RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 F8W036 122 aa9.51□□□□□ -0.89
VTI1A-203ENST00000472892 S100A8P05109 93 aa9.51□□□□□ -0.89
VTI1A-203ENST00000472892 C5orf38Q86SI9 138 aa9.51□□□□□ -0.89
VTI1A-203ENST00000472892 D6R8Y8 96 aa9.5□□□□□ -0.89
VTI1A-203ENST00000472892 APOMO95445 188 aa9.5□□□□□ -0.89
VTI1A-203ENST00000472892 RPL39P62891 51 aaKnown RBP9.5□□□□□ -0.89
VTI1A-203ENST00000472892 HBBP68871 147 aa9.5□□□□□ -0.89
VTI1A-203ENST00000472892 GAGE2BQ13066 116 aa9.5□□□□□ -0.89
VTI1A-203ENST00000472892 MRPL54Q6P161 138 aaKnown RBP9.5□□□□□ -0.89
VTI1A-203ENST00000472892 SPINK6Q6UWN8 80 aa9.5□□□□□ -0.89
VTI1A-203ENST00000472892 CAMK2N2Q96S95 79 aa9.5□□□□□ -0.89
VTI1A-203ENST00000472892 SMIM2Q9BVW6 85 aa9.5□□□□□ -0.89
VTI1A-203ENST00000472892 PPBPP02775 128 aa9.49□□□□□ -0.89
VTI1A-203ENST00000472892 SRSF9Q13242 221 aaKnown RBP eCLIP9.49□□□□□ -0.89
VTI1A-203ENST00000472892 Q6ZRP5 223 aa9.49□□□□□ -0.89
VTI1A-203ENST00000472892 SPANXA1Q9NS26 97 aa9.49□□□□□ -0.89
VTI1A-203ENST00000472892 A0A1W2PNN7 141 aa9.48□□□□□ -0.89
VTI1A-203ENST00000472892 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.48□□□□□ -0.89
VTI1A-203ENST00000472892 NPYP01303 97 aa9.48□□□□□ -0.89
VTI1A-203ENST00000472892 MRPS36P82909 103 aaKnown RBP9.48□□□□□ -0.89
VTI1A-203ENST00000472892 RNF151Q2KHN1 245 aa9.48□□□□□ -0.89
VTI1A-203ENST00000472892 IGHV3OR16-9A0A0B4J2B5 98 aa9.47□□□□□ -0.89
VTI1A-203ENST00000472892 OR10D4PQ8NGN7 298 aa9.47□□□□□ -0.89
VTI1A-203ENST00000472892 OPRPNQ99935 248 aaPredicted RBP9.47□□□□□ -0.89
VTI1A-203ENST00000472892 SPAG11BQ08648 103 aa9.46□□□□□ -0.9
VTI1A-203ENST00000472892 ATP5L2Q7Z4Y8 100 aa9.46□□□□□ -0.9
VTI1A-203ENST00000472892 A0A0J9YXV3 536 aa9.45□□□□□ -0.9
VTI1A-203ENST00000472892 F8WDY8 70 aa9.45□□□□□ -0.9
VTI1A-203ENST00000472892 KRTAP10-8P60410 259 aa9.45□□□□□ -0.9
VTI1A-203ENST00000472892 REG3GQ6UW15 175 aa9.45□□□□□ -0.9
VTI1A-203ENST00000472892 TMEM136Q6ZRR5 245 aa9.45□□□□□ -0.9
VTI1A-203ENST00000472892 ORMDL3Q8N138 153 aa9.45□□□□□ -0.9
VTI1A-203ENST00000472892 PRSS47A8MTI9 375 aa9.44□□□□□ -0.9
VTI1A-203ENST00000472892 C9orf116Q5BN46 136 aaPredicted RBP9.44□□□□□ -0.9
VTI1A-203ENST00000472892 ORAOV1Q8WV07 137 aa9.44□□□□□ -0.9
VTI1A-203ENST00000472892 MRPL35Q9NZE8 188 aaKnown RBP9.44□□□□□ -0.9
VTI1A-203ENST00000472892 IFITM10A6NMD0 228 aa9.43□□□□□ -0.9
VTI1A-203ENST00000472892 RAB5AP20339 215 aa9.43□□□□□ -0.9
VTI1A-203ENST00000472892 RPL18AQ02543 176 aaKnown RBP9.43□□□□□ -0.9
VTI1A-203ENST00000472892 PRELID3AQ96N28 172 aa9.43□□□□□ -0.9
VTI1A-203ENST00000472892 PYGO1Q9Y3Y4 419 aa9.43□□□□□ -0.9
VTI1A-203ENST00000472892 NDUFA1O15239 70 aa9.41□□□□□ -0.9
VTI1A-203ENST00000472892 IFI27P40305 119 aaPredicted RBP9.41□□□□□ -0.9
VTI1A-203ENST00000472892 C10orf25Q5T742 122 aa9.41□□□□□ -0.9
VTI1A-203ENST00000472892 IMMP2LQ96T52 175 aa9.41□□□□□ -0.9
VTI1A-203ENST00000472892 KRTAP4-8Q9BYQ9 185 aa9.41□□□□□ -0.9
VTI1A-203ENST00000472892 PSORS1C2Q9UIG4 136 aa9.41□□□□□ -0.9
VTI1A-203ENST00000472892 A0A087WZ39 114 aa9.4□□□□□ -0.9
VTI1A-203ENST00000472892 TLX1NBP0CAT3 122 aa9.4□□□□□ -0.9
VTI1A-203ENST00000472892 LINC00242Q5T6M2 205 aa9.4□□□□□ -0.9
VTI1A-203ENST00000472892 LAMTOR2Q9Y2Q5 125 aa9.4□□□□□ -0.9
VTI1A-203ENST00000472892 IGLV4-3A0A075B6K6 122 aa9.39□□□□□ -0.91
VTI1A-203ENST00000472892 PNRC1Q12796 327 aaPredicted RBP9.39□□□□□ -0.91
VTI1A-203ENST00000472892 KIAA0087Q14695 138 aa9.39□□□□□ -0.91
VTI1A-203ENST00000472892 ODF1Q14990 250 aa9.39□□□□□ -0.91
VTI1A-203ENST00000472892 UNQ6190/PRO20217Q6UXQ8 127 aa9.39□□□□□ -0.91
VTI1A-203ENST00000472892 PHF5AQ7RTV0 110 aaKnown RBP9.39□□□□□ -0.91
VTI1A-203ENST00000472892 C6orf48Q9UBA6 75 aa9.39□□□□□ -0.91
VTI1A-203ENST00000472892 TGIF2-C20orf24A0A0A6YYL0 155 aa9.38□□□□□ -0.91
VTI1A-203ENST00000472892 LOC389332A0A1B0GUA5 103 aa9.38□□□□□ -0.91
VTI1A-203ENST00000472892 MT-ND6P03923 174 aa9.38□□□□□ -0.91
VTI1A-203ENST00000472892 ANAPC16Q96DE5 110 aa9.38□□□□□ -0.91
VTI1A-203ENST00000472892 TMEM141Q96I45 108 aa9.38□□□□□ -0.91
VTI1A-203ENST00000472892 LRP2P98164 4655 aa9.38□□□□□ -0.91
VTI1A-203ENST00000472892 MT-ND4LP03901 98 aa9.37□□□□□ -0.91
VTI1A-203ENST00000472892 Q8N8P6 123 aa9.37□□□□□ -0.91
VTI1A-203ENST00000472892 MAP1LC3AQ9H492 121 aa9.37□□□□□ -0.91
VTI1A-203ENST00000472892 C1orf137Q5JT78 98 aa9.36□□□□□ -0.91
VTI1A-203ENST00000472892 TEX43Q6ZNM6 134 aa9.36□□□□□ -0.91
VTI1A-203ENST00000472892 FAM168BA1KXE4 195 aa9.35□□□□□ -0.91
VTI1A-203ENST00000472892 UBE2D1P51668 147 aa9.35□□□□□ -0.91
VTI1A-203ENST00000472892 LINC01561Q8N1V8 128 aa9.35□□□□□ -0.91
VTI1A-203ENST00000472892 TRBV30A0A0K0K1B3 111 aa9.34□□□□□ -0.91
VTI1A-203ENST00000472892 RAB14P61106 215 aa9.34□□□□□ -0.91
VTI1A-203ENST00000472892 C2orf66Q6UXQ4 117 aa9.34□□□□□ -0.91
VTI1A-203ENST00000472892 AMELXQ99217 191 aa9.34□□□□□ -0.91
VTI1A-203ENST00000472892 CYSLTR1Q9Y271 337 aa9.34□□□□□ -0.91
VTI1A-203ENST00000472892 K7EMI3 77 aa9.33□□□□□ -0.92
VTI1A-203ENST00000472892 NPSP0C0P6 89 aa9.33□□□□□ -0.92
VTI1A-203ENST00000472892 GAGE2EQ4V326 116 aa9.33□□□□□ -0.92
VTI1A-203ENST00000472892 ORMDL2Q53FV1 153 aa9.33□□□□□ -0.92
VTI1A-203ENST00000472892 LINC00173Q6ZV60 143 aa9.33□□□□□ -0.92
VTI1A-203ENST00000472892 KRTAP11-1Q8IUC1 163 aa9.33□□□□□ -0.92
VTI1A-203ENST00000472892 KRTAP7-1Q8IUC3 87 aa9.33□□□□□ -0.92
VTI1A-203ENST00000472892 C2orf88Q9BSF0 95 aa9.33□□□□□ -0.92
VTI1A-203ENST00000472892 VCX2Q9H322 139 aa9.33□□□□□ -0.92
VTI1A-203ENST00000472892 GAGE2DQ9UEU5 116 aa9.33□□□□□ -0.92
VTI1A-203ENST00000472892 IGIPA6NJ69 53 aa9.32□□□□□ -0.92
VTI1A-203ENST00000472892 IGLV7-43P04211 117 aa9.32□□□□□ -0.92
VTI1A-203ENST00000472892 ZC2HC1BQ5TFG8 222 aa9.32□□□□□ -0.92
VTI1A-203ENST00000472892 C2orf82Q6UX34 121 aa9.32□□□□□ -0.92
VTI1A-203ENST00000472892 Q6ZN92 141 aa9.31□□□□□ -0.92
VTI1A-203ENST00000472892 FAM19A5Q7Z5A7 132 aaPredicted RBP9.31□□□□□ -0.92
VTI1A-203ENST00000472892 FAM19A3Q7Z5A8 133 aa9.31□□□□□ -0.92
VTI1A-203ENST00000472892 NDUFC2-KCTD14E9PQ53 114 aa9.3□□□□□ -0.92
VTI1A-203ENST00000472892 DIRC1Q969H9 104 aa9.3□□□□□ -0.92
VTI1A-203ENST00000472892 PACRGQ96M98 296 aaPredicted RBP9.3□□□□□ -0.92
VTI1A-203ENST00000472892 NXT2Q9NPJ8 142 aaKnown RBP9.3□□□□□ -0.92
VTI1A-203ENST00000472892 RNF213Q63HN8 5207 aa9.29□□□□□ -0.92
VTI1A-203ENST00000472892 C9orf129Q5T035 196 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms