RNA–Protein interactions for RNA: ENST00000473252.5

C9orf85-204, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 5

Gene C9orf85, Length 678 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-204ENST00000473252 COX19Q49B96 90 aa8.08□□□□□ -1.12
C9orf85-204ENST00000473252 DPH3Q96FX2 82 aa8.08□□□□□ -1.12
C9orf85-204ENST00000473252 NXT2Q9NPJ8 142 aaKnown RBP8.08□□□□□ -1.12
C9orf85-204ENST00000473252 LINC00474Q9P2X8 69 aa8.08□□□□□ -1.12
C9orf85-204ENST00000473252 F8WDY8 70 aa8.07□□□□□ -1.12
C9orf85-204ENST00000473252 PANO1I0J062 215 aa8.07□□□□□ -1.12
C9orf85-204ENST00000473252 S100PP25815 95 aa8.07□□□□□ -1.12
C9orf85-204ENST00000473252 KRTAP10-4P60372 401 aaPredicted RBP8.07□□□□□ -1.12
C9orf85-204ENST00000473252 ORMDL2Q53FV1 153 aa8.07□□□□□ -1.12
C9orf85-204ENST00000473252 RNASE13Q5GAN3 156 aaKnown RBP8.07□□□□□ -1.12
C9orf85-204ENST00000473252 C10orf91Q5T1B1 145 aa8.07□□□□□ -1.12
C9orf85-204ENST00000473252 COMMD7Q86VX2 200 aa8.07□□□□□ -1.12
C9orf85-204ENST00000473252 FAM104AQ969W3 186 aa8.07□□□□□ -1.12
C9orf85-204ENST00000473252 C2orf48Q96LS8 159 aa8.07□□□□□ -1.12
C9orf85-204ENST00000473252 CARD19Q96LW7 228 aa8.07□□□□□ -1.12
C9orf85-204ENST00000473252 A0A087WYN8 130 aa8.06□□□□□ -1.12
C9orf85-204ENST00000473252 LOC389332A0A1B0GUA5 103 aa8.06□□□□□ -1.12
C9orf85-204ENST00000473252 RPL37AP61513 92 aaKnown RBP8.06□□□□□ -1.12
C9orf85-204ENST00000473252 SYCNQ0VAF6 134 aa8.06□□□□□ -1.12
C9orf85-204ENST00000473252 PLAC8Q9NZF1 115 aa8.06□□□□□ -1.12
C9orf85-204ENST00000473252 IGLV4-69A0A075B6H9 119 aa8.05□□□□□ -1.12
C9orf85-204ENST00000473252 IGHV3OR16-9A0A0B4J2B5 98 aa8.05□□□□□ -1.12
C9orf85-204ENST00000473252 OR10D4PQ8NGN7 298 aa8.05□□□□□ -1.12
C9orf85-204ENST00000473252 PRSS3P2Q8NHM4 247 aa8.05□□□□□ -1.12
C9orf85-204ENST00000473252 TMEM141Q96I45 108 aa8.05□□□□□ -1.12
C9orf85-204ENST00000473252 GNB1LQ9BYB4 327 aa8.05□□□□□ -1.12
C9orf85-204ENST00000473252 CYSLTR1Q9Y271 337 aa8.05□□□□□ -1.12
C9orf85-204ENST00000473252 CARHSP1Q9Y2V2 147 aaKnown RBP8.05□□□□□ -1.12
C9orf85-204ENST00000473252 IFITM10A6NMD0 228 aa8.04□□□□□ -1.12
C9orf85-204ENST00000473252 RHEBQ15382 184 aa8.04□□□□□ -1.12
C9orf85-204ENST00000473252 C2orf66Q6UXQ4 117 aa8.04□□□□□ -1.12
C9orf85-204ENST00000473252 C5orf38Q86SI9 138 aa8.04□□□□□ -1.12
C9orf85-204ENST00000473252 IGLV4-3A0A075B6K6 122 aa8.03□□□□□ -1.12
C9orf85-204ENST00000473252 LINC01549A6NIU2 74 aa8.03□□□□□ -1.12
C9orf85-204ENST00000473252 KRTAP29-1A8MX34 341 aaPredicted RBP8.03□□□□□ -1.12
C9orf85-204ENST00000473252 CHTF8P0CG12 524 aa8.03□□□□□ -1.12
C9orf85-204ENST00000473252 RNF151Q2KHN1 245 aa8.03□□□□□ -1.12
C9orf85-204ENST00000473252 Q6ZN92 141 aa8.03□□□□□ -1.12
C9orf85-204ENST00000473252 TEX43Q6ZNM6 134 aa8.03□□□□□ -1.12
C9orf85-204ENST00000473252 CAMK2N2Q96S95 79 aa8.03□□□□□ -1.12
C9orf85-204ENST00000473252 OPRPNQ99935 248 aaPredicted RBP8.03□□□□□ -1.12
C9orf85-204ENST00000473252 C2orf88Q9BSF0 95 aa8.03□□□□□ -1.12
C9orf85-204ENST00000473252 TGIF2-C20orf24A0A0A6YYL0 155 aa8.02□□□□□ -1.13
C9orf85-204ENST00000473252 H3BS24 57 aa8.02□□□□□ -1.13
C9orf85-204ENST00000473252 MT-ND6P03923 174 aa8.02□□□□□ -1.13
C9orf85-204ENST00000473252 MAJINQ3KP22 176 aa8.02□□□□□ -1.13
C9orf85-204ENST00000473252 PAPPA-AS1Q5QFB9 102 aa8.02□□□□□ -1.13
C9orf85-204ENST00000473252 LINC01561Q8N1V8 128 aa8.02□□□□□ -1.13
C9orf85-204ENST00000473252 C7orf33Q8WU49 177 aa8.02□□□□□ -1.13
C9orf85-204ENST00000473252 LINC00526Q96FQ7 95 aa8.02□□□□□ -1.13
C9orf85-204ENST00000473252 A0A087WZ39 114 aa8.01□□□□□ -1.13
C9orf85-204ENST00000473252 A0A096LNI7 61 aa8.01□□□□□ -1.13
C9orf85-204ENST00000473252 IGKV2-24A0A0C4DH68 120 aa8.01□□□□□ -1.13
C9orf85-204ENST00000473252 LOC107984640A0A0U1RRK4 108 aa8.01□□□□□ -1.13
C9orf85-204ENST00000473252 SPAG11BQ08648 103 aa8.01□□□□□ -1.13
C9orf85-204ENST00000473252 Q6ZRU5 148 aa8.01□□□□□ -1.13
C9orf85-204ENST00000473252 STPG4Q8N801 248 aa8.01□□□□□ -1.13
C9orf85-204ENST00000473252 AMELXQ99217 191 aa8.01□□□□□ -1.13
C9orf85-204ENST00000473252 SRRM2Q9UQ35 2752 aaKnown RBP8□□□□□ -1.13
C9orf85-204ENST00000473252 IGIPA6NJ69 53 aa8□□□□□ -1.13
C9orf85-204ENST00000473252 OXTP01178 125 aa8□□□□□ -1.13
C9orf85-204ENST00000473252 UBE2D1P51668 147 aa8□□□□□ -1.13
C9orf85-204ENST00000473252 SEC11AP67812 179 aa8□□□□□ -1.13
C9orf85-204ENST00000473252 LINC00242Q5T6M2 205 aa8□□□□□ -1.13
C9orf85-204ENST00000473252 FAM19A3Q7Z5A8 133 aa8□□□□□ -1.13
C9orf85-204ENST00000473252 TIMM17AQ99595 171 aa8□□□□□ -1.13
C9orf85-204ENST00000473252 VCX2Q9H322 139 aa8□□□□□ -1.13
C9orf85-204ENST00000473252 RPS10P5Q9NQ39 176 aa8□□□□□ -1.13
C9orf85-204ENST00000473252 MRPL35Q9NZE8 188 aaKnown RBP8□□□□□ -1.13
C9orf85-204ENST00000473252 PTTG1IPP53801 180 aa7.99□□□□□ -1.13
C9orf85-204ENST00000473252 KIAA1644Q3SXP7 199 aa7.99□□□□□ -1.13
C9orf85-204ENST00000473252 ORAOV1Q8WV07 137 aa7.99□□□□□ -1.13
C9orf85-204ENST00000473252 TOMM6Q96B49 74 aa7.99□□□□□ -1.13
C9orf85-204ENST00000473252 FLG2Q5D862 2391 aaPredicted RBP7.98□□□□□ -1.13
C9orf85-204ENST00000473252 LINC01546A6NGU7 62 aa7.98□□□□□ -1.13
C9orf85-204ENST00000473252 NDUFA1O15239 70 aa7.98□□□□□ -1.13
C9orf85-204ENST00000473252 NDUFA5Q16718 116 aa7.98□□□□□ -1.13
C9orf85-204ENST00000473252 ALKBH7Q9BT30 221 aaPredicted RBP7.98□□□□□ -1.13
C9orf85-204ENST00000473252 SNAPINO95295 136 aa7.97□□□□□ -1.13
C9orf85-204ENST00000473252 TLX1NBP0CAT3 122 aa7.97□□□□□ -1.13
C9orf85-204ENST00000473252 LINC00173Q6ZV60 143 aa7.97□□□□□ -1.13
C9orf85-204ENST00000473252 ERASQ7Z444 233 aa7.97□□□□□ -1.13
C9orf85-204ENST00000473252 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.96□□□□□ -1.14
C9orf85-204ENST00000473252 LCE3BQ5TA77 95 aa7.96□□□□□ -1.14
C9orf85-204ENST00000473252 SVBPQ8N300 66 aa7.96□□□□□ -1.14
C9orf85-204ENST00000473252 MYCBP2O75592 4640 aa7.95□□□□□ -1.14
C9orf85-204ENST00000473252 HERVK_113P63121 156 aa7.95□□□□□ -1.14
C9orf85-204ENST00000473252 FABP9Q0Z7S8 132 aa7.95□□□□□ -1.14
C9orf85-204ENST00000473252 GAGE2BQ13066 116 aa7.95□□□□□ -1.14
C9orf85-204ENST00000473252 KIAA0087Q14695 138 aa7.95□□□□□ -1.14
C9orf85-204ENST00000473252 ANKRD39Q53RE8 183 aa7.95□□□□□ -1.14
C9orf85-204ENST00000473252 TRBV30A0A0K0K1B3 111 aa7.94□□□□□ -1.14
C9orf85-204ENST00000473252 APOC3P02656 99 aa7.94□□□□□ -1.14
C9orf85-204ENST00000473252 SCGB3A1Q96QR1 104 aa7.94□□□□□ -1.14
C9orf85-204ENST00000473252 SMCO4Q9NRQ5 59 aa7.94□□□□□ -1.14
C9orf85-204ENST00000473252 HNRNPA3P51991 378 aaKnown RBP7.93□□□□□ -1.14
C9orf85-204ENST00000473252 RPL18AQ02543 176 aaKnown RBP7.93□□□□□ -1.14
C9orf85-204ENST00000473252 FA2HQ7L5A8 372 aa7.93□□□□□ -1.14
C9orf85-204ENST00000473252 TRAPPC1Q9Y5R8 145 aa7.93□□□□□ -1.14
C9orf85-204ENST00000473252 UNQ6190/PRO20217Q6UXQ8 127 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms