.59
GPNMB-209ENST00000474157 KRTAP24-1Q3LI83 254 aa5.14□□□□□ -1.59
GPNMB-209ENST00000474157 FAM229BQ4G0N7 80 aa5.14□□□□□ -1.59
GPNMB-209ENST00000474157 Q6ZRP5 223 aa5.14□□□□□ -1.59
GPNMB-209ENST00000474157 ORMDL1Q9P0S3 153 aa5.14□□□□□ -1.59
GPNMB-209ENST00000474157 SNURFQ9Y675 71 aa5.14□□□□□ -1.59
GPNMB-209ENST00000474157 TRBV6-8A0A0A6YYG3 113 aa5.13□□□□□ -1.59
GPNMB-209ENST00000474157 TRAV12-3A0A0B4J271 114 aa5.13□□□□□ -1.59
GPNMB-209ENST00000474157 NDUFA1O15239 70 aa5.13□□□□□ -1.59
GPNMB-209ENST00000474157 ZNHIT1O43257 154 aa5.13□□□□□ -1.59
GPNMB-209ENST00000474157 PATE4P0C8F1 98 aa5.13□□□□□ -1.59
GPNMB-209ENST00000474157 CGB3P0DN86 165 aa5.13□□□□□ -1.59
GPNMB-209ENST00000474157 CGB7P0DN87 165 aa5.13□□□□□ -1.59
GPNMB-209ENST00000474157 MP68P56378 58 aa5.13□□□□□ -1.59
GPNMB-209ENST00000474157 LINC00205P59089 165 aa5.13□□□□□ -1.59
GPNMB-209ENST00000474157 C15orf32Q32M92 178 aa5.13□□□□□ -1.59
GPNMB-209ENST00000474157 C9orf47Q6ZRZ4 202 aa5.13□□□□□ -1.59
GPNMB-209ENST00000474157 LINC00308Q8TCZ7 52 aa5.13□□□□□ -1.59
GPNMB-209ENST00000474157 KRTAP4-2Q9BYR5 136 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms