RNA–Protein interactions for RNA: ENST00000461194.5

NUP50-212, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-212ENST00000461194 MT-ND4LP03901 98 aa4.46□□□□□ -1.7
NUP50-212ENST00000461194 FCER1GP30273 86 aa4.46□□□□□ -1.7
NUP50-212ENST00000461194 RPL32P62910 135 aaKnown RBP4.46□□□□□ -1.7
NUP50-212ENST00000461194 HAMPP81172 84 aa4.46□□□□□ -1.7
NUP50-212ENST00000461194 UQCC3Q6UW78 93 aa4.46□□□□□ -1.7
NUP50-212ENST00000461194 MRPL52Q86TS9 123 aaKnown RBP4.46□□□□□ -1.7
NUP50-212ENST00000461194 OR5A1Q8NGJ0 315 aa4.46□□□□□ -1.7
NUP50-212ENST00000461194 TMEM101Q96IK0 257 aa4.46□□□□□ -1.7
NUP50-212ENST00000461194 KIR2DL4Q99706 377 aa4.46□□□□□ -1.7
NUP50-212ENST00000461194 TMEM218A2RU14 115 aa4.45□□□□□ -1.7
NUP50-212ENST00000461194 D6R8Y8 96 aa4.45□□□□□ -1.7
NUP50-212ENST00000461194 PHOX2AO14813 284 aa4.45□□□□□ -1.7
NUP50-212ENST00000461194 PPBPP02775 128 aa4.45□□□□□ -1.7
NUP50-212ENST00000461194 SMR3BP02814 79 aaPredicted RBP4.45□□□□□ -1.7
NUP50-212ENST00000461194 Q5VSD8 79 aa4.45□□□□□ -1.7
NUP50-212ENST00000461194 STPG4Q8N801 248 aa4.45□□□□□ -1.7
NUP50-212ENST00000461194 C9orf163Q8N9P6 203 aa4.45□□□□□ -1.7
NUP50-212ENST00000461194 CHCHD10Q8WYQ3 142 aaPredicted RBP4.45□□□□□ -1.7
NUP50-212ENST00000461194 CDC42SE2Q9NRR3 84 aa4.45□□□□□ -1.7
NUP50-212ENST00000461194 CSDC2Q9Y534 153 aaKnown RBP4.45□□□□□ -1.7
NUP50-212ENST00000461194 LINC00959A0A1B0GUT2 108 aa4.44□□□□□ -1.7
NUP50-212ENST00000461194 TCAPO15273 167 aa4.44□□□□□ -1.7
NUP50-212ENST00000461194 NPYP01303 97 aa4.44□□□□□ -1.7
NUP50-212ENST00000461194 ADCYAP1P18509 176 aa4.44□□□□□ -1.7
NUP50-212ENST00000461194 CNBPP62633 177 aaKnown RBP4.44□□□□□ -1.7
NUP50-212ENST00000461194 SMAGPQ0VAQ4 97 aa4.44□□□□□ -1.7
NUP50-212ENST00000461194 TMEM136Q6ZRR5 245 aa4.44□□□□□ -1.7
NUP50-212ENST00000461194 SCXQ7RTU7 201 aa4.44□□□□□ -1.7
NUP50-212ENST00000461194 ORMDL3Q8N138 153 aa4.44□□□□□ -1.7
NUP50-212ENST00000461194 ZNF664Q8N3J9 261 aa4.44□□□□□ -1.7
NUP50-212ENST00000461194 IMMP2LQ96T52 175 aa4.44□□□□□ -1.7
NUP50-212ENST00000461194 CHAC1Q9BUX1 264 aa4.44□□□□□ -1.7
NUP50-212ENST00000461194 SMIM2Q9BVW6 85 aa4.44□□□□□ -1.7
NUP50-212ENST00000461194 UBE2D4Q9Y2X8 147 aa4.44□□□□□ -1.7
NUP50-212ENST00000461194 SS18Q15532 418 aa4.43□□□□□ -1.7
NUP50-212ENST00000461194 C15orf56Q8N910 161 aa4.43□□□□□ -1.7
NUP50-212ENST00000461194 CIRBP-AS1Q8TBR5 109 aa4.43□□□□□ -1.7
NUP50-212ENST00000461194 PRELID3AQ96N28 172 aa4.43□□□□□ -1.7
NUP50-212ENST00000461194 TIMM21Q9BVV7 248 aa4.43□□□□□ -1.7
NUP50-212ENST00000461194 SEC11CQ9BY50 192 aa4.43□□□□□ -1.7
NUP50-212ENST00000461194 GVQW2A0A096LPI5 108 aaPredicted RBP4.42□□□□□ -1.7
NUP50-212ENST00000461194 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.42□□□□□ -1.7
NUP50-212ENST00000461194 CCL25O15444 150 aa4.42□□□□□ -1.7
NUP50-212ENST00000461194 INAFM2P0DMQ5 153 aa4.42□□□□□ -1.7
NUP50-212ENST00000461194 XCL1P47992 114 aa4.42□□□□□ -1.7
NUP50-212ENST00000461194 CD164L2Q6UWJ8 174 aa4.42□□□□□ -1.7
NUP50-212ENST00000461194 SDIM1Q6ZPB5 146 aa4.42□□□□□ -1.7
NUP50-212ENST00000461194 COMMD7Q86VX2 200 aa4.42□□□□□ -1.7
NUP50-212ENST00000461194 LAMTOR2Q9Y2Q5 125 aa4.42□□□□□ -1.7
NUP50-212ENST00000461194 IGHV3-64A0A075B6Q5 118 aa4.41□□□□□ -1.7
NUP50-212ENST00000461194 IGHV1-58A0A0C4DH39 117 aa4.41□□□□□ -1.7
NUP50-212ENST00000461194 C1orf196B1AJZ1 125 aa4.41□□□□□ -1.7
NUP50-212ENST00000461194 SMIM1B2RUZ4 78 aa4.41□□□□□ -1.7
NUP50-212ENST00000461194 RAB5AP20339 215 aa4.41□□□□□ -1.7
NUP50-212ENST00000461194 HIGD2BQ4VC39 106 aa4.41□□□□□ -1.7
NUP50-212ENST00000461194 Q6ZUT4 128 aa4.41□□□□□ -1.7
NUP50-212ENST00000461194 TRAV9-1A0A075B6T8 112 aa4.4□□□□□ -1.71
NUP50-212ENST00000461194 TRAV13-1A0A0B4J241 112 aa4.4□□□□□ -1.71
NUP50-212ENST00000461194 RPL39P62891 51 aaKnown RBP4.4□□□□□ -1.71
NUP50-212ENST00000461194 MRPS36P82909 103 aaKnown RBP4.4□□□□□ -1.71
NUP50-212ENST00000461194 CIRBPQ14011 172 aaKnown RBP4.4□□□□□ -1.71
NUP50-212ENST00000461194 RNASE13Q5GAN3 156 aaKnown RBP4.4□□□□□ -1.71
NUP50-212ENST00000461194 C10orf91Q5T1B1 145 aa4.4□□□□□ -1.71
NUP50-212ENST00000461194 FAM104AQ969W3 186 aa4.4□□□□□ -1.71
NUP50-212ENST00000461194 MAP1LC3AQ9H492 121 aa4.4□□□□□ -1.71
NUP50-212ENST00000461194 SPANXA1Q9NS26 97 aa4.4□□□□□ -1.71
NUP50-212ENST00000461194 LOC389332A0A1B0GUA5 103 aa4.39□□□□□ -1.71
NUP50-212ENST00000461194 PANO1I0J062 215 aa4.39□□□□□ -1.71
NUP50-212ENST00000461194 COX7A2LO14548 114 aa4.39□□□□□ -1.71
NUP50-212ENST00000461194 IFI27P40305 119 aaPredicted RBP4.39□□□□□ -1.71
NUP50-212ENST00000461194 Q8N8P6 123 aa4.39□□□□□ -1.71
NUP50-212ENST00000461194 KRTAP2-2Q9BYT5 123 aa4.39□□□□□ -1.71
NUP50-212ENST00000461194 CARHSP1Q9Y2V2 147 aaKnown RBP4.39□□□□□ -1.71
NUP50-212ENST00000461194 PYGO1Q9Y3Y4 419 aa4.39□□□□□ -1.71
NUP50-212ENST00000461194 VPS13BQ7Z7G8 4022 aa4.38□□□□□ -1.71
NUP50-212ENST00000461194 K7EMI3 77 aa4.38□□□□□ -1.71
NUP50-212ENST00000461194 S100PP25815 95 aa4.38□□□□□ -1.71
NUP50-212ENST00000461194 COX6A2Q02221 97 aa4.38□□□□□ -1.71
NUP50-212ENST00000461194 RHEBQ15382 184 aa4.38□□□□□ -1.71
NUP50-212ENST00000461194 SPACA4Q8TDM5 124 aa4.38□□□□□ -1.71
NUP50-212ENST00000461194 OPRPNQ99935 248 aaPredicted RBP4.38□□□□□ -1.71
NUP50-212ENST00000461194 NXT2Q9NPJ8 142 aaKnown RBP4.38□□□□□ -1.71
NUP50-212ENST00000461194 IGLV4-3A0A075B6K6 122 aa4.37□□□□□ -1.71
NUP50-212ENST00000461194 IGHV3OR16-9A0A0B4J2B5 98 aa4.37□□□□□ -1.71
NUP50-212ENST00000461194 APOMO95445 188 aa4.37□□□□□ -1.71
NUP50-212ENST00000461194 CHTF8P0CG12 524 aa4.37□□□□□ -1.71
NUP50-212ENST00000461194 CFC1BP0CG36 223 aa4.37□□□□□ -1.71
NUP50-212ENST00000461194 CFC1P0CG37 223 aa4.37□□□□□ -1.71
NUP50-212ENST00000461194 KRTAP10-4P60372 401 aaPredicted RBP4.37□□□□□ -1.71
NUP50-212ENST00000461194 KIAA1644Q3SXP7 199 aa4.37□□□□□ -1.71
NUP50-212ENST00000461194 COX19Q49B96 90 aa4.37□□□□□ -1.71
NUP50-212ENST00000461194 ORMDL2Q53FV1 153 aa4.37□□□□□ -1.71
NUP50-212ENST00000461194 C2orf66Q6UXQ4 117 aa4.37□□□□□ -1.71
NUP50-212ENST00000461194 C5orf38Q86SI9 138 aa4.37□□□□□ -1.71
NUP50-212ENST00000461194 LINC00526Q96FQ7 95 aa4.37□□□□□ -1.71
NUP50-212ENST00000461194 CARD19Q96LW7 228 aa4.37□□□□□ -1.71
NUP50-212ENST00000461194 GNB1LQ9BYB4 327 aa4.37□□□□□ -1.71
NUP50-212ENST00000461194 CYSLTR1Q9Y271 337 aa4.37□□□□□ -1.71
NUP50-212ENST00000461194 MYCBP2O75592 4640 aa4.36□□□□□ -1.71
NUP50-212ENST00000461194 IGLV4-69A0A075B6H9 119 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms