RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 KRTAP10-4P60372 401 aaPredicted RBP9.01□□□□□ -0.97
TOP3B-215ENST00000470338 COX6A2Q02221 97 aa9.01□□□□□ -0.97
TOP3B-215ENST00000470338 C2orf66Q6UXQ4 117 aa9.01□□□□□ -0.97
TOP3B-215ENST00000470338 C5orf38Q86SI9 138 aa9.01□□□□□ -0.97
TOP3B-215ENST00000470338 PRSS3P2Q8NHM4 247 aa9.01□□□□□ -0.97
TOP3B-215ENST00000470338 SPACA4Q8TDM5 124 aa9.01□□□□□ -0.97
TOP3B-215ENST00000470338 CYSLTR1Q9Y271 337 aa9.01□□□□□ -0.97
TOP3B-215ENST00000470338 IFITM10A6NMD0 228 aa9□□□□□ -0.97
TOP3B-215ENST00000470338 CHTF8P0CG12 524 aa9□□□□□ -0.97
TOP3B-215ENST00000470338 TMEM141Q96I45 108 aa9□□□□□ -0.97
TOP3B-215ENST00000470338 MYCBP2O75592 4640 aa9□□□□□ -0.97
TOP3B-215ENST00000470338 IGLV4-69A0A075B6H9 119 aa8.99□□□□□ -0.97
TOP3B-215ENST00000470338 APOMO95445 188 aa8.99□□□□□ -0.97
TOP3B-215ENST00000470338 NPSP0C0P6 89 aa8.99□□□□□ -0.97
TOP3B-215ENST00000470338 SYCNQ0VAF6 134 aa8.99□□□□□ -0.97
TOP3B-215ENST00000470338 CARD19Q96LW7 228 aa8.99□□□□□ -0.97
TOP3B-215ENST00000470338 ALKBH7Q9BT30 221 aaPredicted RBP8.99□□□□□ -0.97
TOP3B-215ENST00000470338 A0A087WYN8 130 aa8.98□□□□□ -0.97
TOP3B-215ENST00000470338 IGIPA6NJ69 53 aa8.98□□□□□ -0.97
TOP3B-215ENST00000470338 MT-ND6P03923 174 aa8.98□□□□□ -0.97
TOP3B-215ENST00000470338 G0S2P27469 103 aa8.98□□□□□ -0.97
TOP3B-215ENST00000470338 DPH3Q96FX2 82 aa8.98□□□□□ -0.97
TOP3B-215ENST00000470338 C2orf48Q96LS8 159 aa8.98□□□□□ -0.97
TOP3B-215ENST00000470338 LINC01546A6NGU7 62 aa8.97□□□□□ -0.97
TOP3B-215ENST00000470338 LINC00242Q5T6M2 205 aa8.97□□□□□ -0.97
TOP3B-215ENST00000470338 TEX43Q6ZNM6 134 aa8.97□□□□□ -0.97
TOP3B-215ENST00000470338 OR10D4PQ8NGN7 298 aa8.97□□□□□ -0.97
TOP3B-215ENST00000470338 AMELXQ99217 191 aa8.97□□□□□ -0.97
TOP3B-215ENST00000470338 MRPL18Q9H0U6 180 aaKnown RBP8.97□□□□□ -0.97
TOP3B-215ENST00000470338 PLAC8Q9NZF1 115 aa8.97□□□□□ -0.97
TOP3B-215ENST00000470338 PKIGQ9Y2B9 76 aa8.97□□□□□ -0.97
TOP3B-215ENST00000470338 A0A096LNI7 61 aa8.96□□□□□ -0.98
TOP3B-215ENST00000470338 UBE2D1P51668 147 aa8.96□□□□□ -0.98
TOP3B-215ENST00000470338 Q6ZRU5 148 aa8.96□□□□□ -0.98
TOP3B-215ENST00000470338 LINC00173Q6ZV60 143 aa8.96□□□□□ -0.98
TOP3B-215ENST00000470338 TOMM6Q96B49 74 aa8.96□□□□□ -0.98
TOP3B-215ENST00000470338 A0A087WZ39 114 aa8.95□□□□□ -0.98
TOP3B-215ENST00000470338 IGKV2-24A0A0C4DH68 120 aa8.95□□□□□ -0.98
TOP3B-215ENST00000470338 FABP9Q0Z7S8 132 aa8.95□□□□□ -0.98
TOP3B-215ENST00000470338 MAJINQ3KP22 176 aa8.95□□□□□ -0.98
TOP3B-215ENST00000470338 ZC2HC1BQ5TFG8 222 aa8.95□□□□□ -0.98
TOP3B-215ENST00000470338 Q6ZN92 141 aa8.95□□□□□ -0.98
TOP3B-215ENST00000470338 CAMK2N2Q96S95 79 aa8.95□□□□□ -0.98
TOP3B-215ENST00000470338 VCX2Q9H322 139 aa8.95□□□□□ -0.98
TOP3B-215ENST00000470338 PKHD1L1Q86WI1 4243 aa8.95□□□□□ -0.98
TOP3B-215ENST00000470338 TGIF2-C20orf24A0A0A6YYL0 155 aa8.94□□□□□ -0.98
TOP3B-215ENST00000470338 F8WDY8 70 aa8.94□□□□□ -0.98
TOP3B-215ENST00000470338 RPL37AP61513 92 aaKnown RBP8.94□□□□□ -0.98
TOP3B-215ENST00000470338 SPAG11BQ08648 103 aa8.94□□□□□ -0.98
TOP3B-215ENST00000470338 FAM19A3Q7Z5A8 133 aa8.94□□□□□ -0.98
TOP3B-215ENST00000470338 ORAOV1Q8WV07 137 aa8.94□□□□□ -0.98
TOP3B-215ENST00000470338 TIMM17AQ99595 171 aa8.94□□□□□ -0.98
TOP3B-215ENST00000470338 C2orf88Q9BSF0 95 aa8.94□□□□□ -0.98
TOP3B-215ENST00000470338 LINC00474Q9P2X8 69 aa8.94□□□□□ -0.98
TOP3B-215ENST00000470338 RNF151Q2KHN1 245 aa8.93□□□□□ -0.98
TOP3B-215ENST00000470338 PAPPA-AS1Q5QFB9 102 aa8.93□□□□□ -0.98
TOP3B-215ENST00000470338 LOC107984640A0A0U1RRK4 108 aa8.92□□□□□ -0.98
TOP3B-215ENST00000470338 LINC01549A6NIU2 74 aa8.92□□□□□ -0.98
TOP3B-215ENST00000470338 ERASQ7Z444 233 aa8.92□□□□□ -0.98
TOP3B-215ENST00000470338 LINC01561Q8N1V8 128 aa8.92□□□□□ -0.98
TOP3B-215ENST00000470338 STPG4Q8N801 248 aa8.92□□□□□ -0.98
TOP3B-215ENST00000470338 TRAPPC1Q9Y5R8 145 aa8.92□□□□□ -0.98
TOP3B-215ENST00000470338 DMBT1Q9UGM3 2413 aaPredicted RBP8.92□□□□□ -0.98
TOP3B-215ENST00000470338 PTTG1IPP53801 180 aa8.91□□□□□ -0.98
TOP3B-215ENST00000470338 KIAA0087Q14695 138 aa8.91□□□□□ -0.98
TOP3B-215ENST00000470338 SCGB3A1Q96QR1 104 aa8.91□□□□□ -0.98
TOP3B-215ENST00000470338 SMCO4Q9NRQ5 59 aa8.91□□□□□ -0.98
TOP3B-215ENST00000470338 MRPL35Q9NZE8 188 aaKnown RBP8.91□□□□□ -0.98
TOP3B-215ENST00000470338 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.9□□□□□ -0.98
TOP3B-215ENST00000470338 NDUFA1O15239 70 aa8.89□□□□□ -0.99
TOP3B-215ENST00000470338 FA2HQ7L5A8 372 aa8.89□□□□□ -0.99
TOP3B-215ENST00000470338 YPEL4Q96NS1 127 aa8.89□□□□□ -0.99
TOP3B-215ENST00000470338 HERC1Q15751 4861 aa8.89□□□□□ -0.99
TOP3B-215ENST00000470338 LRP1Q07954 4544 aaKnown RBP8.88□□□□□ -0.99
TOP3B-215ENST00000470338 A0A0J9YXV3 536 aa8.88□□□□□ -0.99
TOP3B-215ENST00000470338 HERVK_113P63121 156 aa8.88□□□□□ -0.99
TOP3B-215ENST00000470338 SEC11AP67812 179 aa8.88□□□□□ -0.99
TOP3B-215ENST00000470338 GAGE2BQ13066 116 aa8.88□□□□□ -0.99
TOP3B-215ENST00000470338 C10orf25Q5T742 122 aa8.88□□□□□ -0.99
TOP3B-215ENST00000470338 UNQ6190/PRO20217Q6UXQ8 127 aa8.88□□□□□ -0.99
TOP3B-215ENST00000470338 CBLN2Q8IUK8 224 aa8.88□□□□□ -0.99
TOP3B-215ENST00000470338 C18orf32Q8TCD1 76 aa8.88□□□□□ -0.99
TOP3B-215ENST00000470338 FAT3Q8TDW7 4589 aa8.87□□□□□ -0.99
TOP3B-215ENST00000470338 KRTAP29-1A8MX34 341 aaPredicted RBP8.87□□□□□ -0.99
TOP3B-215ENST00000470338 HNRNPA3P51991 378 aaKnown RBP8.87□□□□□ -0.99
TOP3B-215ENST00000470338 C7orf33Q8WU49 177 aa8.87□□□□□ -0.99
TOP3B-215ENST00000470338 URB1-AS1Q96HZ7 61 aa8.87□□□□□ -0.99
TOP3B-215ENST00000470338 LINC00614P0C842 121 aa8.86□□□□□ -0.99
TOP3B-215ENST00000470338 TLX1NBP0CAT3 122 aa8.86□□□□□ -0.99
TOP3B-215ENST00000470338 C6orf48Q9UBA6 75 aa8.86□□□□□ -0.99
TOP3B-215ENST00000470338 CDKN2A-AS1Q9UH64 79 aa8.86□□□□□ -0.99
TOP3B-215ENST00000470338 A0A096LNJ9 63 aa8.85□□□□□ -0.99
TOP3B-215ENST00000470338 SCO1O75880 301 aa8.85□□□□□ -0.99
TOP3B-215ENST00000470338 RPL18AQ02543 176 aaKnown RBP8.85□□□□□ -0.99
TOP3B-215ENST00000470338 CST9LQ9H4G1 147 aa8.85□□□□□ -0.99
TOP3B-215ENST00000470338 GEMIN7Q9H840 131 aaKnown RBP8.85□□□□□ -0.99
TOP3B-215ENST00000470338 TRBV30A0A0K0K1B3 111 aa8.84□□□□□ -0.99
TOP3B-215ENST00000470338 TINCRA0A1B0GVN0 87 aa8.84□□□□□ -0.99
TOP3B-215ENST00000470338 A0A1W2PNN7 141 aa8.84□□□□□ -0.99
TOP3B-215ENST00000470338 C2orf82Q6UX34 121 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 148.6 ms