RNA–Protein interactions for RNA: ENST00000469558.1

MCF2L-222, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-222ENST00000469558 SPACA4Q8TDM5 124 aa7.42□□□□□ -1.22
MCF2L-222ENST00000469558 AMELXQ99217 191 aa7.42□□□□□ -1.22
MCF2L-222ENST00000469558 AP5S1Q9NUS5 200 aa7.42□□□□□ -1.22
MCF2L-222ENST00000469558 CYSLTR1Q9Y271 337 aa7.42□□□□□ -1.22
MCF2L-222ENST00000469558 IFITM10A6NMD0 228 aa7.41□□□□□ -1.22
MCF2L-222ENST00000469558 COX7A2LO14548 114 aa7.41□□□□□ -1.22
MCF2L-222ENST00000469558 SNAPINO95295 136 aa7.41□□□□□ -1.22
MCF2L-222ENST00000469558 MT-ND6P03923 174 aa7.41□□□□□ -1.22
MCF2L-222ENST00000469558 COX6A2Q02221 97 aa7.41□□□□□ -1.22
MCF2L-222ENST00000469558 COX19Q49B96 90 aa7.41□□□□□ -1.22
MCF2L-222ENST00000469558 LINC00242Q5T6M2 205 aa7.41□□□□□ -1.22
MCF2L-222ENST00000469558 PRSS3P2Q8NHM4 247 aa7.41□□□□□ -1.22
MCF2L-222ENST00000469558 URB1-AS1Q96HZ7 61 aa7.41□□□□□ -1.22
MCF2L-222ENST00000469558 TMEM141Q96I45 108 aa7.41□□□□□ -1.22
MCF2L-222ENST00000469558 IGLV4-69A0A075B6H9 119 aa7.4□□□□□ -1.22
MCF2L-222ENST00000469558 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.4□□□□□ -1.22
MCF2L-222ENST00000469558 UBE2D1P51668 147 aa7.4□□□□□ -1.22
MCF2L-222ENST00000469558 TOMM6Q96B49 74 aa7.4□□□□□ -1.22
MCF2L-222ENST00000469558 A0A096LNI7 61 aa7.39□□□□□ -1.23
MCF2L-222ENST00000469558 A0A096LNJ9 63 aa7.39□□□□□ -1.23
MCF2L-222ENST00000469558 FAM229AH3BQW9 127 aa7.39□□□□□ -1.23
MCF2L-222ENST00000469558 NPSP0C0P6 89 aa7.39□□□□□ -1.23
MCF2L-222ENST00000469558 FABP9Q0Z7S8 132 aa7.39□□□□□ -1.23
MCF2L-222ENST00000469558 Q6ZRU5 148 aa7.39□□□□□ -1.23
MCF2L-222ENST00000469558 FAM19A3Q7Z5A8 133 aa7.39□□□□□ -1.23
MCF2L-222ENST00000469558 SLC7A5P1Q8MH63 180 aa7.39□□□□□ -1.23
MCF2L-222ENST00000469558 INAFM2P0DMQ5 153 aa7.38□□□□□ -1.23
MCF2L-222ENST00000469558 SYCNQ0VAF6 134 aa7.38□□□□□ -1.23
MCF2L-222ENST00000469558 NDUFA5Q16718 116 aa7.38□□□□□ -1.23
MCF2L-222ENST00000469558 CARD19Q96LW7 228 aa7.38□□□□□ -1.23
MCF2L-222ENST00000469558 TIMM17AQ99595 171 aa7.38□□□□□ -1.23
MCF2L-222ENST00000469558 A0A087WYN8 130 aa7.37□□□□□ -1.23
MCF2L-222ENST00000469558 A0A087WZ39 114 aa7.37□□□□□ -1.23
MCF2L-222ENST00000469558 MALP21145 153 aa7.37□□□□□ -1.23
MCF2L-222ENST00000469558 SPAG11BQ08648 103 aa7.37□□□□□ -1.23
MCF2L-222ENST00000469558 KIAA0087Q14695 138 aa7.37□□□□□ -1.23
MCF2L-222ENST00000469558 TEX43Q6ZNM6 134 aa7.37□□□□□ -1.23
MCF2L-222ENST00000469558 CBLN2Q8IUK8 224 aa7.37□□□□□ -1.23
MCF2L-222ENST00000469558 C18orf32Q8TCD1 76 aa7.37□□□□□ -1.23
MCF2L-222ENST00000469558 C2orf48Q96LS8 159 aa7.37□□□□□ -1.23
MCF2L-222ENST00000469558 PLAC8Q9NZF1 115 aa7.37□□□□□ -1.23
MCF2L-222ENST00000469558 ZNF561-AS1K7EIQ3 104 aa7.36□□□□□ -1.23
MCF2L-222ENST00000469558 C10orf25Q5T742 122 aa7.36□□□□□ -1.23
MCF2L-222ENST00000469558 OR10D4PQ8NGN7 298 aa7.36□□□□□ -1.23
MCF2L-222ENST00000469558 ORAOV1Q8WV07 137 aa7.36□□□□□ -1.23
MCF2L-222ENST00000469558 TRAPPC1Q9Y5R8 145 aa7.36□□□□□ -1.23
MCF2L-222ENST00000469558 IGKV2-24A0A0C4DH68 120 aa7.35□□□□□ -1.23
MCF2L-222ENST00000469558 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.35□□□□□ -1.23
MCF2L-222ENST00000469558 HNRNPA3P51991 378 aaKnown RBP7.35□□□□□ -1.23
MCF2L-222ENST00000469558 ERASQ7Z444 233 aa7.35□□□□□ -1.23
MCF2L-222ENST00000469558 HERC1Q15751 4861 aa7.35□□□□□ -1.23
MCF2L-222ENST00000469558 DMBT1Q9UGM3 2413 aaPredicted RBP7.35□□□□□ -1.23
MCF2L-222ENST00000469558 LRP1Q07954 4544 aaKnown RBP7.34□□□□□ -1.23
MCF2L-222ENST00000469558 A0A0J9YXV3 536 aa7.34□□□□□ -1.23
MCF2L-222ENST00000469558 PLA2G1BP04054 148 aaKnown RBP7.34□□□□□ -1.23
MCF2L-222ENST00000469558 CAMK2N2Q96S95 79 aa7.34□□□□□ -1.23
MCF2L-222ENST00000469558 VCX2Q9H322 139 aa7.34□□□□□ -1.23
MCF2L-222ENST00000469558 APOMO95445 188 aa7.33□□□□□ -1.24
MCF2L-222ENST00000469558 MAJINQ3KP22 176 aa7.33□□□□□ -1.24
MCF2L-222ENST00000469558 UNQ6190/PRO20217Q6UXQ8 127 aa7.33□□□□□ -1.24
MCF2L-222ENST00000469558 Q6ZN92 141 aa7.33□□□□□ -1.24
MCF2L-222ENST00000469558 FA2HQ7L5A8 372 aa7.33□□□□□ -1.24
MCF2L-222ENST00000469558 LINC01561Q8N1V8 128 aa7.33□□□□□ -1.24
MCF2L-222ENST00000469558 SCGB3A1Q96QR1 104 aa7.33□□□□□ -1.24
MCF2L-222ENST00000469558 C2orf88Q9BSF0 95 aa7.33□□□□□ -1.24
MCF2L-222ENST00000469558 FAT3Q8TDW7 4589 aa7.32□□□□□ -1.24
MCF2L-222ENST00000469558 PTTG1IPP53801 180 aa7.32□□□□□ -1.24
MCF2L-222ENST00000469558 STPG4Q8N801 248 aa7.32□□□□□ -1.24
MCF2L-222ENST00000469558 MRPL35Q9NZE8 188 aaKnown RBP7.32□□□□□ -1.24
MCF2L-222ENST00000469558 C6orf48Q9UBA6 75 aa7.32□□□□□ -1.24
MCF2L-222ENST00000469558 CDKN2A-AS1Q9UH64 79 aa7.32□□□□□ -1.24
MCF2L-222ENST00000469558 IGLV5-45A0A087WSX0 123 aa7.31□□□□□ -1.24
MCF2L-222ENST00000469558 LOC107984640A0A0U1RRK4 108 aa7.31□□□□□ -1.24
MCF2L-222ENST00000469558 G0S2P27469 103 aa7.31□□□□□ -1.24
MCF2L-222ENST00000469558 PMCHL1Q16048 86 aa7.31□□□□□ -1.24
MCF2L-222ENST00000469558 RNF151Q2KHN1 245 aa7.31□□□□□ -1.24
MCF2L-222ENST00000469558 PDZD11Q5EBL8 140 aa7.31□□□□□ -1.24
MCF2L-222ENST00000469558 C2orf82Q6UX34 121 aa7.31□□□□□ -1.24
MCF2L-222ENST00000469558 CST9LQ9H4G1 147 aa7.31□□□□□ -1.24
MCF2L-222ENST00000469558 SMCO4Q9NRQ5 59 aa7.31□□□□□ -1.24
MCF2L-222ENST00000469558 F8WDY8 70 aa7.3□□□□□ -1.24
MCF2L-222ENST00000469558 LINC00614P0C842 121 aa7.3□□□□□ -1.24
MCF2L-222ENST00000469558 RPL37AP61513 92 aaKnown RBP7.3□□□□□ -1.24
MCF2L-222ENST00000469558 PAPPA-AS1Q5QFB9 102 aa7.3□□□□□ -1.24
MCF2L-222ENST00000469558 A0A1W2PNN7 141 aa7.29□□□□□ -1.24
MCF2L-222ENST00000469558 LINC01549A6NIU2 74 aa7.29□□□□□ -1.24
MCF2L-222ENST00000469558 NDUFA1O15239 70 aa7.29□□□□□ -1.24
MCF2L-222ENST00000469558 HERVK_113P63121 156 aa7.29□□□□□ -1.24
MCF2L-222ENST00000469558 Q6ZRP5 223 aa7.29□□□□□ -1.24
MCF2L-222ENST00000469558 TINCRA0A1B0GVN0 87 aa7.28□□□□□ -1.24
MCF2L-222ENST00000469558 SMIM1B2RUZ4 78 aa7.28□□□□□ -1.24
MCF2L-222ENST00000469558 TLX1NBP0CAT3 122 aa7.28□□□□□ -1.24
MCF2L-222ENST00000469558 LINC00310P59036 64 aa7.28□□□□□ -1.24
MCF2L-222ENST00000469558 GAGE2BQ13066 116 aa7.28□□□□□ -1.24
MCF2L-222ENST00000469558 KRTAP7-1Q8IUC3 87 aa7.28□□□□□ -1.24
MCF2L-222ENST00000469558 LINC00474Q9P2X8 69 aa7.28□□□□□ -1.24
MCF2L-222ENST00000469558 COLCA2A8K830 154 aa7.27□□□□□ -1.25
MCF2L-222ENST00000469558 HBDP02042 147 aa7.27□□□□□ -1.25
MCF2L-222ENST00000469558 PMVKQ15126 192 aa7.27□□□□□ -1.25
MCF2L-222ENST00000469558 C9orf116Q5BN46 136 aaPredicted RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms