RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 IGHV3OR16-9A0A0B4J2B5 98 aa13.13□□□□□ -0.31
CPNE1-220ENST00000458038 TLX1NBP0CAT3 122 aa13.13□□□□□ -0.31
CPNE1-220ENST00000458038 CKS2P33552 79 aa13.13□□□□□ -0.31
CPNE1-220ENST00000458038 MRPS36P82909 103 aaKnown RBP13.13□□□□□ -0.31
CPNE1-220ENST00000458038 ORAOV1Q8WV07 137 aa13.13□□□□□ -0.31
CPNE1-220ENST00000458038 IGLV7-43P04211 117 aa13.12□□□□□ -0.31
CPNE1-220ENST00000458038 SMIM27A0A1W2PRY6 76 aa13.11□□□□□ -0.31
CPNE1-220ENST00000458038 A0A087WZ39 114 aa13.1□□□□□ -0.31
CPNE1-220ENST00000458038 TNFRSF6BO95407 300 aa13.1□□□□□ -0.31
CPNE1-220ENST00000458038 S100A8P05109 93 aa13.1□□□□□ -0.31
CPNE1-220ENST00000458038 RPL23P62829 140 aaKnown RBP13.1□□□□□ -0.31
CPNE1-220ENST00000458038 RPL39P62891 51 aaKnown RBP13.1□□□□□ -0.31
CPNE1-220ENST00000458038 HBBP68871 147 aa13.09□□□□□ -0.31
CPNE1-220ENST00000458038 SMIM2Q9BVW6 85 aa13.09□□□□□ -0.31
CPNE1-220ENST00000458038 F8W036 122 aa13.08□□□□□ -0.32
CPNE1-220ENST00000458038 FAM104AQ969W3 186 aa13.08□□□□□ -0.32
CPNE1-220ENST00000458038 IFITM10A6NMD0 228 aa13.07□□□□□ -0.32
CPNE1-220ENST00000458038 H0Y9J4 135 aa13.07□□□□□ -0.32
CPNE1-220ENST00000458038 PPBPP02775 128 aa13.07□□□□□ -0.32
CPNE1-220ENST00000458038 ADIRFQ15847 76 aa13.07□□□□□ -0.32
CPNE1-220ENST00000458038 NAT8Q9UHE5 227 aa13.07□□□□□ -0.32
CPNE1-220ENST00000458038 IGLV1-50A0A075B6I6 118 aa13.06□□□□□ -0.32
CPNE1-220ENST00000458038 TGIF2-C20orf24A0A0A6YYL0 155 aa13.06□□□□□ -0.32
CPNE1-220ENST00000458038 UNQ6190/PRO20217Q6UXQ8 127 aa13.06□□□□□ -0.32
CPNE1-220ENST00000458038 PRR26Q8N8Z3 221 aa13.06□□□□□ -0.32
CPNE1-220ENST00000458038 C10orf25Q5T742 122 aa13.05□□□□□ -0.32
CPNE1-220ENST00000458038 SMDT1Q9H4I9 107 aa13.05□□□□□ -0.32
CPNE1-220ENST00000458038 D6R8Y8 96 aa13.04□□□□□ -0.32
CPNE1-220ENST00000458038 C6orf48Q9UBA6 75 aa13.04□□□□□ -0.32
CPNE1-220ENST00000458038 FAM168BA1KXE4 195 aa13.03□□□□□ -0.32
CPNE1-220ENST00000458038 RAB5AP20339 215 aa13.03□□□□□ -0.32
CPNE1-220ENST00000458038 PYGO1Q9Y3Y4 419 aa13.03□□□□□ -0.32
CPNE1-220ENST00000458038 TRBV30A0A0K0K1B3 111 aa13.02□□□□□ -0.33
CPNE1-220ENST00000458038 IFI27P40305 119 aaPredicted RBP13.02□□□□□ -0.33
CPNE1-220ENST00000458038 GAGE2EQ4V326 116 aa13.02□□□□□ -0.33
CPNE1-220ENST00000458038 FAM19A5Q7Z5A7 132 aaPredicted RBP13.02□□□□□ -0.33
CPNE1-220ENST00000458038 GAGE2DQ9UEU5 116 aa13.02□□□□□ -0.33
CPNE1-220ENST00000458038 NPYP01303 97 aa13.01□□□□□ -0.33
CPNE1-220ENST00000458038 KIAA0087Q14695 138 aa13.01□□□□□ -0.33
CPNE1-220ENST00000458038 A0A1B0GXF2 115 aa12.99□□□□□ -0.33
CPNE1-220ENST00000458038 M0QXV9 152 aa12.99□□□□□ -0.33
CPNE1-220ENST00000458038 UBE2BP63146 152 aa12.99□□□□□ -0.33
CPNE1-220ENST00000458038 PEA15Q15121 130 aa12.99□□□□□ -0.33
CPNE1-220ENST00000458038 MRPL54Q6P161 138 aaKnown RBP12.99□□□□□ -0.33
CPNE1-220ENST00000458038 KRTAP11-1Q8IUC1 163 aa12.99□□□□□ -0.33
CPNE1-220ENST00000458038 ORMDL3Q8N138 153 aa12.99□□□□□ -0.33
CPNE1-220ENST00000458038 LINC01561Q8N1V8 128 aa12.99□□□□□ -0.33
CPNE1-220ENST00000458038 NDUFC2-KCTD14E9PQ53 114 aa12.98□□□□□ -0.33
CPNE1-220ENST00000458038 RPL13AP40429 203 aaKnown RBP12.98□□□□□ -0.33
CPNE1-220ENST00000458038 LINC00242Q5T6M2 205 aa12.98□□□□□ -0.33
CPNE1-220ENST00000458038 PACRGQ96M98 296 aaPredicted RBP12.98□□□□□ -0.33
CPNE1-220ENST00000458038 TMEM141Q96I45 108 aa12.97□□□□□ -0.33
CPNE1-220ENST00000458038 LPAP08519 4548 aa12.97□□□□□ -0.33
CPNE1-220ENST00000458038 hCG_2014768A0A024R1R8 64 aa12.96□□□□□ -0.33
CPNE1-220ENST00000458038 C9JQL5 133 aa12.96□□□□□ -0.33
CPNE1-220ENST00000458038 KRTAP1-4P0C5Y4 121 aa12.96□□□□□ -0.33
CPNE1-220ENST00000458038 UBE2D1P51668 147 aa12.96□□□□□ -0.33
CPNE1-220ENST00000458038 TMEM136Q6ZRR5 245 aa12.96□□□□□ -0.33
CPNE1-220ENST00000458038 ATP5L2Q7Z4Y8 100 aa12.96□□□□□ -0.33
CPNE1-220ENST00000458038 KRTAP7-1Q8IUC3 87 aa12.96□□□□□ -0.33
CPNE1-220ENST00000458038 IGLV4-3A0A075B6K6 122 aa12.95□□□□□ -0.34
CPNE1-220ENST00000458038 PRELID3AQ96N28 172 aa12.95□□□□□ -0.34
CPNE1-220ENST00000458038 CARHSP1Q9Y2V2 147 aaKnown RBP12.95□□□□□ -0.34
CPNE1-220ENST00000458038 PRSS47A8MTI9 375 aa12.94□□□□□ -0.34
CPNE1-220ENST00000458038 TEX43Q6ZNM6 134 aa12.94□□□□□ -0.34
CPNE1-220ENST00000458038 C2orf88Q9BSF0 95 aa12.94□□□□□ -0.34
CPNE1-220ENST00000458038 LAMTOR2Q9Y2Q5 125 aa12.94□□□□□ -0.34
CPNE1-220ENST00000458038 C2orf82Q6UX34 121 aa12.92□□□□□ -0.34
CPNE1-220ENST00000458038 C9orf129Q5T035 196 aaKnown RBP12.91□□□□□ -0.34
CPNE1-220ENST00000458038 Q6ZN92 141 aa12.91□□□□□ -0.34
CPNE1-220ENST00000458038 PRSS2P07478 247 aa12.9□□□□□ -0.34
CPNE1-220ENST00000458038 NPSP0C0P6 89 aa12.9□□□□□ -0.34
CPNE1-220ENST00000458038 SRSF3P84103 164 aaKnown RBP12.9□□□□□ -0.34
CPNE1-220ENST00000458038 NUPR1O60356 82 aa12.89□□□□□ -0.35
CPNE1-220ENST00000458038 ZNF861PO60384 105 aa12.89□□□□□ -0.35
CPNE1-220ENST00000458038 CKS1BP61024 79 aa12.89□□□□□ -0.35
CPNE1-220ENST00000458038 CYSLTR1Q9Y271 337 aa12.89□□□□□ -0.35
CPNE1-220ENST00000458038 C6orf226Q5I0X4 101 aa12.88□□□□□ -0.35
CPNE1-220ENST00000458038 VCX2Q9H322 139 aa12.88□□□□□ -0.35
CPNE1-220ENST00000458038 MAP1LC3AQ9H492 121 aa12.88□□□□□ -0.35
CPNE1-220ENST00000458038 PRR4Q16378 134 aa12.87□□□□□ -0.35
CPNE1-220ENST00000458038 LBHQ53QV2 105 aaPredicted RBP12.87□□□□□ -0.35
CPNE1-220ENST00000458038 AMELXQ99217 191 aa12.87□□□□□ -0.35
CPNE1-220ENST00000458038 K7EMI3 77 aa12.86□□□□□ -0.35
CPNE1-220ENST00000458038 C2orf66Q6UXQ4 117 aa12.86□□□□□ -0.35
CPNE1-220ENST00000458038 Q8IZM0 81 aa12.86□□□□□ -0.35
CPNE1-220ENST00000458038 Q8N8P6 123 aa12.86□□□□□ -0.35
CPNE1-220ENST00000458038 LOC389332A0A1B0GUA5 103 aa12.85□□□□□ -0.35
CPNE1-220ENST00000458038 SEC11AP67812 179 aa12.85□□□□□ -0.35
CPNE1-220ENST00000458038 ORMDL2Q53FV1 153 aa12.85□□□□□ -0.35
CPNE1-220ENST00000458038 FAM19A3Q7Z5A8 133 aa12.85□□□□□ -0.35
CPNE1-220ENST00000458038 LINC00173Q6ZV60 143 aa12.84□□□□□ -0.35
CPNE1-220ENST00000458038 TOMM7Q9P0U1 55 aa12.84□□□□□ -0.35
CPNE1-220ENST00000458038 C22orf24Q9Y442 160 aa12.84□□□□□ -0.35
CPNE1-220ENST00000458038 G0S2P27469 103 aa12.83□□□□□ -0.36
CPNE1-220ENST00000458038 PAPPA-AS1Q5QFB9 102 aa12.83□□□□□ -0.36
CPNE1-220ENST00000458038 ALKBH7Q9BT30 221 aaPredicted RBP12.83□□□□□ -0.36
CPNE1-220ENST00000458038 TP73-AS1Q9UF72 201 aa12.83□□□□□ -0.36
CPNE1-220ENST00000458038 HERVK_113P63121 156 aa12.81□□□□□ -0.36
CPNE1-220ENST00000458038 IGIPA6NJ69 53 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms