RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 SEC11CQ9BY50 192 aa7.38□□□□□ -1.23
CPNE1-222ENST00000473373 IGLV4-69A0A075B6H9 119 aa7.37□□□□□ -1.23
CPNE1-222ENST00000473373 A0A087WYN8 130 aa7.37□□□□□ -1.23
CPNE1-222ENST00000473373 PANO1I0J062 215 aa7.37□□□□□ -1.23
CPNE1-222ENST00000473373 ADCYAP1P18509 176 aa7.37□□□□□ -1.23
CPNE1-222ENST00000473373 ORMDL2Q53FV1 153 aa7.37□□□□□ -1.23
CPNE1-222ENST00000473373 IMMP2LQ96T52 175 aa7.37□□□□□ -1.23
CPNE1-222ENST00000473373 OPRPNQ99935 248 aaPredicted RBP7.37□□□□□ -1.23
CPNE1-222ENST00000473373 CYSLTR1Q9Y271 337 aa7.37□□□□□ -1.23
CPNE1-222ENST00000473373 MRPS36P82909 103 aaKnown RBP7.36□□□□□ -1.23
CPNE1-222ENST00000473373 SPAG11BQ08648 103 aa7.36□□□□□ -1.23
CPNE1-222ENST00000473373 TEX43Q6ZNM6 134 aa7.36□□□□□ -1.23
CPNE1-222ENST00000473373 STPG4Q8N801 248 aa7.36□□□□□ -1.23
CPNE1-222ENST00000473373 Q8N8P6 123 aa7.36□□□□□ -1.23
CPNE1-222ENST00000473373 SPACA4Q8TDM5 124 aa7.36□□□□□ -1.23
CPNE1-222ENST00000473373 ORAOV1Q8WV07 137 aa7.36□□□□□ -1.23
CPNE1-222ENST00000473373 TMEM141Q96I45 108 aa7.36□□□□□ -1.23
CPNE1-222ENST00000473373 NXT2Q9NPJ8 142 aaKnown RBP7.36□□□□□ -1.23
CPNE1-222ENST00000473373 LINC00474Q9P2X8 69 aa7.36□□□□□ -1.23
CPNE1-222ENST00000473373 TRAV9-1A0A075B6T8 112 aa7.35□□□□□ -1.23
CPNE1-222ENST00000473373 G0S2P27469 103 aa7.35□□□□□ -1.23
CPNE1-222ENST00000473373 RPL18AQ02543 176 aaKnown RBP7.35□□□□□ -1.23
CPNE1-222ENST00000473373 GAGE2BQ13066 116 aa7.35□□□□□ -1.23
CPNE1-222ENST00000473373 KIAA1644Q3SXP7 199 aa7.35□□□□□ -1.23
CPNE1-222ENST00000473373 C2orf66Q6UXQ4 117 aa7.35□□□□□ -1.23
CPNE1-222ENST00000473373 RPS10P5Q9NQ39 176 aa7.35□□□□□ -1.23
CPNE1-222ENST00000473373 HMCN2Q8NDA2 5059 aa7.34□□□□□ -1.23
CPNE1-222ENST00000473373 A0A096LNI7 61 aa7.34□□□□□ -1.23
CPNE1-222ENST00000473373 LOC107984640A0A0U1RRK4 108 aa7.34□□□□□ -1.23
CPNE1-222ENST00000473373 CIRBPQ14011 172 aaKnown RBP7.33□□□□□ -1.24
CPNE1-222ENST00000473373 NDUFA5Q16718 116 aa7.33□□□□□ -1.24
CPNE1-222ENST00000473373 Q6ZRU5 148 aa7.33□□□□□ -1.24
CPNE1-222ENST00000473373 OR10D4PQ8NGN7 298 aa7.33□□□□□ -1.24
CPNE1-222ENST00000473373 VCX2Q9H322 139 aa7.33□□□□□ -1.24
CPNE1-222ENST00000473373 IGLV4-3A0A075B6K6 122 aa7.32□□□□□ -1.24
CPNE1-222ENST00000473373 PRSS47A8MTI9 375 aa7.32□□□□□ -1.24
CPNE1-222ENST00000473373 K7EMI3 77 aa7.32□□□□□ -1.24
CPNE1-222ENST00000473373 NDUFA1O15239 70 aa7.32□□□□□ -1.24
CPNE1-222ENST00000473373 RHEBQ15382 184 aa7.32□□□□□ -1.24
CPNE1-222ENST00000473373 COX19Q49B96 90 aa7.32□□□□□ -1.24
CPNE1-222ENST00000473373 PAPPA-AS1Q5QFB9 102 aa7.32□□□□□ -1.24
CPNE1-222ENST00000473373 C2orf48Q96LS8 159 aa7.32□□□□□ -1.24
CPNE1-222ENST00000473373 SMCO4Q9NRQ5 59 aa7.32□□□□□ -1.24
CPNE1-222ENST00000473373 PYGO1Q9Y3Y4 419 aa7.32□□□□□ -1.24
CPNE1-222ENST00000473373 PRSS2P07478 247 aa7.31□□□□□ -1.24
CPNE1-222ENST00000473373 FABP9Q0Z7S8 132 aa7.31□□□□□ -1.24
CPNE1-222ENST00000473373 PLAC8Q9NZF1 115 aa7.31□□□□□ -1.24
CPNE1-222ENST00000473373 MT-ND6P03923 174 aa7.3□□□□□ -1.24
CPNE1-222ENST00000473373 LORP23490 312 aaPredicted RBP7.3□□□□□ -1.24
CPNE1-222ENST00000473373 FA2HQ7L5A8 372 aa7.3□□□□□ -1.24
CPNE1-222ENST00000473373 PACRGQ96M98 296 aaPredicted RBP7.3□□□□□ -1.24
CPNE1-222ENST00000473373 GNB1LQ9BYB4 327 aa7.3□□□□□ -1.24
CPNE1-222ENST00000473373 GEMIN7Q9H840 131 aaKnown RBP7.3□□□□□ -1.24
CPNE1-222ENST00000473373 TOMM7Q9P0U1 55 aa7.3□□□□□ -1.24
CPNE1-222ENST00000473373 IGHV3OR16-9A0A0B4J2B5 98 aa7.29□□□□□ -1.24
CPNE1-222ENST00000473373 A0A0J9YXV3 536 aa7.29□□□□□ -1.24
CPNE1-222ENST00000473373 KRTAP29-1A8MX34 341 aaPredicted RBP7.29□□□□□ -1.24
CPNE1-222ENST00000473373 APOC3P02656 99 aa7.29□□□□□ -1.24
CPNE1-222ENST00000473373 PTTG1IPP53801 180 aa7.29□□□□□ -1.24
CPNE1-222ENST00000473373 ZC2HC1BQ5TFG8 222 aa7.29□□□□□ -1.24
CPNE1-222ENST00000473373 SCGB3A1Q96QR1 104 aa7.29□□□□□ -1.24
CPNE1-222ENST00000473373 MRPL18Q9H0U6 180 aaKnown RBP7.29□□□□□ -1.24
CPNE1-222ENST00000473373 F8WDY8 70 aa7.28□□□□□ -1.24
CPNE1-222ENST00000473373 UBE2D1P51668 147 aa7.28□□□□□ -1.24
CPNE1-222ENST00000473373 SEC11AP67812 179 aa7.28□□□□□ -1.24
CPNE1-222ENST00000473373 LINC00242Q5T6M2 205 aa7.28□□□□□ -1.24
CPNE1-222ENST00000473373 CARHSP1Q9Y2V2 147 aaKnown RBP7.28□□□□□ -1.24
CPNE1-222ENST00000473373 A0A087WZ39 114 aa7.27□□□□□ -1.25
CPNE1-222ENST00000473373 SNAPINO95295 136 aa7.27□□□□□ -1.25
CPNE1-222ENST00000473373 CKS1BP61024 79 aa7.27□□□□□ -1.25
CPNE1-222ENST00000473373 SERTAD4-AS1Q5TG53 156 aa7.27□□□□□ -1.25
CPNE1-222ENST00000473373 FAM104AQ969W3 186 aa7.27□□□□□ -1.25
CPNE1-222ENST00000473373 TRAPPC1Q9Y5R8 145 aa7.27□□□□□ -1.25
CPNE1-222ENST00000473373 DNAH8Q96JB1 4490 aa7.27□□□□□ -1.25
CPNE1-222ENST00000473373 LINC01549A6NIU2 74 aa7.26□□□□□ -1.25
CPNE1-222ENST00000473373 OXTP01178 125 aa7.26□□□□□ -1.25
CPNE1-222ENST00000473373 NPSP0C0P6 89 aa7.26□□□□□ -1.25
CPNE1-222ENST00000473373 KRTAP10-4P60372 401 aaPredicted RBP7.26□□□□□ -1.25
CPNE1-222ENST00000473373 HERVK_113P63121 156 aa7.26□□□□□ -1.25
CPNE1-222ENST00000473373 GAGE2EQ4V326 116 aa7.26□□□□□ -1.25
CPNE1-222ENST00000473373 SVBPQ8N300 66 aa7.26□□□□□ -1.25
CPNE1-222ENST00000473373 TOMM6Q96B49 74 aa7.26□□□□□ -1.25
CPNE1-222ENST00000473373 MRPL35Q9NZE8 188 aaKnown RBP7.26□□□□□ -1.25
CPNE1-222ENST00000473373 GAGE2DQ9UEU5 116 aa7.26□□□□□ -1.25
CPNE1-222ENST00000473373 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.25□□□□□ -1.25
CPNE1-222ENST00000473373 RNF151Q2KHN1 245 aa7.25□□□□□ -1.25
CPNE1-222ENST00000473373 C6orf226Q5I0X4 101 aa7.25□□□□□ -1.25
CPNE1-222ENST00000473373 C10orf91Q5T1B1 145 aa7.25□□□□□ -1.25
CPNE1-222ENST00000473373 UNQ6190/PRO20217Q6UXQ8 127 aa7.25□□□□□ -1.25
CPNE1-222ENST00000473373 ERASQ7Z444 233 aa7.25□□□□□ -1.25
CPNE1-222ENST00000473373 AMELXQ99217 191 aa7.25□□□□□ -1.25
CPNE1-222ENST00000473373 TIMM17AQ99595 171 aa7.25□□□□□ -1.25
CPNE1-222ENST00000473373 ALKBH7Q9BT30 221 aaPredicted RBP7.25□□□□□ -1.25
CPNE1-222ENST00000473373 IGIPA6NJ69 53 aa7.24□□□□□ -1.25
CPNE1-222ENST00000473373 HNRNPA3P51991 378 aaKnown RBP7.24□□□□□ -1.25
CPNE1-222ENST00000473373 NDUFA6P56556 154 aa7.24□□□□□ -1.25
CPNE1-222ENST00000473373 C9orf116Q5BN46 136 aaPredicted RBP7.24□□□□□ -1.25
CPNE1-222ENST00000473373 LINC00173Q6ZV60 143 aa7.24□□□□□ -1.25
CPNE1-222ENST00000473373 LINC00469Q8N7U9 141 aa7.24□□□□□ -1.25
CPNE1-222ENST00000473373 PRR3P79522 188 aaKnown RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms