RNA–Protein interactions for RNA: ENST00000462254.1

CSMD3-205, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-205ENST00000462254 DAD1P61803 113 aa3.16□□□□□ -1.9
CSMD3-205ENST00000462254 HIST1H2BCP62807 126 aa3.16□□□□□ -1.9
CSMD3-205ENST00000462254 HIST2H2BEQ16778 126 aa3.16□□□□□ -1.9
CSMD3-205ENST00000462254 IQCJQ1A5X6 159 aa3.16□□□□□ -1.9
CSMD3-205ENST00000462254 C12orf74Q32Q52 190 aa3.16□□□□□ -1.9
CSMD3-205ENST00000462254 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.16□□□□□ -1.9
CSMD3-205ENST00000462254 ZFP2Q6ZN57 461 aa3.16□□□□□ -1.9
CSMD3-205ENST00000462254 C18orf32Q8TCD1 76 aa3.16□□□□□ -1.9
CSMD3-205ENST00000462254 HIST1H2BHQ93079 126 aa3.16□□□□□ -1.9
CSMD3-205ENST00000462254 RPL39LQ96EH5 51 aaKnown RBP3.16□□□□□ -1.9
CSMD3-205ENST00000462254 PRELID3AQ96N28 172 aa3.16□□□□□ -1.9
CSMD3-205ENST00000462254 HIST1H2BNQ99877 126 aa3.16□□□□□ -1.9
CSMD3-205ENST00000462254 HIST1H2BMQ99879 126 aa3.16□□□□□ -1.9
CSMD3-205ENST00000462254 MEGF8Q7Z7M0 2845 aa3.15□□□□□ -1.9
CSMD3-205ENST00000462254 LOC389332A0A1B0GUA5 103 aa3.15□□□□□ -1.91
CSMD3-205ENST00000462254 M0QY20 66 aa3.15□□□□□ -1.91
CSMD3-205ENST00000462254 ATP5G1P05496 136 aa3.15□□□□□ -1.91
CSMD3-205ENST00000462254 CFC1BP0CG36 223 aa3.15□□□□□ -1.91
CSMD3-205ENST00000462254 CFC1P0CG37 223 aa3.15□□□□□ -1.91
CSMD3-205ENST00000462254 S100A2P29034 98 aa3.15□□□□□ -1.91
CSMD3-205ENST00000462254 CKS2P33552 79 aa3.15□□□□□ -1.91
CSMD3-205ENST00000462254 Q1RN00 199 aa3.15□□□□□ -1.91
CSMD3-205ENST00000462254 CAMK2N1Q7Z7J9 78 aa3.15□□□□□ -1.91
CSMD3-205ENST00000462254 ORMDL3Q8N138 153 aa3.15□□□□□ -1.91
CSMD3-205ENST00000462254 SLC25A29Q8N8R3 303 aa3.15□□□□□ -1.91
CSMD3-205ENST00000462254 TIMM17AQ99595 171 aa3.15□□□□□ -1.91
CSMD3-205ENST00000462254 IGLV2-18A0A075B6J9 118 aa3.14□□□□□ -1.91
CSMD3-205ENST00000462254 TRAV8-3A0A0A6YYJ7 113 aa3.14□□□□□ -1.91
CSMD3-205ENST00000462254 TRGV4A0A0C4DH28 118 aa3.14□□□□□ -1.91
CSMD3-205ENST00000462254 TRBV6-5A0A0K0K1A5 114 aa3.14□□□□□ -1.91
CSMD3-205ENST00000462254 A0A1B0GV72 72 aa3.14□□□□□ -1.91
CSMD3-205ENST00000462254 TRBV6-4A0A1B0GX49 114 aa3.14□□□□□ -1.91
CSMD3-205ENST00000462254 TSTD3H0UI37 97 aa3.14□□□□□ -1.91
CSMD3-205ENST00000462254 PPBPP02775 128 aa3.14□□□□□ -1.91
CSMD3-205ENST00000462254 LINC00694P0DN24 101 aa3.14□□□□□ -1.91
CSMD3-205ENST00000462254 HTN3P15516 51 aa3.14□□□□□ -1.91
CSMD3-205ENST00000462254 CRYBA4P53673 196 aa3.14□□□□□ -1.91
CSMD3-205ENST00000462254 POLR2KP53803 58 aaKnown RBP3.14□□□□□ -1.91
CSMD3-205ENST00000462254 SCGB1D4Q6XE38 83 aa3.14□□□□□ -1.91
CSMD3-205ENST00000462254 NEGR1Q7Z3B1 354 aa3.14□□□□□ -1.91
CSMD3-205ENST00000462254 DEFB104AQ8WTQ1 72 aa3.14□□□□□ -1.91
CSMD3-205ENST00000462254 TMEM101Q96IK0 257 aa3.14□□□□□ -1.91
CSMD3-205ENST00000462254 NIT2Q9NQR4 276 aa3.14□□□□□ -1.91
CSMD3-205ENST00000462254 RBM12B-AS1Q9P1G2 102 aa3.14□□□□□ -1.91
CSMD3-205ENST00000462254 A0A0J9YY99 117 aa3.13□□□□□ -1.91
CSMD3-205ENST00000462254 NDUFAF8A1L188 74 aa3.13□□□□□ -1.91
CSMD3-205ENST00000462254 SDHAF1A6NFY7 115 aa3.13□□□□□ -1.91
CSMD3-205ENST00000462254 H7C423 109 aa3.13□□□□□ -1.91
CSMD3-205ENST00000462254 NUPR1O60356 82 aa3.13□□□□□ -1.91
CSMD3-205ENST00000462254 DDTP30046 118 aa3.13□□□□□ -1.91
CSMD3-205ENST00000462254 IFI27P40305 119 aaPredicted RBP3.13□□□□□ -1.91
CSMD3-205ENST00000462254 NDUFA6P56556 154 aa3.13□□□□□ -1.91
CSMD3-205ENST00000462254 Q0VG73 95 aa3.13□□□□□ -1.91
CSMD3-205ENST00000462254 RHOHQ15669 191 aa3.13□□□□□ -1.91
CSMD3-205ENST00000462254 ZNRF2Q8NHG8 242 aa3.13□□□□□ -1.91
CSMD3-205ENST00000462254 SIGMAR1Q99720 223 aa3.13□□□□□ -1.91
CSMD3-205ENST00000462254 TMEM70Q9BUB7 260 aa3.13□□□□□ -1.91
CSMD3-205ENST00000462254 SMIM2Q9BVW6 85 aa3.13□□□□□ -1.91
CSMD3-205ENST00000462254 PRO0255Q9UI72 69 aa3.13□□□□□ -1.91
CSMD3-205ENST00000462254 HHLA3Q9XRX5 114 aa3.13□□□□□ -1.91
CSMD3-205ENST00000462254 LAMTOR2Q9Y2Q5 125 aa3.13□□□□□ -1.91
CSMD3-205ENST00000462254 TRBV7-3A0A075B6L6 115 aa3.12□□□□□ -1.91
CSMD3-205ENST00000462254 A0A096LNJ9 63 aa3.12□□□□□ -1.91
CSMD3-205ENST00000462254 DEFB131BA0A096LNP1 70 aa3.12□□□□□ -1.91
CSMD3-205ENST00000462254 A0A096LPF7 62 aa3.12□□□□□ -1.91
CSMD3-205ENST00000462254 TRAV10A0A0B4J240 114 aa3.12□□□□□ -1.91
CSMD3-205ENST00000462254 TRBV10-1A0A0K0K1A3 114 aa3.12□□□□□ -1.91
CSMD3-205ENST00000462254 TRBV27A0A0K0K1C4 114 aa3.12□□□□□ -1.91
CSMD3-205ENST00000462254 LINC01546A6NGU7 62 aa3.12□□□□□ -1.91
CSMD3-205ENST00000462254 UBE2D3P61077 147 aa3.12□□□□□ -1.91
CSMD3-205ENST00000462254 UBE2D2P62837 147 aa3.12□□□□□ -1.91
CSMD3-205ENST00000462254 CEMP1Q6PRD7 247 aaPredicted RBP3.12□□□□□ -1.91
CSMD3-205ENST00000462254 NTM-AS1Q6ZSK4 140 aa3.12□□□□□ -1.91
CSMD3-205ENST00000462254 Q8N8P6 123 aa3.12□□□□□ -1.91
CSMD3-205ENST00000462254 C20orf203Q8NBC4 194 aa3.12□□□□□ -1.91
CSMD3-205ENST00000462254 ORAOV1Q8WV07 137 aa3.12□□□□□ -1.91
CSMD3-205ENST00000462254 DNAJC30Q96LL9 226 aa3.12□□□□□ -1.91
CSMD3-205ENST00000462254 C20orf78Q9BR46 151 aa3.12□□□□□ -1.91
CSMD3-205ENST00000462254 PRADC1Q9BSG0 188 aa3.12□□□□□ -1.91
CSMD3-205ENST00000462254 ST20Q9HBF5 79 aa3.12□□□□□ -1.91
CSMD3-205ENST00000462254 NXT2Q9NPJ8 142 aaKnown RBP3.12□□□□□ -1.91
CSMD3-205ENST00000462254 LINC00587B1AMM8 73 aa3.11□□□□□ -1.91
CSMD3-205ENST00000462254 NDUFC2-KCTD14E9PQ53 114 aa3.11□□□□□ -1.91
CSMD3-205ENST00000462254 PPP1R17O96001 155 aa3.11□□□□□ -1.91
CSMD3-205ENST00000462254 ESDP10768 282 aa3.11□□□□□ -1.91
CSMD3-205ENST00000462254 KRTAP10-6P60371 365 aaPredicted RBP3.11□□□□□ -1.91
CSMD3-205ENST00000462254 PKIAP61925 76 aa3.11□□□□□ -1.91
CSMD3-205ENST00000462254 PMCHL1Q16048 86 aa3.11□□□□□ -1.91
CSMD3-205ENST00000462254 BATFQ16520 125 aa3.11□□□□□ -1.91
CSMD3-205ENST00000462254 BAGE3Q86Y29 109 aa3.11□□□□□ -1.91
CSMD3-205ENST00000462254 FAM19A2Q8N3H0 131 aa3.11□□□□□ -1.91
CSMD3-205ENST00000462254 CAMK2N2Q96S95 79 aa3.11□□□□□ -1.91
CSMD3-205ENST00000462254 CHAC1Q9BUX1 264 aa3.11□□□□□ -1.91
CSMD3-205ENST00000462254 FBN3Q75N90 2809 aa3.11□□□□□ -1.91
CSMD3-205ENST00000462254 IGHV1-24A0A0C4DH33 117 aa3.1□□□□□ -1.91
CSMD3-205ENST00000462254 H3BNG1 76 aa3.1□□□□□ -1.91
CSMD3-205ENST00000462254 I3L3M4 83 aa3.1□□□□□ -1.91
CSMD3-205ENST00000462254 ZC2HC1BQ5TFG8 222 aa3.1□□□□□ -1.91
CSMD3-205ENST00000462254 FA2HQ7L5A8 372 aa3.1□□□□□ -1.91
CSMD3-205ENST00000462254 DAZ4Q86SG3 579 aaKnown RBP3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms