RNA–Protein interactions for RNA: ENST00000466288.1

CXCR4-203, Transcript of C-X-C motif chemokine receptor 4, humanhuman

TSL 1 (best)

Gene CXCR4, Length 1,485 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-203ENST00000466288 MRPL52Q86TS9 123 aaKnown RBP9.16□□□□□ -0.94
CXCR4-203ENST00000466288 NRACQ8N912 160 aa9.16□□□□□ -0.94
CXCR4-203ENST00000466288 LOC389332A0A1B0GUA5 103 aa9.15□□□□□ -0.94
CXCR4-203ENST00000466288 TMEM262E9PQX1 116 aa9.15□□□□□ -0.94
CXCR4-203ENST00000466288 CRPP02741 224 aa9.15□□□□□ -0.94
CXCR4-203ENST00000466288 FCER1GP30273 86 aa9.15□□□□□ -0.94
CXCR4-203ENST00000466288 LINC00587B1AMM8 73 aa9.15□□□□□ -0.95
CXCR4-203ENST00000466288 KIF25-AS1Q9Y6Z4 181 aa9.15□□□□□ -0.95
CXCR4-203ENST00000466288 A0A087WYN8 130 aa9.14□□□□□ -0.95
CXCR4-203ENST00000466288 SMKR1H3BMG3 65 aa9.14□□□□□ -0.95
CXCR4-203ENST00000466288 RHODO00212 210 aa9.14□□□□□ -0.95
CXCR4-203ENST00000466288 TCAPO15273 167 aa9.14□□□□□ -0.95
CXCR4-203ENST00000466288 NCR2O95944 276 aa9.14□□□□□ -0.95
CXCR4-203ENST00000466288 ORMDL2Q53FV1 153 aa9.14□□□□□ -0.95
CXCR4-203ENST00000466288 MPV17L2Q567V2 206 aa9.14□□□□□ -0.95
CXCR4-203ENST00000466288 LINC01545Q5VT33 79 aa9.14□□□□□ -0.95
CXCR4-203ENST00000466288 KRTAP26-1Q6PEX3 210 aa9.14□□□□□ -0.95
CXCR4-203ENST00000466288 ATP5LO75964 103 aa9.13□□□□□ -0.95
CXCR4-203ENST00000466288 KRTAP10-8P60410 259 aa9.13□□□□□ -0.95
CXCR4-203ENST00000466288 UBE2D3P61077 147 aa9.13□□□□□ -0.95
CXCR4-203ENST00000466288 SUMO2P61956 95 aaKnown RBP9.13□□□□□ -0.95
CXCR4-203ENST00000466288 UBE2D2P62837 147 aa9.13□□□□□ -0.95
CXCR4-203ENST00000466288 MIAQ16674 131 aa9.13□□□□□ -0.95
CXCR4-203ENST00000466288 LBHQ53QV2 105 aaPredicted RBP9.13□□□□□ -0.95
CXCR4-203ENST00000466288 MIEN1Q9BRT3 115 aa9.13□□□□□ -0.95
CXCR4-203ENST00000466288 SMIM2Q9BVW6 85 aa9.13□□□□□ -0.95
CXCR4-203ENST00000466288 A0A096LNJ9 63 aa9.12□□□□□ -0.95
CXCR4-203ENST00000466288 TRBV6-8A0A0A6YYG3 113 aa9.12□□□□□ -0.95
CXCR4-203ENST00000466288 A0A0J9YXV3 536 aa9.12□□□□□ -0.95
CXCR4-203ENST00000466288 TRBV6-5A0A0K0K1A5 114 aa9.12□□□□□ -0.95
CXCR4-203ENST00000466288 ANGP03950 147 aaKnown RBP9.12□□□□□ -0.95
CXCR4-203ENST00000466288 CHTF8P0CG12 524 aa9.12□□□□□ -0.95
CXCR4-203ENST00000466288 CNBPP62633 177 aaKnown RBP9.12□□□□□ -0.95
CXCR4-203ENST00000466288 FAM74A4Q5TZK3 123 aa9.12□□□□□ -0.95
CXCR4-203ENST00000466288 PRO1933Q9H354 126 aa9.12□□□□□ -0.95
CXCR4-203ENST00000466288 ST20Q9HBF5 79 aa9.12□□□□□ -0.95
CXCR4-203ENST00000466288 TRBV10-1A0A0K0K1A3 114 aa9.11□□□□□ -0.95
CXCR4-203ENST00000466288 HSBP1L1C9JCN9 74 aa9.11□□□□□ -0.95
CXCR4-203ENST00000466288 SPATA45Q537H7 98 aa9.11□□□□□ -0.95
CXCR4-203ENST00000466288 SPACA4Q8TDM5 124 aa9.11□□□□□ -0.95
CXCR4-203ENST00000466288 IFI27L1Q96BM0 104 aa9.11□□□□□ -0.95
CXCR4-203ENST00000466288 DPH3Q96FX2 82 aa9.11□□□□□ -0.95
CXCR4-203ENST00000466288 TRBV7-3A0A075B6L6 115 aa9.1□□□□□ -0.95
CXCR4-203ENST00000466288 A0A087WWL8 130 aa9.1□□□□□ -0.95
CXCR4-203ENST00000466288 H7C1H1 209 aa9.1□□□□□ -0.95
CXCR4-203ENST00000466288 RPL36AP83881 106 aaKnown RBP9.1□□□□□ -0.95
CXCR4-203ENST00000466288 RPL36ALQ969Q0 106 aaKnown RBP9.1□□□□□ -0.95
CXCR4-203ENST00000466288 KRTAP9-2Q9BYQ4 174 aa9.1□□□□□ -0.95
CXCR4-203ENST00000466288 PRR34Q9NV39 138 aa9.1□□□□□ -0.95
CXCR4-203ENST00000466288 PLAC8Q9NZF1 115 aa9.1□□□□□ -0.95
CXCR4-203ENST00000466288 UQCR10Q9UDW1 63 aa9.1□□□□□ -0.95
CXCR4-203ENST00000466288 PAM16Q9Y3D7 125 aa9.1□□□□□ -0.95
CXCR4-203ENST00000466288 VCYO14598 125 aa9.09□□□□□ -0.95
CXCR4-203ENST00000466288 MGPP08493 103 aa9.09□□□□□ -0.95
CXCR4-203ENST00000466288 IGHV3-64A0A075B6Q5 118 aa9.08□□□□□ -0.96
CXCR4-203ENST00000466288 SLPIP03973 132 aa9.08□□□□□ -0.96
CXCR4-203ENST00000466288 CLPSL2Q6UWE3 100 aa9.08□□□□□ -0.96
CXCR4-203ENST00000466288 LINC00173Q6ZV60 143 aa9.08□□□□□ -0.96
CXCR4-203ENST00000466288 C7orf33Q8WU49 177 aa9.08□□□□□ -0.96
CXCR4-203ENST00000466288 TRAV26-2A0A0B4J265 109 aa9.07□□□□□ -0.96
CXCR4-203ENST00000466288 TRBV27A0A0K0K1C4 114 aa9.07□□□□□ -0.96
CXCR4-203ENST00000466288 IGLC3P0DOY3 106 aa9.07□□□□□ -0.96
CXCR4-203ENST00000466288 POLR2KP53803 58 aaKnown RBP9.07□□□□□ -0.96
CXCR4-203ENST00000466288 PRR3P79522 188 aaKnown RBP9.07□□□□□ -0.96
CXCR4-203ENST00000466288 SUMO4Q6EEV6 95 aa9.07□□□□□ -0.96
CXCR4-203ENST00000466288 C14orf144Q96I85 54 aa9.07□□□□□ -0.96
CXCR4-203ENST00000466288 KIR2DL4Q99706 377 aa9.07□□□□□ -0.96
CXCR4-203ENST00000466288 PMCHL2Q9BQD1 86 aa9.07□□□□□ -0.96
CXCR4-203ENST00000466288 hDV102S1A0JD36 115 aa9.06□□□□□ -0.96
CXCR4-203ENST00000466288 F5H697 171 aa9.06□□□□□ -0.96
CXCR4-203ENST00000466288 LINC00269Q8N2A0 174 aa9.06□□□□□ -0.96
CXCR4-203ENST00000466288 TOMM6Q96B49 74 aa9.06□□□□□ -0.96
CXCR4-203ENST00000466288 CHCHD5Q9BSY4 110 aa9.06□□□□□ -0.96
CXCR4-203ENST00000466288 M0QY20 66 aa9.05□□□□□ -0.96
CXCR4-203ENST00000466288 CTAG1AP78358 180 aa9.05□□□□□ -0.96
CXCR4-203ENST00000466288 FAT4Q6V0I7 4981 aa9.05□□□□□ -0.96
CXCR4-203ENST00000466288 TRAV12-1A0A0B4J245 112 aa9.04□□□□□ -0.96
CXCR4-203ENST00000466288 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.04□□□□□ -0.96
CXCR4-203ENST00000466288 RBX1P62877 108 aa9.04□□□□□ -0.96
CXCR4-203ENST00000466288 NTM-AS1Q6ZSK4 140 aa9.04□□□□□ -0.96
CXCR4-203ENST00000466288 NEXN-AS1Q8NBZ9 246 aa9.04□□□□□ -0.96
CXCR4-203ENST00000466288 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.03□□□□□ -0.96
CXCR4-203ENST00000466288 ZNF56Q15929 161 aa9.03□□□□□ -0.96
CXCR4-203ENST00000466288 RPL39LQ96EH5 51 aaKnown RBP9.03□□□□□ -0.96
CXCR4-203ENST00000466288 IGLV10-54A0A075B6I4 117 aa9.02□□□□□ -0.96
CXCR4-203ENST00000466288 SDHAF1A6NFY7 115 aa9.02□□□□□ -0.96
CXCR4-203ENST00000466288 M0R143 59 aa9.02□□□□□ -0.96
CXCR4-203ENST00000466288 SPINK6Q6UWN8 80 aa9.02□□□□□ -0.96
CXCR4-203ENST00000466288 ERASQ7Z444 233 aa9.02□□□□□ -0.96
CXCR4-203ENST00000466288 TMEM141Q96I45 108 aa9.02□□□□□ -0.96
CXCR4-203ENST00000466288 CYSLTR1Q9Y271 337 aa9.02□□□□□ -0.96
CXCR4-203ENST00000466288 REG3GQ6UW15 175 aa9.02□□□□□ -0.97
CXCR4-203ENST00000466288 Q6ZN92 141 aa9.02□□□□□ -0.97
CXCR4-203ENST00000466288 ATOH7Q8N100 152 aa9.02□□□□□ -0.97
CXCR4-203ENST00000466288 I3L3M4 83 aa9.01□□□□□ -0.97
CXCR4-203ENST00000466288 NPSP0C0P6 89 aa9.01□□□□□ -0.97
CXCR4-203ENST00000466288 GAGE6Q13070 117 aa9.01□□□□□ -0.97
CXCR4-203ENST00000466288 SLC25A34Q6PIV7 304 aa9.01□□□□□ -0.97
CXCR4-203ENST00000466288 C2orf66Q6UXQ4 117 aa9.01□□□□□ -0.97
CXCR4-203ENST00000466288 SCGB3A1Q96QR1 104 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms