RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 A0A096LNI7 61 aa2.17□□□□□ -2.06
XRN1-209ENST00000472625 TRAV1-1A0A0B4J248 108 aa2.17□□□□□ -2.06
XRN1-209ENST00000472625 IGKV3OR2-268A0A0C4DH90 116 aa2.17□□□□□ -2.06
XRN1-209ENST00000472625 C7orf77A4D0Y5 90 aa2.17□□□□□ -2.06
XRN1-209ENST00000472625 SDHAF1A6NFY7 115 aa2.17□□□□□ -2.06
XRN1-209ENST00000472625 HMSDA8MTL9 139 aa2.17□□□□□ -2.06
XRN1-209ENST00000472625 C1orf196B1AJZ1 125 aa2.17□□□□□ -2.06
XRN1-209ENST00000472625 PANO1I0J062 215 aa2.17□□□□□ -2.06
XRN1-209ENST00000472625 I3L3M4 83 aa2.17□□□□□ -2.06
XRN1-209ENST00000472625 COX7A2LO14548 114 aa2.17□□□□□ -2.06
XRN1-209ENST00000472625 BCL2L11O43521 198 aa2.17□□□□□ -2.06
XRN1-209ENST00000472625 MT-ND6P03923 174 aa2.17□□□□□ -2.06
XRN1-209ENST00000472625 NTF3P20783 257 aa2.17□□□□□ -2.06
XRN1-209ENST00000472625 XCL1P47992 114 aa2.17□□□□□ -2.06
XRN1-209ENST00000472625 SSTP61278 116 aa2.17□□□□□ -2.06
XRN1-209ENST00000472625 IFITM3Q01628 133 aa2.17□□□□□ -2.06
XRN1-209ENST00000472625 SYCNQ0VAF6 134 aa2.17□□□□□ -2.06
XRN1-209ENST00000472625 GAGE2BQ13066 116 aa2.17□□□□□ -2.06
XRN1-209ENST00000472625 RGS21Q2M5E4 152 aa2.17□□□□□ -2.06
XRN1-209ENST00000472625 GAGE2EQ4V326 116 aa2.17□□□□□ -2.06
XRN1-209ENST00000472625 HIGD2BQ4VC39 106 aa2.17□□□□□ -2.06
XRN1-209ENST00000472625 GAGE2AQ6NT46 116 aa2.17□□□□□ -2.06
XRN1-209ENST00000472625 CD164L2Q6UWJ8 174 aa2.17□□□□□ -2.06
XRN1-209ENST00000472625 OR10D4PQ8NGN7 298 aa2.17□□□□□ -2.06
XRN1-209ENST00000472625 DIRC1Q969H9 104 aa2.17□□□□□ -2.06
XRN1-209ENST00000472625 C2orf48Q96LS8 159 aa2.17□□□□□ -2.06
XRN1-209ENST00000472625 IMMP2LQ96T52 175 aa2.17□□□□□ -2.06
XRN1-209ENST00000472625 RPP21Q9H633 154 aaKnown RBP2.17□□□□□ -2.06
XRN1-209ENST00000472625 GNG13Q9P2W3 67 aa2.17□□□□□ -2.06
XRN1-209ENST00000472625 GAGE2DQ9UEU5 116 aa2.17□□□□□ -2.06
XRN1-209ENST00000472625 IGLV1-50A0A075B6I6 118 aa2.16□□□□□ -2.06
XRN1-209ENST00000472625 MUC21A0A0G2JKD1 596 aa2.16□□□□□ -2.06
XRN1-209ENST00000472625 TRBV6-5A0A0K0K1A5 114 aa2.16□□□□□ -2.06
XRN1-209ENST00000472625 MUC21A0A140T8X8 626 aa2.16□□□□□ -2.06
XRN1-209ENST00000472625 RAB19A4D1S5 217 aa2.16□□□□□ -2.06
XRN1-209ENST00000472625 C19orf71A6NCJ1 209 aa2.16□□□□□ -2.06
XRN1-209ENST00000472625 PPP1R2P9O14990 202 aa2.16□□□□□ -2.06
XRN1-209ENST00000472625 BCL2P10415 239 aa2.16□□□□□ -2.06
XRN1-209ENST00000472625 PMCHP20382 165 aa2.16□□□□□ -2.06
XRN1-209ENST00000472625 FCER1GP30273 86 aa2.16□□□□□ -2.06
XRN1-209ENST00000472625 UBE2D1P51668 147 aa2.16□□□□□ -2.06
XRN1-209ENST00000472625 RPL18AQ02543 176 aaKnown RBP2.16□□□□□ -2.06
XRN1-209ENST00000472625 KIAA1644Q3SXP7 199 aa2.16□□□□□ -2.06
XRN1-209ENST00000472625 LYZL1Q6UWQ5 148 aa2.16□□□□□ -2.06
XRN1-209ENST00000472625 MRPL52Q86TS9 123 aaKnown RBP2.16□□□□□ -2.06
XRN1-209ENST00000472625 LYPD6BQ8NI32 183 aa2.16□□□□□ -2.06
XRN1-209ENST00000472625 PRAC1Q96KF2 57 aa2.16□□□□□ -2.06
XRN1-209ENST00000472625 CAMK2N2Q96S95 79 aa2.16□□□□□ -2.06
XRN1-209ENST00000472625 KIR2DL4Q99706 377 aa2.16□□□□□ -2.06
XRN1-209ENST00000472625 ST20Q9HBF5 79 aa2.16□□□□□ -2.06
XRN1-209ENST00000472625 MED9Q9NWA0 146 aa2.16□□□□□ -2.06
XRN1-209ENST00000472625 CSDC2Q9Y534 153 aaKnown RBP2.16□□□□□ -2.06
XRN1-209ENST00000472625 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.15□□□□□ -2.07
XRN1-209ENST00000472625 TRBV27A0A0K0K1C4 114 aa2.15□□□□□ -2.07
XRN1-209ENST00000472625 LINC00959A0A1B0GUT2 108 aa2.15□□□□□ -2.07
XRN1-209ENST00000472625 A0A1B0GV50 99 aa2.15□□□□□ -2.07
XRN1-209ENST00000472625 IGKV2-29A2NJV5 120 aaPredicted RBP2.15□□□□□ -2.07
XRN1-209ENST00000472625 A8MWL6 223 aa2.15□□□□□ -2.07
XRN1-209ENST00000472625 TMEM250H0YL14 139 aa2.15□□□□□ -2.07
XRN1-209ENST00000472625 NDUFA1O15239 70 aa2.15□□□□□ -2.07
XRN1-209ENST00000472625 ESDP10768 282 aa2.15□□□□□ -2.07
XRN1-209ENST00000472625 KRTAP10-8P60410 259 aa2.15□□□□□ -2.07
XRN1-209ENST00000472625 C1orf137Q5JT78 98 aa2.15□□□□□ -2.07
XRN1-209ENST00000472625 FAM231DQ6ZW35 169 aa2.15□□□□□ -2.07
XRN1-209ENST00000472625 GATD1Q8NB37 220 aa2.15□□□□□ -2.07
XRN1-209ENST00000472625 CYTL1Q9NRR1 136 aa2.15□□□□□ -2.07
XRN1-209ENST00000472625 LPAP08519 4548 aa2.15□□□□□ -2.07
XRN1-209ENST00000472625 IGLV9-49A0A0B4J1Y8 123 aa2.14□□□□□ -2.07
XRN1-209ENST00000472625 A0A1B0GUT8 65 aa2.14□□□□□ -2.07
XRN1-209ENST00000472625 A0A1B0GW15 77 aa2.14□□□□□ -2.07
XRN1-209ENST00000472625 G3V3Q6 166 aa2.14□□□□□ -2.07
XRN1-209ENST00000472625 H0Y9J4 135 aa2.14□□□□□ -2.07
XRN1-209ENST00000472625 S100A8P05109 93 aa2.14□□□□□ -2.07
XRN1-209ENST00000472625 UBE2BP63146 152 aa2.14□□□□□ -2.07
XRN1-209ENST00000472625 SPAG11BQ08648 103 aa2.14□□□□□ -2.07
XRN1-209ENST00000472625 SRSF9Q13242 221 aaKnown RBP eCLIP2.14□□□□□ -2.07
XRN1-209ENST00000472625 TMEM241Q24JQ0 296 aa2.14□□□□□ -2.07
XRN1-209ENST00000472625 Q5BKY6 102 aa2.14□□□□□ -2.07
XRN1-209ENST00000472625 ADAMTSL4-AS1Q5T5F5 129 aa2.14□□□□□ -2.07
XRN1-209ENST00000472625 NUP35Q8NFH5 326 aa2.14□□□□□ -2.07
XRN1-209ENST00000472625 TMEM191AQ9H0A3 160 aa2.14□□□□□ -2.07
XRN1-209ENST00000472625 CDC42SE2Q9NRR3 84 aa2.14□□□□□ -2.07
XRN1-209ENST00000472625 SPANXA1Q9NS26 97 aa2.14□□□□□ -2.07
XRN1-209ENST00000472625 MRPL35Q9NZE8 188 aaKnown RBP2.14□□□□□ -2.07
XRN1-209ENST00000472625 CARHSP1Q9Y2V2 147 aaKnown RBP2.14□□□□□ -2.07
XRN1-209ENST00000472625 FAT4Q6V0I7 4981 aa2.13□□□□□ -2.07
XRN1-209ENST00000472625 TRBV20OR9-2A0A075B6H5 130 aa2.13□□□□□ -2.07
XRN1-209ENST00000472625 A0A087WZ39 114 aa2.13□□□□□ -2.07
XRN1-209ENST00000472625 TGIF2-C20orf24A0A0A6YYL0 155 aa2.13□□□□□ -2.07
XRN1-209ENST00000472625 TRAV13-1A0A0B4J241 112 aa2.13□□□□□ -2.07
XRN1-209ENST00000472625 TRBV30A0A0K0K1B3 111 aa2.13□□□□□ -2.07
XRN1-209ENST00000472625 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.13□□□□□ -2.07
XRN1-209ENST00000472625 GATCO43716 136 aaKnown RBP2.13□□□□□ -2.07
XRN1-209ENST00000472625 NUPR1O60356 82 aa2.13□□□□□ -2.07
XRN1-209ENST00000472625 IGLV7-43P04211 117 aa2.13□□□□□ -2.07
XRN1-209ENST00000472625 TLX1NBP0CAT3 122 aa2.13□□□□□ -2.07
XRN1-209ENST00000472625 FOXA3P55318 350 aaPredicted RBP2.13□□□□□ -2.07
XRN1-209ENST00000472625 RIGQ13278 110 aa2.13□□□□□ -2.07
XRN1-209ENST00000472625 C9orf116Q5BN46 136 aaPredicted RBP2.13□□□□□ -2.07
XRN1-209ENST00000472625 SLC51BQ86UW2 128 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms