RNA–Protein interactions for RNA: ENST00000472648.1

SIK3-208, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 267 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-208ENST00000472648 D6R8Y8 96 aa3.43□□□□□ -1.86
SIK3-208ENST00000472648 SMKR1H3BMG3 65 aa3.43□□□□□ -1.86
SIK3-208ENST00000472648 I3L3M4 83 aa3.43□□□□□ -1.86
SIK3-208ENST00000472648 M0QY20 66 aa3.43□□□□□ -1.86
SIK3-208ENST00000472648 NCR2O95944 276 aa3.43□□□□□ -1.86
SIK3-208ENST00000472648 RAB5AP20339 215 aa3.43□□□□□ -1.86
SIK3-208ENST00000472648 COTL1Q14019 142 aa3.43□□□□□ -1.86
SIK3-208ENST00000472648 ASB16-AS1Q495Z4 193 aa3.43□□□□□ -1.86
SIK3-208ENST00000472648 MRPL51Q4U2R6 128 aaKnown RBP3.43□□□□□ -1.86
SIK3-208ENST00000472648 GATD1Q8NB37 220 aa3.43□□□□□ -1.86
SIK3-208ENST00000472648 NEXN-AS1Q8NBZ9 246 aa3.43□□□□□ -1.86
SIK3-208ENST00000472648 PRELID3AQ96N28 172 aa3.43□□□□□ -1.86
SIK3-208ENST00000472648 KIR2DL4Q99706 377 aa3.43□□□□□ -1.86
SIK3-208ENST00000472648 GNB1LQ9BYB4 327 aa3.43□□□□□ -1.86
SIK3-208ENST00000472648 MRPL18Q9H0U6 180 aaKnown RBP3.43□□□□□ -1.86
SIK3-208ENST00000472648 IGLV4-60A0A075B6I1 120 aa3.42□□□□□ -1.86
SIK3-208ENST00000472648 IGHV1-24A0A0C4DH33 117 aa3.42□□□□□ -1.86
SIK3-208ENST00000472648 IGKV3OR2-268A0A0C4DH90 116 aa3.42□□□□□ -1.86
SIK3-208ENST00000472648 LOC389332A0A1B0GUA5 103 aa3.42□□□□□ -1.86
SIK3-208ENST00000472648 A0A1B0GXF2 115 aa3.42□□□□□ -1.86
SIK3-208ENST00000472648 SDHAF1A6NFY7 115 aa3.42□□□□□ -1.86
SIK3-208ENST00000472648 VCYO14598 125 aa3.42□□□□□ -1.86
SIK3-208ENST00000472648 TCAPO15273 167 aa3.42□□□□□ -1.86
SIK3-208ENST00000472648 ATP6V1G1O75348 118 aa3.42□□□□□ -1.86
SIK3-208ENST00000472648 LORP23490 312 aaPredicted RBP3.42□□□□□ -1.86
SIK3-208ENST00000472648 SMAGPQ0VAQ4 97 aa3.42□□□□□ -1.86
SIK3-208ENST00000472648 C9orf116Q5BN46 136 aaPredicted RBP3.42□□□□□ -1.86
SIK3-208ENST00000472648 AMMECR1LQ6DCA0 310 aa3.42□□□□□ -1.86
SIK3-208ENST00000472648 LINC00173Q6ZV60 143 aa3.42□□□□□ -1.86
SIK3-208ENST00000472648 CBLN2Q8IUK8 224 aa3.42□□□□□ -1.86
SIK3-208ENST00000472648 TYMSOSQ8TAI1 123 aa3.42□□□□□ -1.86
SIK3-208ENST00000472648 RPL39LQ96EH5 51 aaKnown RBP3.42□□□□□ -1.86
SIK3-208ENST00000472648 MAP1LC3AQ9H492 121 aa3.42□□□□□ -1.86
SIK3-208ENST00000472648 LAMTOR2Q9Y2Q5 125 aa3.42□□□□□ -1.86
SIK3-208ENST00000472648 TRBV24-1A0A075B6N3 115 aa3.41□□□□□ -1.86
SIK3-208ENST00000472648 A0A1B0GUV1 79 aa3.41□□□□□ -1.86
SIK3-208ENST00000472648 TNFRSF6BO95407 300 aa3.41□□□□□ -1.86
SIK3-208ENST00000472648 FGF6P10767 208 aa3.41□□□□□ -1.86
SIK3-208ENST00000472648 KRTAP10-6P60371 365 aaPredicted RBP3.41□□□□□ -1.86
SIK3-208ENST00000472648 SEC61BP60468 96 aaKnown RBP3.41□□□□□ -1.86
SIK3-208ENST00000472648 SUMO2P61956 95 aaKnown RBP3.41□□□□□ -1.86
SIK3-208ENST00000472648 MT1HP80294 61 aa3.41□□□□□ -1.86
SIK3-208ENST00000472648 IQCJQ1A5X6 159 aa3.41□□□□□ -1.86
SIK3-208ENST00000472648 KIAA1644Q3SXP7 199 aa3.41□□□□□ -1.86
SIK3-208ENST00000472648 LINC00337Q8N6G1 96 aa3.41□□□□□ -1.86
SIK3-208ENST00000472648 TMEM18Q96B42 140 aa3.41□□□□□ -1.86
SIK3-208ENST00000472648 LINC00526Q96FQ7 95 aa3.41□□□□□ -1.86
SIK3-208ENST00000472648 TMEM101Q96IK0 257 aa3.41□□□□□ -1.86
SIK3-208ENST00000472648 C20orf78Q9BR46 151 aa3.41□□□□□ -1.86
SIK3-208ENST00000472648 TMEM243Q9BU79 118 aa3.41□□□□□ -1.86
SIK3-208ENST00000472648 KRTAP4-1Q9BYQ7 146 aa3.41□□□□□ -1.86
SIK3-208ENST00000472648 PPDPFQ9H3Y8 114 aa3.41□□□□□ -1.86
SIK3-208ENST00000472648 TRBV6-5A0A0K0K1A5 114 aa3.4□□□□□ -1.87
SIK3-208ENST00000472648 ZNF561-AS1K7EIQ3 104 aa3.4□□□□□ -1.87
SIK3-208ENST00000472648 SCO1O75880 301 aa3.4□□□□□ -1.87
SIK3-208ENST00000472648 G0S2P27469 103 aa3.4□□□□□ -1.87
SIK3-208ENST00000472648 RPL18AQ02543 176 aaKnown RBP3.4□□□□□ -1.87
SIK3-208ENST00000472648 SYCNQ0VAF6 134 aa3.4□□□□□ -1.87
SIK3-208ENST00000472648 LCE2CQ5TA81 110 aa3.4□□□□□ -1.87
SIK3-208ENST00000472648 RNASEKQ6P5S7 137 aaKnown RBP3.4□□□□□ -1.87
SIK3-208ENST00000472648 FA2HQ7L5A8 372 aa3.4□□□□□ -1.87
SIK3-208ENST00000472648 CHCHD10Q8WYQ3 142 aaPredicted RBP3.4□□□□□ -1.87
SIK3-208ENST00000472648 SMIM2Q9BVW6 85 aa3.4□□□□□ -1.87
SIK3-208ENST00000472648 IGHV1-58A0A0C4DH39 117 aa3.39□□□□□ -1.87
SIK3-208ENST00000472648 NPYP01303 97 aa3.39□□□□□ -1.87
SIK3-208ENST00000472648 RAB5BP61020 215 aa3.39□□□□□ -1.87
SIK3-208ENST00000472648 ORMDL2Q53FV1 153 aa3.39□□□□□ -1.87
SIK3-208ENST00000472648 BAGE3Q86Y29 109 aa3.39□□□□□ -1.87
SIK3-208ENST00000472648 Q8N8P6 123 aa3.39□□□□□ -1.87
SIK3-208ENST00000472648 NRACQ8N912 160 aa3.39□□□□□ -1.87
SIK3-208ENST00000472648 NXT2Q9NPJ8 142 aaKnown RBP3.39□□□□□ -1.87
SIK3-208ENST00000472648 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.38□□□□□ -1.87
SIK3-208ENST00000472648 A0A087X002 238 aa3.38□□□□□ -1.87
SIK3-208ENST00000472648 TRBV27A0A0K0K1C4 114 aa3.38□□□□□ -1.87
SIK3-208ENST00000472648 IGKV2-29A2NJV5 120 aaPredicted RBP3.38□□□□□ -1.87
SIK3-208ENST00000472648 H7C423 109 aa3.38□□□□□ -1.87
SIK3-208ENST00000472648 K7EMI3 77 aa3.38□□□□□ -1.87
SIK3-208ENST00000472648 M0R2T5 61 aa3.38□□□□□ -1.87
SIK3-208ENST00000472648 APOMO95445 188 aa3.38□□□□□ -1.87
SIK3-208ENST00000472648 IFI27P40305 119 aaPredicted RBP3.38□□□□□ -1.87
SIK3-208ENST00000472648 POLR2KP53803 58 aaKnown RBP3.38□□□□□ -1.87
SIK3-208ENST00000472648 UBE2BP63146 152 aa3.38□□□□□ -1.87
SIK3-208ENST00000472648 OR5A1Q8NGJ0 315 aa3.38□□□□□ -1.87
SIK3-208ENST00000472648 ALKBH7Q9BT30 221 aaPredicted RBP3.38□□□□□ -1.87
SIK3-208ENST00000472648 SSPOA2VEC9 5147 aa3.37□□□□□ -1.87
SIK3-208ENST00000472648 IGLV4-69A0A075B6H9 119 aa3.37□□□□□ -1.87
SIK3-208ENST00000472648 COLCA2A8K830 154 aa3.37□□□□□ -1.87
SIK3-208ENST00000472648 C1orf196B1AJZ1 125 aa3.37□□□□□ -1.87
SIK3-208ENST00000472648 TSHBP01222 138 aa3.37□□□□□ -1.87
SIK3-208ENST00000472648 TRGC2P03986 189 aa3.37□□□□□ -1.87
SIK3-208ENST00000472648 ZNF25P17030 456 aaPredicted RBP3.37□□□□□ -1.87
SIK3-208ENST00000472648 RPL32P62910 135 aaKnown RBP3.37□□□□□ -1.87
SIK3-208ENST00000472648 FOXI1Q12951 378 aa3.37□□□□□ -1.87
SIK3-208ENST00000472648 Q6ZN92 141 aa3.37□□□□□ -1.87
SIK3-208ENST00000472648 KRTAP11-1Q8IUC1 163 aa3.37□□□□□ -1.87
SIK3-208ENST00000472648 LINC00304Q8N9R0 145 aa3.37□□□□□ -1.87
SIK3-208ENST00000472648 CYSLTR1Q9Y271 337 aa3.37□□□□□ -1.87
SIK3-208ENST00000472648 LINC01549A6NIU2 74 aa3.36□□□□□ -1.87
SIK3-208ENST00000472648 LINC00614P0C842 121 aa3.36□□□□□ -1.87
SIK3-208ENST00000472648 XCL1P47992 114 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms