RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 IGHV3OR16-9A0A0B4J2B5 98 aa11.1□□□□□ -0.63
NCKIPSD-209ENST00000470006 NUPR1O60356 82 aa11.1□□□□□ -0.63
NCKIPSD-209ENST00000470006 C9orf129Q5T035 196 aaKnown RBP11.1□□□□□ -0.63
NCKIPSD-209ENST00000470006 TIMM21Q9BVV7 248 aa11.1□□□□□ -0.63
NCKIPSD-209ENST00000470006 CTDSP1Q9GZU7 261 aa11.1□□□□□ -0.63
NCKIPSD-209ENST00000470006 CRCT1Q9UGL9 99 aa11.1□□□□□ -0.63
NCKIPSD-209ENST00000470006 A0A1B0GUT8 65 aa11.09□□□□□ -0.63
NCKIPSD-209ENST00000470006 SUMO2P61956 95 aaKnown RBP11.09□□□□□ -0.63
NCKIPSD-209ENST00000470006 PACRGQ96M98 296 aaPredicted RBP11.09□□□□□ -0.63
NCKIPSD-209ENST00000470006 NDUFC2-KCTD14E9PQ53 114 aa11.08□□□□□ -0.64
NCKIPSD-209ENST00000470006 PPP1R17O96001 155 aa11.08□□□□□ -0.64
NCKIPSD-209ENST00000470006 IGLV7-46A0A075B6I9 117 aa11.07□□□□□ -0.64
NCKIPSD-209ENST00000470006 TGIF2-C20orf24A0A0A6YYL0 155 aa11.07□□□□□ -0.64
NCKIPSD-209ENST00000470006 TRBV30A0A0K0K1B3 111 aa11.07□□□□□ -0.64
NCKIPSD-209ENST00000470006 HMSDA8MTL9 139 aa11.07□□□□□ -0.64
NCKIPSD-209ENST00000470006 RPL28P46779 137 aaKnown RBP11.07□□□□□ -0.64
NCKIPSD-209ENST00000470006 TPRXLQ17RH7 258 aa11.07□□□□□ -0.64
NCKIPSD-209ENST00000470006 LCE2DQ5TA82 110 aaPredicted RBP11.07□□□□□ -0.64
NCKIPSD-209ENST00000470006 IFITM10A6NMD0 228 aa11.06□□□□□ -0.64
NCKIPSD-209ENST00000470006 RPL39P62891 51 aaKnown RBP11.06□□□□□ -0.64
NCKIPSD-209ENST00000470006 LBHQ53QV2 105 aaPredicted RBP11.06□□□□□ -0.64
NCKIPSD-209ENST00000470006 C2orf82Q6UX34 121 aa11.06□□□□□ -0.64
NCKIPSD-209ENST00000470006 ANAPC11Q9NYG5 84 aa11.06□□□□□ -0.64
NCKIPSD-209ENST00000470006 C22orf24Q9Y442 160 aa11.06□□□□□ -0.64
NCKIPSD-209ENST00000470006 FSIP2Q5CZC0 6907 aa11.06□□□□□ -0.64
NCKIPSD-209ENST00000470006 HIGD1CA8MV81 97 aa11.05□□□□□ -0.64
NCKIPSD-209ENST00000470006 LINC01547P58512 204 aaPredicted RBP11.05□□□□□ -0.64
NCKIPSD-209ENST00000470006 HBBP68871 147 aa11.05□□□□□ -0.64
NCKIPSD-209ENST00000470006 LINC00173Q6ZV60 143 aa11.05□□□□□ -0.64
NCKIPSD-209ENST00000470006 PPP1R2P9O14990 202 aa11.04□□□□□ -0.64
NCKIPSD-209ENST00000470006 FAM231DQ6ZW35 169 aa11.04□□□□□ -0.64
NCKIPSD-209ENST00000470006 LINC00469Q8N7U9 141 aa11.04□□□□□ -0.64
NCKIPSD-209ENST00000470006 NRACQ8N912 160 aa11.04□□□□□ -0.64
NCKIPSD-209ENST00000470006 TAGLN2P37802 199 aaKnown RBP11.03□□□□□ -0.64
NCKIPSD-209ENST00000470006 KIAA0087Q14695 138 aa11.03□□□□□ -0.64
NCKIPSD-209ENST00000470006 CT83Q5H943 113 aa11.03□□□□□ -0.64
NCKIPSD-209ENST00000470006 LINC00304Q8N9R0 145 aa11.03□□□□□ -0.64
NCKIPSD-209ENST00000470006 CEBPGP53567 150 aa11.01□□□□□ -0.65
NCKIPSD-209ENST00000470006 RIGQ13278 110 aa11.01□□□□□ -0.65
NCKIPSD-209ENST00000470006 SPANXA1Q9NS26 97 aa11.01□□□□□ -0.65
NCKIPSD-209ENST00000470006 BCE1O60756 84 aa11□□□□□ -0.65
NCKIPSD-209ENST00000470006 LINC00242Q5T6M2 205 aa11□□□□□ -0.65
NCKIPSD-209ENST00000470006 ZNF727A8MUV8 499 aa10.99□□□□□ -0.65
NCKIPSD-209ENST00000470006 TCAPO15273 167 aa10.99□□□□□ -0.65
NCKIPSD-209ENST00000470006 MRPS36P82909 103 aaKnown RBP10.99□□□□□ -0.65
NCKIPSD-209ENST00000470006 KRTAP13-2Q52LG2 175 aa10.99□□□□□ -0.65
NCKIPSD-209ENST00000470006 FAM104AQ969W3 186 aa10.99□□□□□ -0.65
NCKIPSD-209ENST00000470006 XAGE1AQ9HD64 81 aa10.99□□□□□ -0.65
NCKIPSD-209ENST00000470006 PPDPFQ9H3Y8 114 aa10.98□□□□□ -0.65
NCKIPSD-209ENST00000470006 PRSS2P07478 247 aa10.97□□□□□ -0.65
NCKIPSD-209ENST00000470006 MRPL55Q7Z7F7 128 aaKnown RBP10.97□□□□□ -0.65
NCKIPSD-209ENST00000470006 CKS1BP61024 79 aa10.96□□□□□ -0.65
NCKIPSD-209ENST00000470006 MRPL51Q4U2R6 128 aaKnown RBP10.96□□□□□ -0.65
NCKIPSD-209ENST00000470006 C20orf78Q9BR46 151 aa10.96□□□□□ -0.65
NCKIPSD-209ENST00000470006 TOMM7Q9P0U1 55 aa10.96□□□□□ -0.65
NCKIPSD-209ENST00000470006 IGKV2D-26A0A0A0MRZ7 120 aa10.95□□□□□ -0.66
NCKIPSD-209ENST00000470006 RPL37AP8A6NKH3 93 aa10.94□□□□□ -0.66
NCKIPSD-209ENST00000470006 CKS2P33552 79 aa10.94□□□□□ -0.66
NCKIPSD-209ENST00000470006 UBE2AP49459 152 aa10.94□□□□□ -0.66
NCKIPSD-209ENST00000470006 TMEM250H0YL14 139 aa10.93□□□□□ -0.66
NCKIPSD-209ENST00000470006 IFI27P40305 119 aaPredicted RBP10.93□□□□□ -0.66
NCKIPSD-209ENST00000470006 RGS21Q2M5E4 152 aa10.93□□□□□ -0.66
NCKIPSD-209ENST00000470006 C6orf226Q5I0X4 101 aa10.93□□□□□ -0.66
NCKIPSD-209ENST00000470006 FAM104BQ5XKR9 115 aa10.93□□□□□ -0.66
NCKIPSD-209ENST00000470006 LINC00337Q8N6G1 96 aa10.93□□□□□ -0.66
NCKIPSD-209ENST00000470006 LINC00862A6NCI5 91 aa10.92□□□□□ -0.66
NCKIPSD-209ENST00000470006 SRSF3P84103 164 aaKnown RBP10.92□□□□□ -0.66
NCKIPSD-209ENST00000470006 FAM229BQ4G0N7 80 aa10.92□□□□□ -0.66
NCKIPSD-209ENST00000470006 TP73-AS1Q9UF72 201 aa10.92□□□□□ -0.66
NCKIPSD-209ENST00000470006 TNFRSF6BO95407 300 aa10.91□□□□□ -0.66
NCKIPSD-209ENST00000470006 RPL32P62910 135 aaKnown RBP10.91□□□□□ -0.66
NCKIPSD-209ENST00000470006 SMIM2Q9BVW6 85 aa10.91□□□□□ -0.66
NCKIPSD-209ENST00000470006 TRBV24-1A0A075B6N3 115 aa10.9□□□□□ -0.66
NCKIPSD-209ENST00000470006 GAGE10A6NGK3 116 aa10.9□□□□□ -0.66
NCKIPSD-209ENST00000470006 LINC00167Q96N53 147 aa10.9□□□□□ -0.66
NCKIPSD-209ENST00000470006 OSTCQ9NRP0 149 aa10.9□□□□□ -0.66
NCKIPSD-209ENST00000470006 Q6ZN92 141 aa10.89□□□□□ -0.67
NCKIPSD-209ENST00000470006 LINC01551Q86U37 167 aa10.89□□□□□ -0.67
NCKIPSD-209ENST00000470006 SMIM7Q9BQ49 75 aa10.89□□□□□ -0.67
NCKIPSD-209ENST00000470006 RAB5AP20339 215 aa10.88□□□□□ -0.67
NCKIPSD-209ENST00000470006 LINC01561Q8N1V8 128 aa10.88□□□□□ -0.67
NCKIPSD-209ENST00000470006 TMEM141Q96I45 108 aa10.88□□□□□ -0.67
NCKIPSD-209ENST00000470006 ALKBH7Q9BT30 221 aaPredicted RBP10.88□□□□□ -0.67
NCKIPSD-209ENST00000470006 IGLV4-3A0A075B6K6 122 aa10.87□□□□□ -0.67
NCKIPSD-209ENST00000470006 TEX43Q6ZNM6 134 aa10.87□□□□□ -0.67
NCKIPSD-209ENST00000470006 C2orf88Q9BSF0 95 aa10.87□□□□□ -0.67
NCKIPSD-209ENST00000470006 NAT8BQ9UHF3 227 aa10.87□□□□□ -0.67
NCKIPSD-209ENST00000470006 D6R8Y8 96 aa10.85□□□□□ -0.67
NCKIPSD-209ENST00000470006 V9GYV3 84 aa10.85□□□□□ -0.67
NCKIPSD-209ENST00000470006 NPYP01303 97 aa10.84□□□□□ -0.67
NCKIPSD-209ENST00000470006 CTAG1AP78358 180 aa10.84□□□□□ -0.67
NCKIPSD-209ENST00000470006 Q8IZM0 81 aa10.84□□□□□ -0.67
NCKIPSD-209ENST00000470006 EIF5A2Q9GZV4 153 aaKnown RBP10.84□□□□□ -0.67
NCKIPSD-209ENST00000470006 PYGO1Q9Y3Y4 419 aa10.84□□□□□ -0.67
NCKIPSD-209ENST00000470006 ASB16-AS1Q495Z4 193 aa10.83□□□□□ -0.68
NCKIPSD-209ENST00000470006 SLC51BQ86UW2 128 aa10.83□□□□□ -0.68
NCKIPSD-209ENST00000470006 F8VRH5 84 aa10.82□□□□□ -0.68
NCKIPSD-209ENST00000470006 ZC2HC1BQ5TFG8 222 aa10.82□□□□□ -0.68
NCKIPSD-209ENST00000470006 KRTAP13-1Q8IUC0 172 aa10.82□□□□□ -0.68
NCKIPSD-209ENST00000470006 NKAPP1Q8N9T2 125 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms