RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 SRRM2Q9UQ35 2752 aaKnown RBP7.29□□□□□ -1.24
CDHR3-205ENST00000468143 IGLV4-3A0A075B6K6 122 aa7.29□□□□□ -1.24
CDHR3-205ENST00000468143 APOMO95445 188 aa7.29□□□□□ -1.24
CDHR3-205ENST00000468143 C2orf66Q6UXQ4 117 aa7.29□□□□□ -1.24
CDHR3-205ENST00000468143 PYGO1Q9Y3Y4 419 aa7.29□□□□□ -1.24
CDHR3-205ENST00000468143 FLG2Q5D862 2391 aaPredicted RBP7.28□□□□□ -1.24
CDHR3-205ENST00000468143 IGHV3OR16-9A0A0B4J2B5 98 aa7.28□□□□□ -1.24
CDHR3-205ENST00000468143 A0A0J9YXV3 536 aa7.28□□□□□ -1.24
CDHR3-205ENST00000468143 S100PP25815 95 aa7.28□□□□□ -1.24
CDHR3-205ENST00000468143 SPAG11BQ08648 103 aa7.28□□□□□ -1.24
CDHR3-205ENST00000468143 GAGE2BQ13066 116 aa7.28□□□□□ -1.24
CDHR3-205ENST00000468143 ORAOV1Q8WV07 137 aa7.28□□□□□ -1.24
CDHR3-205ENST00000468143 TMEM141Q96I45 108 aa7.28□□□□□ -1.24
CDHR3-205ENST00000468143 CYSLTR1Q9Y271 337 aa7.28□□□□□ -1.24
CDHR3-205ENST00000468143 TRAV9-1A0A075B6T8 112 aa7.27□□□□□ -1.25
CDHR3-205ENST00000468143 KRTAP29-1A8MX34 341 aaPredicted RBP7.27□□□□□ -1.25
CDHR3-205ENST00000468143 ORMDL2Q53FV1 153 aa7.27□□□□□ -1.25
CDHR3-205ENST00000468143 C10orf91Q5T1B1 145 aa7.27□□□□□ -1.25
CDHR3-205ENST00000468143 LINC00242Q5T6M2 205 aa7.27□□□□□ -1.25
CDHR3-205ENST00000468143 NXT2Q9NPJ8 142 aaKnown RBP7.27□□□□□ -1.25
CDHR3-205ENST00000468143 RPS10P5Q9NQ39 176 aa7.27□□□□□ -1.25
CDHR3-205ENST00000468143 LOC107984640A0A0U1RRK4 108 aa7.26□□□□□ -1.25
CDHR3-205ENST00000468143 TEX43Q6ZNM6 134 aa7.26□□□□□ -1.25
CDHR3-205ENST00000468143 C2orf48Q96LS8 159 aa7.26□□□□□ -1.25
CDHR3-205ENST00000468143 TGIF2-C20orf24A0A0A6YYL0 155 aa7.25□□□□□ -1.25
CDHR3-205ENST00000468143 UBE2D1P51668 147 aa7.25□□□□□ -1.25
CDHR3-205ENST00000468143 PTTG1IPP53801 180 aa7.25□□□□□ -1.25
CDHR3-205ENST00000468143 Q6ZN92 141 aa7.25□□□□□ -1.25
CDHR3-205ENST00000468143 OR10D4PQ8NGN7 298 aa7.25□□□□□ -1.25
CDHR3-205ENST00000468143 C7orf33Q8WU49 177 aa7.25□□□□□ -1.25
CDHR3-205ENST00000468143 GNB1LQ9BYB4 327 aa7.25□□□□□ -1.25
CDHR3-205ENST00000468143 VCX2Q9H322 139 aa7.25□□□□□ -1.25
CDHR3-205ENST00000468143 LINC00474Q9P2X8 69 aa7.25□□□□□ -1.25
CDHR3-205ENST00000468143 CARHSP1Q9Y2V2 147 aaKnown RBP7.25□□□□□ -1.25
CDHR3-205ENST00000468143 MYCBP2O75592 4640 aa7.25□□□□□ -1.25
CDHR3-205ENST00000468143 HERC1Q15751 4861 aa7.24□□□□□ -1.25
CDHR3-205ENST00000468143 IGIPA6NJ69 53 aa7.24□□□□□ -1.25
CDHR3-205ENST00000468143 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.24□□□□□ -1.25
CDHR3-205ENST00000468143 K7EMI3 77 aa7.24□□□□□ -1.25
CDHR3-205ENST00000468143 RPL18AQ02543 176 aaKnown RBP7.24□□□□□ -1.25
CDHR3-205ENST00000468143 C10orf25Q5T742 122 aa7.24□□□□□ -1.25
CDHR3-205ENST00000468143 UNQ6190/PRO20217Q6UXQ8 127 aa7.24□□□□□ -1.25
CDHR3-205ENST00000468143 LINC00173Q6ZV60 143 aa7.24□□□□□ -1.25
CDHR3-205ENST00000468143 C2orf88Q9BSF0 95 aa7.24□□□□□ -1.25
CDHR3-205ENST00000468143 ALKBH7Q9BT30 221 aaPredicted RBP7.24□□□□□ -1.25
CDHR3-205ENST00000468143 MRPL18Q9H0U6 180 aaKnown RBP7.24□□□□□ -1.25
CDHR3-205ENST00000468143 PKIGQ9Y2B9 76 aa7.24□□□□□ -1.25
CDHR3-205ENST00000468143 A0A087WZ39 114 aa7.23□□□□□ -1.25
CDHR3-205ENST00000468143 A0A1W2PNN7 141 aa7.23□□□□□ -1.25
CDHR3-205ENST00000468143 FABP9Q0Z7S8 132 aa7.23□□□□□ -1.25
CDHR3-205ENST00000468143 RHEBQ15382 184 aa7.23□□□□□ -1.25
CDHR3-205ENST00000468143 AMELXQ99217 191 aa7.23□□□□□ -1.25
CDHR3-205ENST00000468143 NDUFA1O15239 70 aa7.22□□□□□ -1.25
CDHR3-205ENST00000468143 APOC3P02656 99 aa7.22□□□□□ -1.25
CDHR3-205ENST00000468143 KIAA0087Q14695 138 aa7.22□□□□□ -1.25
CDHR3-205ENST00000468143 TOMM6Q96B49 74 aa7.22□□□□□ -1.25
CDHR3-205ENST00000468143 OXTP01178 125 aa7.21□□□□□ -1.26
CDHR3-205ENST00000468143 G0S2P27469 103 aa7.21□□□□□ -1.26
CDHR3-205ENST00000468143 RNF151Q2KHN1 245 aa7.21□□□□□ -1.26
CDHR3-205ENST00000468143 COX19Q49B96 90 aa7.21□□□□□ -1.26
CDHR3-205ENST00000468143 C2orf82Q6UX34 121 aa7.21□□□□□ -1.26
CDHR3-205ENST00000468143 SCGB3A1Q96QR1 104 aa7.21□□□□□ -1.26
CDHR3-205ENST00000468143 MRPL35Q9NZE8 188 aaKnown RBP7.21□□□□□ -1.26
CDHR3-205ENST00000468143 C6orf48Q9UBA6 75 aa7.21□□□□□ -1.26
CDHR3-205ENST00000468143 NPSP0C0P6 89 aa7.2□□□□□ -1.26
CDHR3-205ENST00000468143 C9orf116Q5BN46 136 aaPredicted RBP7.2□□□□□ -1.26
CDHR3-205ENST00000468143 F8WDY8 70 aa7.19□□□□□ -1.26
CDHR3-205ENST00000468143 MT-ND6P03923 174 aa7.19□□□□□ -1.26
CDHR3-205ENST00000468143 PRR3P79522 188 aaKnown RBP7.19□□□□□ -1.26
CDHR3-205ENST00000468143 GAGE2EQ4V326 116 aa7.19□□□□□ -1.26
CDHR3-205ENST00000468143 PAPPA-AS1Q5QFB9 102 aa7.19□□□□□ -1.26
CDHR3-205ENST00000468143 Q6ZRP5 223 aa7.19□□□□□ -1.26
CDHR3-205ENST00000468143 FA2HQ7L5A8 372 aa7.19□□□□□ -1.26
CDHR3-205ENST00000468143 ERASQ7Z444 233 aa7.19□□□□□ -1.26
CDHR3-205ENST00000468143 TIMM17AQ99595 171 aa7.19□□□□□ -1.26
CDHR3-205ENST00000468143 TOMM7Q9P0U1 55 aa7.19□□□□□ -1.26
CDHR3-205ENST00000468143 GAGE2DQ9UEU5 116 aa7.19□□□□□ -1.26
CDHR3-205ENST00000468143 TRAPPC1Q9Y5R8 145 aa7.19□□□□□ -1.26
CDHR3-205ENST00000468143 DMBT1Q9UGM3 2413 aaPredicted RBP7.19□□□□□ -1.26
CDHR3-205ENST00000468143 LINC01546A6NGU7 62 aa7.18□□□□□ -1.26
CDHR3-205ENST00000468143 PHF5AQ7RTV0 110 aaKnown RBP7.18□□□□□ -1.26
CDHR3-205ENST00000468143 FAM19A3Q7Z5A8 133 aa7.18□□□□□ -1.26
CDHR3-205ENST00000468143 GEMIN7Q9H840 131 aaKnown RBP7.18□□□□□ -1.26
CDHR3-205ENST00000468143 SMCO4Q9NRQ5 59 aa7.18□□□□□ -1.26
CDHR3-205ENST00000468143 CDKN2A-AS1Q9UH64 79 aa7.18□□□□□ -1.26
CDHR3-205ENST00000468143 LRP1Q07954 4544 aaKnown RBP7.18□□□□□ -1.26
CDHR3-205ENST00000468143 FAM168BA1KXE4 195 aa7.17□□□□□ -1.26
CDHR3-205ENST00000468143 SNAPINO95295 136 aa7.17□□□□□ -1.26
CDHR3-205ENST00000468143 PRSS2P07478 247 aa7.17□□□□□ -1.26
CDHR3-205ENST00000468143 HERVK_113P63121 156 aa7.17□□□□□ -1.26
CDHR3-205ENST00000468143 NDUFA5Q16718 116 aa7.17□□□□□ -1.26
CDHR3-205ENST00000468143 C6orf226Q5I0X4 101 aa7.17□□□□□ -1.26
CDHR3-205ENST00000468143 LINC01561Q8N1V8 128 aa7.17□□□□□ -1.26
CDHR3-205ENST00000468143 TLX1NBP0CAT3 122 aa7.16□□□□□ -1.26
CDHR3-205ENST00000468143 SEC11AP67812 179 aa7.16□□□□□ -1.26
CDHR3-205ENST00000468143 SVBPQ8N300 66 aa7.16□□□□□ -1.26
CDHR3-205ENST00000468143 URB1-AS1Q96HZ7 61 aa7.16□□□□□ -1.26
CDHR3-205ENST00000468143 PACRGQ96M98 296 aaPredicted RBP7.16□□□□□ -1.26
CDHR3-205ENST00000468143 CKS1BP61024 79 aa7.15□□□□□ -1.26
CDHR3-205ENST00000468143 FAM19A5Q7Z5A7 132 aaPredicted RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms