RNA–Protein interactions for RNA: ENST00000472627.1

SMURF1-203, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene SMURF1, Length 825 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-203ENST00000472627 PACRGQ96M98 296 aaPredicted RBP8.15□□□□□ -1.1
SMURF1-203ENST00000472627 TIMM21Q9BVV7 248 aa8.15□□□□□ -1.1
SMURF1-203ENST00000472627 TRBV20OR9-2A0A075B6H5 130 aa8.14□□□□□ -1.11
SMURF1-203ENST00000472627 ZNF345Q14585 488 aa8.14□□□□□ -1.11
SMURF1-203ENST00000472627 KRTAP7-1Q8IUC3 87 aa8.14□□□□□ -1.11
SMURF1-203ENST00000472627 LINC00304Q8N9R0 145 aa8.14□□□□□ -1.11
SMURF1-203ENST00000472627 CTDSP1Q9GZU7 261 aa8.14□□□□□ -1.11
SMURF1-203ENST00000472627 IGHV3OR16-9A0A0B4J2B5 98 aa8.13□□□□□ -1.11
SMURF1-203ENST00000472627 KANTRA0A1W2PQU2 76 aa8.13□□□□□ -1.11
SMURF1-203ENST00000472627 A8MWL6 223 aa8.13□□□□□ -1.11
SMURF1-203ENST00000472627 CTAG1AP78358 180 aa8.13□□□□□ -1.11
SMURF1-203ENST00000472627 TGIF2-C20orf24A0A0A6YYL0 155 aa8.12□□□□□ -1.11
SMURF1-203ENST00000472627 TMEM191AQ9H0A3 160 aa8.12□□□□□ -1.11
SMURF1-203ENST00000472627 PPP1R2P9O14990 202 aa8.11□□□□□ -1.11
SMURF1-203ENST00000472627 TCAPO15273 167 aa8.11□□□□□ -1.11
SMURF1-203ENST00000472627 GATCO43716 136 aaKnown RBP8.11□□□□□ -1.11
SMURF1-203ENST00000472627 IFITM10A6NMD0 228 aa8.1□□□□□ -1.11
SMURF1-203ENST00000472627 BCE1O60756 84 aa8.1□□□□□ -1.11
SMURF1-203ENST00000472627 SUMO2P61956 95 aaKnown RBP8.1□□□□□ -1.11
SMURF1-203ENST00000472627 HBBP68871 147 aa8.1□□□□□ -1.11
SMURF1-203ENST00000472627 SRSF3P84103 164 aaKnown RBP8.1□□□□□ -1.11
SMURF1-203ENST00000472627 C9orf129Q5T035 196 aaKnown RBP8.1□□□□□ -1.11
SMURF1-203ENST00000472627 TAGLN2P37802 199 aaKnown RBP8.09□□□□□ -1.11
SMURF1-203ENST00000472627 FAM229BQ4G0N7 80 aa8.09□□□□□ -1.11
SMURF1-203ENST00000472627 LINC00337Q8N6G1 96 aa8.09□□□□□ -1.11
SMURF1-203ENST00000472627 PPDPFQ9H3Y8 114 aa8.09□□□□□ -1.11
SMURF1-203ENST00000472627 C22orf24Q9Y442 160 aa8.09□□□□□ -1.11
SMURF1-203ENST00000472627 IGKV2D-26A0A0A0MRZ7 120 aa8.08□□□□□ -1.12
SMURF1-203ENST00000472627 A0A1B0GUT8 65 aa8.08□□□□□ -1.12
SMURF1-203ENST00000472627 RAB4AP20338 218 aa8.08□□□□□ -1.12
SMURF1-203ENST00000472627 SPANXA1Q9NS26 97 aa8.08□□□□□ -1.12
SMURF1-203ENST00000472627 K7EN84 100 aa8.07□□□□□ -1.12
SMURF1-203ENST00000472627 CT83Q5H943 113 aa8.07□□□□□ -1.12
SMURF1-203ENST00000472627 AMN1Q8IY45 258 aa8.07□□□□□ -1.12
SMURF1-203ENST00000472627 OCC1Q8TAD7 63 aa8.07□□□□□ -1.12
SMURF1-203ENST00000472627 PRSS2P07478 247 aa8.06□□□□□ -1.12
SMURF1-203ENST00000472627 MRPL55Q7Z7F7 128 aaKnown RBP8.06□□□□□ -1.12
SMURF1-203ENST00000472627 TP73-AS1Q9UF72 201 aa8.06□□□□□ -1.12
SMURF1-203ENST00000472627 ZNF727A8MUV8 499 aa8.05□□□□□ -1.12
SMURF1-203ENST00000472627 CKS1BP61024 79 aa8.05□□□□□ -1.12
SMURF1-203ENST00000472627 MRPS36P82909 103 aaKnown RBP8.05□□□□□ -1.12
SMURF1-203ENST00000472627 KIAA0087Q14695 138 aa8.05□□□□□ -1.12
SMURF1-203ENST00000472627 C2orf82Q6UX34 121 aa8.05□□□□□ -1.12
SMURF1-203ENST00000472627 FAM231DQ6ZW35 169 aa8.05□□□□□ -1.12
SMURF1-203ENST00000472627 HIGD1CA8MV81 97 aa8.04□□□□□ -1.12
SMURF1-203ENST00000472627 SMKR1H3BMG3 65 aa8.04□□□□□ -1.12
SMURF1-203ENST00000472627 UBE2AP49459 152 aa8.04□□□□□ -1.12
SMURF1-203ENST00000472627 KRTAP13-2Q52LG2 175 aa8.04□□□□□ -1.12
SMURF1-203ENST00000472627 HMSDA8MTL9 139 aa8.03□□□□□ -1.12
SMURF1-203ENST00000472627 SEC61BP60468 96 aaKnown RBP8.03□□□□□ -1.12
SMURF1-203ENST00000472627 RPL39P62891 51 aaKnown RBP8.03□□□□□ -1.12
SMURF1-203ENST00000472627 RIGQ13278 110 aa8.03□□□□□ -1.12
SMURF1-203ENST00000472627 ASB16-AS1Q495Z4 193 aa8.03□□□□□ -1.12
SMURF1-203ENST00000472627 FP248Q71RG6 208 aaPredicted RBP8.03□□□□□ -1.12
SMURF1-203ENST00000472627 NRACQ8N912 160 aa8.03□□□□□ -1.12
SMURF1-203ENST00000472627 C20orf78Q9BR46 151 aa8.03□□□□□ -1.12
SMURF1-203ENST00000472627 ANAPC11Q9NYG5 84 aa8.03□□□□□ -1.12
SMURF1-203ENST00000472627 LINC00242Q5T6M2 205 aa8.02□□□□□ -1.13
SMURF1-203ENST00000472627 LINC00469Q8N7U9 141 aa8.02□□□□□ -1.13
SMURF1-203ENST00000472627 XAGE1AQ9HD64 81 aa8.02□□□□□ -1.13
SMURF1-203ENST00000472627 SMLR1H3BR10 107 aa8.01□□□□□ -1.13
SMURF1-203ENST00000472627 IFI27P40305 119 aaPredicted RBP8.01□□□□□ -1.13
SMURF1-203ENST00000472627 LINC01561Q8N1V8 128 aa8.01□□□□□ -1.13
SMURF1-203ENST00000472627 RPL32P62910 135 aaKnown RBP8□□□□□ -1.13
SMURF1-203ENST00000472627 SPAG11AQ6PDA7 123 aa8□□□□□ -1.13
SMURF1-203ENST00000472627 LINC00862A6NCI5 91 aa7.99□□□□□ -1.13
SMURF1-203ENST00000472627 C6orf226Q5I0X4 101 aa7.99□□□□□ -1.13
SMURF1-203ENST00000472627 TOMM7Q9P0U1 55 aa7.99□□□□□ -1.13
SMURF1-203ENST00000472627 RPL37AP8A6NKH3 93 aa7.98□□□□□ -1.13
SMURF1-203ENST00000472627 C2orf88Q9BSF0 95 aa7.98□□□□□ -1.13
SMURF1-203ENST00000472627 TMEM250H0YL14 139 aa7.97□□□□□ -1.13
SMURF1-203ENST00000472627 CKS2P33552 79 aa7.97□□□□□ -1.13
SMURF1-203ENST00000472627 C4orf48Q5BLP8 95 aa7.97□□□□□ -1.13
SMURF1-203ENST00000472627 Q6ZN92 141 aa7.97□□□□□ -1.13
SMURF1-203ENST00000472627 SMIM2Q9BVW6 85 aa7.97□□□□□ -1.13
SMURF1-203ENST00000472627 TRBV24-1A0A075B6N3 115 aa7.96□□□□□ -1.14
SMURF1-203ENST00000472627 A0A1B0GVG6 124 aa7.96□□□□□ -1.14
SMURF1-203ENST00000472627 CFC1BP0CG36 223 aa7.96□□□□□ -1.14
SMURF1-203ENST00000472627 TEX43Q6ZNM6 134 aa7.96□□□□□ -1.14
SMURF1-203ENST00000472627 Q8IZM0 81 aa7.96□□□□□ -1.14
SMURF1-203ENST00000472627 FAM104AQ969W3 186 aa7.96□□□□□ -1.14
SMURF1-203ENST00000472627 LINC00167Q96N53 147 aa7.96□□□□□ -1.14
SMURF1-203ENST00000472627 ALKBH7Q9BT30 221 aaPredicted RBP7.96□□□□□ -1.14
SMURF1-203ENST00000472627 RAB5AP20339 215 aa7.95□□□□□ -1.14
SMURF1-203ENST00000472627 MRPL51Q4U2R6 128 aaKnown RBP7.95□□□□□ -1.14
SMURF1-203ENST00000472627 FAM104BQ5XKR9 115 aa7.95□□□□□ -1.14
SMURF1-203ENST00000472627 NKAPP1Q8N9T2 125 aa7.95□□□□□ -1.14
SMURF1-203ENST00000472627 TMEM141Q96I45 108 aa7.95□□□□□ -1.14
SMURF1-203ENST00000472627 GAGE10A6NGK3 116 aa7.94□□□□□ -1.14
SMURF1-203ENST00000472627 F8VRH5 84 aa7.94□□□□□ -1.14
SMURF1-203ENST00000472627 TNFRSF6BO95407 300 aa7.94□□□□□ -1.14
SMURF1-203ENST00000472627 CEBPGP53567 150 aa7.94□□□□□ -1.14
SMURF1-203ENST00000472627 KRTAP13-3Q3SY46 172 aa7.94□□□□□ -1.14
SMURF1-203ENST00000472627 KRTAP13-1Q8IUC0 172 aa7.94□□□□□ -1.14
SMURF1-203ENST00000472627 PYGO1Q9Y3Y4 419 aa7.94□□□□□ -1.14
SMURF1-203ENST00000472627 OSTCQ9NRP0 149 aa7.93□□□□□ -1.14
SMURF1-203ENST00000472627 NAT8BQ9UHF3 227 aa7.93□□□□□ -1.14
SMURF1-203ENST00000472627 NDUFA12Q9UI09 145 aa7.93□□□□□ -1.14
SMURF1-203ENST00000472627 IGLV4-3A0A075B6K6 122 aa7.92□□□□□ -1.14
SMURF1-203ENST00000472627 A0A1B0GW15 77 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms