RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 LOC389332A0A1B0GUA5 103 aa8.45□□□□□ -1.06
R3HDM1-213ENST00000463230 LINC00518Q8N0U6 118 aa8.45□□□□□ -1.06
R3HDM1-213ENST00000463230 CYSLTR1Q9Y271 337 aa8.45□□□□□ -1.06
R3HDM1-213ENST00000463230 CHAC1Q9BUX1 264 aa8.44□□□□□ -1.06
R3HDM1-213ENST00000463230 LINC01549A6NIU2 74 aa8.44□□□□□ -1.06
R3HDM1-213ENST00000463230 PCP4L1A6NKN8 68 aa8.44□□□□□ -1.06
R3HDM1-213ENST00000463230 COX7A2LO14548 114 aa8.44□□□□□ -1.06
R3HDM1-213ENST00000463230 S100A6P06703 90 aa8.44□□□□□ -1.06
R3HDM1-213ENST00000463230 LINC01620Q4KN68 170 aa8.43□□□□□ -1.06
R3HDM1-213ENST00000463230 FAM104AQ969W3 186 aa8.43□□□□□ -1.06
R3HDM1-213ENST00000463230 KRTAP17-1Q9BYP8 105 aa8.43□□□□□ -1.06
R3HDM1-213ENST00000463230 TRAV13-1A0A0B4J241 112 aa8.42□□□□□ -1.06
R3HDM1-213ENST00000463230 SDIM1Q6ZPB5 146 aa8.42□□□□□ -1.06
R3HDM1-213ENST00000463230 PLA2G2DQ9UNK4 145 aa8.42□□□□□ -1.06
R3HDM1-213ENST00000463230 DNAH8Q96JB1 4490 aa8.42□□□□□ -1.06
R3HDM1-213ENST00000463230 LINC01546A6NGU7 62 aa8.42□□□□□ -1.06
R3HDM1-213ENST00000463230 C5orf52A6NGY3 159 aa8.42□□□□□ -1.06
R3HDM1-213ENST00000463230 APOMO95445 188 aa8.42□□□□□ -1.06
R3HDM1-213ENST00000463230 FABP9Q0Z7S8 132 aa8.42□□□□□ -1.06
R3HDM1-213ENST00000463230 TMEM141Q96I45 108 aa8.42□□□□□ -1.06
R3HDM1-213ENST00000463230 IFITM10A6NMD0 228 aa8.41□□□□□ -1.06
R3HDM1-213ENST00000463230 MALP21145 153 aa8.41□□□□□ -1.06
R3HDM1-213ENST00000463230 RNASE13Q5GAN3 156 aaKnown RBP8.41□□□□□ -1.06
R3HDM1-213ENST00000463230 Q5VSD8 79 aa8.41□□□□□ -1.06
R3HDM1-213ENST00000463230 C2orf66Q6UXQ4 117 aa8.41□□□□□ -1.06
R3HDM1-213ENST00000463230 SCXQ7RTU7 201 aa8.41□□□□□ -1.06
R3HDM1-213ENST00000463230 ALKBH7Q9BT30 221 aaPredicted RBP8.41□□□□□ -1.06
R3HDM1-213ENST00000463230 KRTAP4-5Q9BYR2 181 aa8.41□□□□□ -1.06
R3HDM1-213ENST00000463230 IGLV4-3A0A075B6K6 122 aa8.41□□□□□ -1.06
R3HDM1-213ENST00000463230 SLPIP03973 132 aa8.41□□□□□ -1.06
R3HDM1-213ENST00000463230 CIRBPQ14011 172 aaKnown RBP8.41□□□□□ -1.06
R3HDM1-213ENST00000463230 KIAA1644Q3SXP7 199 aa8.41□□□□□ -1.06
R3HDM1-213ENST00000463230 HIGD2BQ4VC39 106 aa8.41□□□□□ -1.06
R3HDM1-213ENST00000463230 PAPPA-AS1Q5QFB9 102 aa8.41□□□□□ -1.06
R3HDM1-213ENST00000463230 C12orf57Q99622 126 aa8.41□□□□□ -1.06
R3HDM1-213ENST00000463230 F8WDY8 70 aa8.4□□□□□ -1.06
R3HDM1-213ENST00000463230 Q6ZN92 141 aa8.4□□□□□ -1.06
R3HDM1-213ENST00000463230 TRGC2P03986 189 aa8.39□□□□□ -1.07
R3HDM1-213ENST00000463230 TEX43Q6ZNM6 134 aa8.39□□□□□ -1.07
R3HDM1-213ENST00000463230 PRSS3P2Q8NHM4 247 aa8.39□□□□□ -1.07
R3HDM1-213ENST00000463230 C2orf88Q9BSF0 95 aa8.39□□□□□ -1.07
R3HDM1-213ENST00000463230 OR10D4PQ8NGN7 298 aa8.39□□□□□ -1.07
R3HDM1-213ENST00000463230 TIMM17AQ99595 171 aa8.39□□□□□ -1.07
R3HDM1-213ENST00000463230 OPRPNQ99935 248 aaPredicted RBP8.39□□□□□ -1.07
R3HDM1-213ENST00000463230 IGIPA6NJ69 53 aa8.38□□□□□ -1.07
R3HDM1-213ENST00000463230 PLA2G1BP04054 148 aaKnown RBP8.38□□□□□ -1.07
R3HDM1-213ENST00000463230 LINC01561Q8N1V8 128 aa8.38□□□□□ -1.07
R3HDM1-213ENST00000463230 TOMM6Q96B49 74 aa8.38□□□□□ -1.07
R3HDM1-213ENST00000463230 C2orf48Q96LS8 159 aa8.38□□□□□ -1.07
R3HDM1-213ENST00000463230 IGHV3OR16-9A0A0B4J2B5 98 aa8.38□□□□□ -1.07
R3HDM1-213ENST00000463230 SMR3BP02814 79 aaPredicted RBP8.38□□□□□ -1.07
R3HDM1-213ENST00000463230 NDUFA6P56556 154 aa8.38□□□□□ -1.07
R3HDM1-213ENST00000463230 HAMPP81172 84 aa8.38□□□□□ -1.07
R3HDM1-213ENST00000463230 CIRBP-AS1Q8TBR5 109 aa8.38□□□□□ -1.07
R3HDM1-213ENST00000463230 CARD19Q96LW7 228 aa8.38□□□□□ -1.07
R3HDM1-213ENST00000463230 AMELXQ99217 191 aa8.38□□□□□ -1.07
R3HDM1-213ENST00000463230 SYCNQ0VAF6 134 aa8.37□□□□□ -1.07
R3HDM1-213ENST00000463230 VCX2Q9H322 139 aa8.37□□□□□ -1.07
R3HDM1-213ENST00000463230 FAM19A3Q7Z5A8 133 aa8.37□□□□□ -1.07
R3HDM1-213ENST00000463230 TRAPPC1Q9Y5R8 145 aa8.37□□□□□ -1.07
R3HDM1-213ENST00000463230 HIST1H2BKO60814 126 aa8.36□□□□□ -1.07
R3HDM1-213ENST00000463230 HIST1H2BJP06899 126 aa8.36□□□□□ -1.07
R3HDM1-213ENST00000463230 HIST1H2BOP23527 126 aa8.36□□□□□ -1.07
R3HDM1-213ENST00000463230 HIST1H2BBP33778 126 aa8.36□□□□□ -1.07
R3HDM1-213ENST00000463230 HIST1H2BDP58876 126 aa8.36□□□□□ -1.07
R3HDM1-213ENST00000463230 HIST1H2BCP62807 126 aa8.36□□□□□ -1.07
R3HDM1-213ENST00000463230 SEC11AP67812 179 aa8.36□□□□□ -1.07
R3HDM1-213ENST00000463230 HIST2H2BEQ16778 126 aa8.36□□□□□ -1.07
R3HDM1-213ENST00000463230 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.36□□□□□ -1.07
R3HDM1-213ENST00000463230 FA2HQ7L5A8 372 aa8.36□□□□□ -1.07
R3HDM1-213ENST00000463230 C5orf38Q86SI9 138 aa8.36□□□□□ -1.07
R3HDM1-213ENST00000463230 HIST1H2BHQ93079 126 aa8.36□□□□□ -1.07
R3HDM1-213ENST00000463230 HIST1H2BNQ99877 126 aa8.36□□□□□ -1.07
R3HDM1-213ENST00000463230 HIST1H2BMQ99879 126 aa8.36□□□□□ -1.07
R3HDM1-213ENST00000463230 LINC00474Q9P2X8 69 aa8.36□□□□□ -1.07
R3HDM1-213ENST00000463230 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.36□□□□□ -1.07
R3HDM1-213ENST00000463230 PCLOQ9Y6V0 5065 aa8.36□□□□□ -1.07
R3HDM1-213ENST00000463230 UBE2D1P51668 147 aa8.35□□□□□ -1.07
R3HDM1-213ENST00000463230 RNF151Q2KHN1 245 aa8.35□□□□□ -1.07
R3HDM1-213ENST00000463230 PDZD11Q5EBL8 140 aa8.35□□□□□ -1.07
R3HDM1-213ENST00000463230 ERASQ7Z444 233 aa8.35□□□□□ -1.07
R3HDM1-213ENST00000463230 SPACA4Q8TDM5 124 aa8.35□□□□□ -1.07
R3HDM1-213ENST00000463230 IGLV4-69A0A075B6H9 119 aa8.35□□□□□ -1.07
R3HDM1-213ENST00000463230 A0A087WZ39 114 aa8.35□□□□□ -1.07
R3HDM1-213ENST00000463230 LINC00242Q5T6M2 205 aa8.35□□□□□ -1.07
R3HDM1-213ENST00000463230 LINC00173Q6ZV60 143 aa8.35□□□□□ -1.07
R3HDM1-213ENST00000463230 VPS13BQ7Z7G8 4022 aa8.35□□□□□ -1.07
R3HDM1-213ENST00000463230 SPAG11BQ08648 103 aa8.34□□□□□ -1.07
R3HDM1-213ENST00000463230 INAFM2P0DMQ5 153 aa8.34□□□□□ -1.07
R3HDM1-213ENST00000463230 SCGB3A1Q96QR1 104 aa8.34□□□□□ -1.07
R3HDM1-213ENST00000463230 COX6A2Q02221 97 aa8.33□□□□□ -1.08
R3HDM1-213ENST00000463230 ORAOV1Q8WV07 137 aa8.33□□□□□ -1.08
R3HDM1-213ENST00000463230 CAMK2N2Q96S95 79 aa8.33□□□□□ -1.08
R3HDM1-213ENST00000463230 PLAC8Q9NZF1 115 aa8.33□□□□□ -1.08
R3HDM1-213ENST00000463230 LOC107984640A0A0U1RRK4 108 aa8.32□□□□□ -1.08
R3HDM1-213ENST00000463230 C18orf32Q8TCD1 76 aa8.32□□□□□ -1.08
R3HDM1-213ENST00000463230 ABCA13Q86UQ4 5058 aa8.32□□□□□ -1.08
R3HDM1-213ENST00000463230 PANO1I0J062 215 aa8.31□□□□□ -1.08
R3HDM1-213ENST00000463230 HERVK_113P63121 156 aa8.31□□□□□ -1.08
R3HDM1-213ENST00000463230 MRPL35Q9NZE8 188 aaKnown RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms