RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 PTTG1IPP53801 180 aa4.56□□□□□ -1.68
PTPRF-210ENST00000463041 Q6ZUT4 128 aa4.56□□□□□ -1.68
PTPRF-210ENST00000463041 OR10D4PQ8NGN7 298 aa4.56□□□□□ -1.68
PTPRF-210ENST00000463041 FAM104AQ969W3 186 aa4.56□□□□□ -1.68
PTPRF-210ENST00000463041 PRELID3AQ96N28 172 aa4.56□□□□□ -1.68
PTPRF-210ENST00000463041 CAMK2N2Q96S95 79 aa4.56□□□□□ -1.68
PTPRF-210ENST00000463041 LAMTOR2Q9Y2Q5 125 aa4.56□□□□□ -1.68
PTPRF-210ENST00000463041 PYGO1Q9Y3Y4 419 aa4.56□□□□□ -1.68
PTPRF-210ENST00000463041 MT1HL1P0DM35 61 aa4.55□□□□□ -1.68
PTPRF-210ENST00000463041 GAGE2BQ13066 116 aa4.55□□□□□ -1.68
PTPRF-210ENST00000463041 IFI27P40305 119 aaPredicted RBP4.54□□□□□ -1.68
PTPRF-210ENST00000463041 PRR3P79522 188 aaKnown RBP4.54□□□□□ -1.68
PTPRF-210ENST00000463041 SPAG11BQ08648 103 aa4.54□□□□□ -1.68
PTPRF-210ENST00000463041 SPINK6Q6UWN8 80 aa4.54□□□□□ -1.68
PTPRF-210ENST00000463041 Q6ZRP5 223 aa4.54□□□□□ -1.68
PTPRF-210ENST00000463041 IMMP2LQ96T52 175 aa4.54□□□□□ -1.68
PTPRF-210ENST00000463041 OPRPNQ99935 248 aaPredicted RBP4.54□□□□□ -1.68
PTPRF-210ENST00000463041 MRPL35Q9NZE8 188 aaKnown RBP4.54□□□□□ -1.68
PTPRF-210ENST00000463041 A0A087WZ39 114 aa4.53□□□□□ -1.68
PTPRF-210ENST00000463041 TGIF2-C20orf24A0A0A6YYL0 155 aa4.53□□□□□ -1.68
PTPRF-210ENST00000463041 LOC389332A0A1B0GUA5 103 aa4.53□□□□□ -1.68
PTPRF-210ENST00000463041 A0A1W2PNN7 141 aa4.53□□□□□ -1.68
PTPRF-210ENST00000463041 IFITM10A6NMD0 228 aa4.53□□□□□ -1.68
PTPRF-210ENST00000463041 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.53□□□□□ -1.68
PTPRF-210ENST00000463041 K7EMI3 77 aa4.53□□□□□ -1.68
PTPRF-210ENST00000463041 NDUFA1O15239 70 aa4.53□□□□□ -1.68
PTPRF-210ENST00000463041 G0S2P27469 103 aa4.53□□□□□ -1.68
PTPRF-210ENST00000463041 SRSF9Q13242 221 aaKnown RBP eCLIP4.53□□□□□ -1.68
PTPRF-210ENST00000463041 CLLU1Q5K131 121 aa4.53□□□□□ -1.68
PTPRF-210ENST00000463041 Q8N8P6 123 aa4.53□□□□□ -1.68
PTPRF-210ENST00000463041 ORAOV1Q8WV07 137 aa4.53□□□□□ -1.68
PTPRF-210ENST00000463041 TMEM141Q96I45 108 aa4.53□□□□□ -1.68
PTPRF-210ENST00000463041 LINC01600Q96MT4 127 aa4.53□□□□□ -1.68
PTPRF-210ENST00000463041 MAP1LC3AQ9H492 121 aa4.53□□□□□ -1.68
PTPRF-210ENST00000463041 PLA2G2DQ9UNK4 145 aa4.53□□□□□ -1.68
PTPRF-210ENST00000463041 UBR4Q5T4S7 5183 aa4.53□□□□□ -1.68
PTPRF-210ENST00000463041 IGLV4-3A0A075B6K6 122 aa4.52□□□□□ -1.69
PTPRF-210ENST00000463041 NPSP0C0P6 89 aa4.52□□□□□ -1.69
PTPRF-210ENST00000463041 TLX1NBP0CAT3 122 aa4.52□□□□□ -1.69
PTPRF-210ENST00000463041 ORMDL2Q53FV1 153 aa4.52□□□□□ -1.69
PTPRF-210ENST00000463041 C9orf116Q5BN46 136 aaPredicted RBP4.52□□□□□ -1.69
PTPRF-210ENST00000463041 LINC00242Q5T6M2 205 aa4.52□□□□□ -1.69
PTPRF-210ENST00000463041 REG3GQ6UW15 175 aa4.52□□□□□ -1.69
PTPRF-210ENST00000463041 TEX43Q6ZNM6 134 aa4.52□□□□□ -1.69
PTPRF-210ENST00000463041 LINC01561Q8N1V8 128 aa4.52□□□□□ -1.69
PTPRF-210ENST00000463041 CTDSP1Q9GZU7 261 aa4.52□□□□□ -1.69
PTPRF-210ENST00000463041 VCX2Q9H322 139 aa4.52□□□□□ -1.69
PTPRF-210ENST00000463041 CYSLTR1Q9Y271 337 aa4.52□□□□□ -1.69
PTPRF-210ENST00000463041 A0A0J9YXV3 536 aa4.51□□□□□ -1.69
PTPRF-210ENST00000463041 RPL18AQ02543 176 aaKnown RBP4.51□□□□□ -1.69
PTPRF-210ENST00000463041 KIAA0087Q14695 138 aa4.51□□□□□ -1.69
PTPRF-210ENST00000463041 UQCC3Q6UW78 93 aa4.51□□□□□ -1.69
PTPRF-210ENST00000463041 C2orf66Q6UXQ4 117 aa4.51□□□□□ -1.69
PTPRF-210ENST00000463041 UNQ6190/PRO20217Q6UXQ8 127 aa4.51□□□□□ -1.69
PTPRF-210ENST00000463041 Q6ZN92 141 aa4.51□□□□□ -1.69
PTPRF-210ENST00000463041 AMELXQ99217 191 aa4.51□□□□□ -1.69
PTPRF-210ENST00000463041 C2orf88Q9BSF0 95 aa4.51□□□□□ -1.69
PTPRF-210ENST00000463041 NXT2Q9NPJ8 142 aaKnown RBP4.51□□□□□ -1.69
PTPRF-210ENST00000463041 TRAV9-1A0A075B6T8 112 aa4.5□□□□□ -1.69
PTPRF-210ENST00000463041 TMEM218A2RU14 115 aa4.5□□□□□ -1.69
PTPRF-210ENST00000463041 UBE2D1P51668 147 aa4.5□□□□□ -1.69
PTPRF-210ENST00000463041 KRTAP10-8P60410 259 aa4.5□□□□□ -1.69
PTPRF-210ENST00000463041 PAPPA-AS1Q5QFB9 102 aa4.5□□□□□ -1.69
PTPRF-210ENST00000463041 C10orf25Q5T742 122 aa4.5□□□□□ -1.69
PTPRF-210ENST00000463041 TRBV30A0A0K0K1B3 111 aa4.49□□□□□ -1.69
PTPRF-210ENST00000463041 IGIPA6NJ69 53 aa4.49□□□□□ -1.69
PTPRF-210ENST00000463041 MT-ND6P03923 174 aa4.49□□□□□ -1.69
PTPRF-210ENST00000463041 SEC11AP67812 179 aa4.49□□□□□ -1.69
PTPRF-210ENST00000463041 FAM19A3Q7Z5A8 133 aa4.49□□□□□ -1.69
PTPRF-210ENST00000463041 PACRGQ96M98 296 aaPredicted RBP4.49□□□□□ -1.69
PTPRF-210ENST00000463041 C6orf48Q9UBA6 75 aa4.49□□□□□ -1.69
PTPRF-210ENST00000463041 PSORS1C2Q9UIG4 136 aa4.49□□□□□ -1.69
PTPRF-210ENST00000463041 LINC01549A6NIU2 74 aa4.48□□□□□ -1.69
PTPRF-210ENST00000463041 C6orf226Q5I0X4 101 aa4.48□□□□□ -1.69
PTPRF-210ENST00000463041 PHF5AQ7RTV0 110 aaKnown RBP4.48□□□□□ -1.69
PTPRF-210ENST00000463041 TIMM17AQ99595 171 aa4.48□□□□□ -1.69
PTPRF-210ENST00000463041 SEC11CQ9BY50 192 aa4.48□□□□□ -1.69
PTPRF-210ENST00000463041 NDUFC2-KCTD14E9PQ53 114 aa4.47□□□□□ -1.69
PTPRF-210ENST00000463041 PRSS2P07478 247 aa4.47□□□□□ -1.69
PTPRF-210ENST00000463041 S100PP25815 95 aa4.47□□□□□ -1.69
PTPRF-210ENST00000463041 HERVK_113P63121 156 aa4.47□□□□□ -1.69
PTPRF-210ENST00000463041 IFITM2Q01629 132 aa4.47□□□□□ -1.69
PTPRF-210ENST00000463041 KIAA1644Q3SXP7 199 aa4.47□□□□□ -1.69
PTPRF-210ENST00000463041 COX19Q49B96 90 aa4.47□□□□□ -1.69
PTPRF-210ENST00000463041 GAGE2EQ4V326 116 aa4.47□□□□□ -1.69
PTPRF-210ENST00000463041 C1orf137Q5JT78 98 aa4.47□□□□□ -1.69
PTPRF-210ENST00000463041 ZC2HC1BQ5TFG8 222 aa4.47□□□□□ -1.69
PTPRF-210ENST00000463041 LINC00173Q6ZV60 143 aa4.47□□□□□ -1.69
PTPRF-210ENST00000463041 ERASQ7Z444 233 aa4.47□□□□□ -1.69
PTPRF-210ENST00000463041 TOMM6Q96B49 74 aa4.47□□□□□ -1.69
PTPRF-210ENST00000463041 GNB1LQ9BYB4 327 aa4.47□□□□□ -1.69
PTPRF-210ENST00000463041 GAGE2DQ9UEU5 116 aa4.47□□□□□ -1.69
PTPRF-210ENST00000463041 FAM168BA1KXE4 195 aa4.46□□□□□ -1.7
PTPRF-210ENST00000463041 IGLV7-43P04211 117 aa4.46□□□□□ -1.7
PTPRF-210ENST00000463041 ADCYAP1P18509 176 aa4.46□□□□□ -1.7
PTPRF-210ENST00000463041 CKS1BP61024 79 aa4.46□□□□□ -1.7
PTPRF-210ENST00000463041 C2orf82Q6UX34 121 aa4.46□□□□□ -1.7
PTPRF-210ENST00000463041 Q8IZM0 81 aa4.46□□□□□ -1.7
PTPRF-210ENST00000463041 DIRC1Q969H9 104 aa4.46□□□□□ -1.7
PTPRF-210ENST00000463041 SCGB3A1Q96QR1 104 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms