RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 TMEM97Q5BJF2 176 aa5.89□□□□□ -1.47
RIF1-208ENST00000457745 DGAT2L7PQ6IED9 249 aa5.89□□□□□ -1.47
RIF1-208ENST00000457745 KRTAP26-1Q6PEX3 210 aa5.89□□□□□ -1.47
RIF1-208ENST00000457745 FAM19A3Q7Z5A8 133 aa5.89□□□□□ -1.47
RIF1-208ENST00000457745 LINC00269Q8N2A0 174 aa5.89□□□□□ -1.47
RIF1-208ENST00000457745 PLECQ15149 4684 aaKnown RBP5.89□□□□□ -1.47
RIF1-208ENST00000457745 IGLV10-54A0A075B6I4 117 aa5.88□□□□□ -1.47
RIF1-208ENST00000457745 IGLV5-45A0A087WSX0 123 aa5.88□□□□□ -1.47
RIF1-208ENST00000457745 LINC00959A0A1B0GUT2 108 aa5.88□□□□□ -1.47
RIF1-208ENST00000457745 A0A1B0GUV1 79 aa5.88□□□□□ -1.47
RIF1-208ENST00000457745 TMEM223A0PJW6 202 aa5.88□□□□□ -1.47
RIF1-208ENST00000457745 LINC00587B1AMM8 73 aa5.88□□□□□ -1.47
RIF1-208ENST00000457745 NPSP0C0P6 89 aa5.88□□□□□ -1.47
RIF1-208ENST00000457745 ZNF25P17030 456 aaPredicted RBP5.88□□□□□ -1.47
RIF1-208ENST00000457745 G0S2P27469 103 aa5.88□□□□□ -1.47
RIF1-208ENST00000457745 C2orf91Q6ZV80 131 aa5.88□□□□□ -1.47
RIF1-208ENST00000457745 KLK12Q9UKR0 248 aa5.88□□□□□ -1.47
RIF1-208ENST00000457745 MRPS16Q9Y3D3 137 aaKnown RBP5.88□□□□□ -1.47
RIF1-208ENST00000457745 CSMD3Q7Z407 3707 aa5.88□□□□□ -1.47
RIF1-208ENST00000457745 DNAH7Q8WXX0 4024 aa5.88□□□□□ -1.47
RIF1-208ENST00000457745 TINCRA0A1B0GVN0 87 aa5.87□□□□□ -1.47
RIF1-208ENST00000457745 LINC01549A6NIU2 74 aa5.87□□□□□ -1.47
RIF1-208ENST00000457745 ANGP03950 147 aaKnown RBP5.87□□□□□ -1.47
RIF1-208ENST00000457745 PLNP26678 52 aa5.87□□□□□ -1.47
RIF1-208ENST00000457745 CASC10Q5T4H9 136 aa5.87□□□□□ -1.47
RIF1-208ENST00000457745 TMEM170BQ5T4T1 132 aa5.87□□□□□ -1.47
RIF1-208ENST00000457745 SH2D6Q7Z4S9 175 aa5.87□□□□□ -1.47
RIF1-208ENST00000457745 C15orf53Q8NAA6 179 aa5.87□□□□□ -1.47
RIF1-208ENST00000457745 PLEKHB2Q96CS7 222 aa5.87□□□□□ -1.47
RIF1-208ENST00000457745 TMEM101Q96IK0 257 aa5.87□□□□□ -1.47
RIF1-208ENST00000457745 DNAH1Q9P2D7 4330 aa5.87□□□□□ -1.47
RIF1-208ENST00000457745 IGHV3OR16-9A0A0B4J2B5 98 aa5.86□□□□□ -1.47
RIF1-208ENST00000457745 SMIM1B2RUZ4 78 aa5.86□□□□□ -1.47
RIF1-208ENST00000457745 CCL25O15444 150 aa5.86□□□□□ -1.47
RIF1-208ENST00000457745 NMUP48645 174 aa5.86□□□□□ -1.47
RIF1-208ENST00000457745 PKIAP61925 76 aa5.86□□□□□ -1.47
RIF1-208ENST00000457745 REG3AQ06141 175 aa5.86□□□□□ -1.47
RIF1-208ENST00000457745 PRR34Q9NV39 138 aa5.86□□□□□ -1.47
RIF1-208ENST00000457745 VPS13DQ5THJ4 4388 aa5.86□□□□□ -1.47
RIF1-208ENST00000457745 TGP01266 2768 aa5.85□□□□□ -1.47
RIF1-208ENST00000457745 TRAV8-6A0A0B4J262 113 aa5.85□□□□□ -1.47
RIF1-208ENST00000457745 E9PLD3 99 aa5.85□□□□□ -1.47
RIF1-208ENST00000457745 DNAH10OSP0CZ25 163 aa5.85□□□□□ -1.47
RIF1-208ENST00000457745 COX8AP10176 69 aa5.85□□□□□ -1.47
RIF1-208ENST00000457745 XCL1P47992 114 aa5.85□□□□□ -1.47
RIF1-208ENST00000457745 S100A12P80511 92 aa5.85□□□□□ -1.47
RIF1-208ENST00000457745 LINC01556Q5JQF7 62 aa5.85□□□□□ -1.47
RIF1-208ENST00000457745 C5orf38Q86SI9 138 aa5.85□□□□□ -1.47
RIF1-208ENST00000457745 LINC00469Q8N7U9 141 aa5.85□□□□□ -1.47
RIF1-208ENST00000457745 C2orf88Q9BSF0 95 aa5.85□□□□□ -1.47
RIF1-208ENST00000457745 IGLV5-39A0A0G2JS06 123 aa5.84□□□□□ -1.47
RIF1-208ENST00000457745 FOXI1Q12951 378 aa5.84□□□□□ -1.47
RIF1-208ENST00000457745 PAPPA-AS1Q5QFB9 102 aa5.84□□□□□ -1.47
RIF1-208ENST00000457745 BOD1L2Q8IYS8 172 aa5.84□□□□□ -1.47
RIF1-208ENST00000457745 CHCHD10Q8WYQ3 142 aaPredicted RBP5.84□□□□□ -1.47
RIF1-208ENST00000457745 UBE2WQ96B02 151 aa5.84□□□□□ -1.47
RIF1-208ENST00000457745 GAGE12HA6NDE8 117 aa5.83□□□□□ -1.48
RIF1-208ENST00000457745 DDTP30046 118 aa5.83□□□□□ -1.48
RIF1-208ENST00000457745 C10orf126Q8N4M7 172 aa5.83□□□□□ -1.48
RIF1-208ENST00000457745 MIEN1Q9BRT3 115 aa5.83□□□□□ -1.48
RIF1-208ENST00000457745 UPK3BQ9BT76 320 aa5.83□□□□□ -1.48
RIF1-208ENST00000457745 NUPR2A6NF83 97 aa5.82□□□□□ -1.48
RIF1-208ENST00000457745 LEPROTO15243 131 aa5.82□□□□□ -1.48
RIF1-208ENST00000457745 SIVA1O15304 175 aa5.82□□□□□ -1.48
RIF1-208ENST00000457745 HERVK_113P63121 156 aa5.82□□□□□ -1.48
RIF1-208ENST00000457745 MUC7Q8TAX7 377 aa5.82□□□□□ -1.48
RIF1-208ENST00000457745 LINC00526Q96FQ7 95 aa5.82□□□□□ -1.48
RIF1-208ENST00000457745 GEMIN7Q9H840 131 aaKnown RBP5.82□□□□□ -1.48
RIF1-208ENST00000457745 KLK5Q9Y337 293 aaPredicted RBP5.82□□□□□ -1.48
RIF1-208ENST00000457745 TENM2Q9NT68 2774 aa5.82□□□□□ -1.48
RIF1-208ENST00000457745 A0A087WZ39 114 aa5.81□□□□□ -1.48
RIF1-208ENST00000457745 IGHV1-58A0A0C4DH39 117 aa5.81□□□□□ -1.48
RIF1-208ENST00000457745 HSBP1L1C9JCN9 74 aa5.81□□□□□ -1.48
RIF1-208ENST00000457745 J3QQQ9 107 aa5.81□□□□□ -1.48
RIF1-208ENST00000457745 CCL18P55774 89 aa5.81□□□□□ -1.48
RIF1-208ENST00000457745 WFDC2Q14508 124 aa5.81□□□□□ -1.48
RIF1-208ENST00000457745 SLC25A34Q6PIV7 304 aa5.81□□□□□ -1.48
RIF1-208ENST00000457745 Q9HAA7 133 aa5.81□□□□□ -1.48
RIF1-208ENST00000457745 UQCR10Q9UDW1 63 aa5.81□□□□□ -1.48
RIF1-208ENST00000457745 TSTD3H0UI37 97 aa5.8□□□□□ -1.48
RIF1-208ENST00000457745 K7EP13 123 aa5.8□□□□□ -1.48
RIF1-208ENST00000457745 CTAG1AP78358 180 aa5.8□□□□□ -1.48
RIF1-208ENST00000457745 SMAGPQ0VAQ4 97 aa5.8□□□□□ -1.48
RIF1-208ENST00000457745 KIAA0087Q14695 138 aa5.8□□□□□ -1.48
RIF1-208ENST00000457745 SS18Q15532 418 aa5.8□□□□□ -1.48
RIF1-208ENST00000457745 C6orf223Q8N319 242 aa5.8□□□□□ -1.48
RIF1-208ENST00000457745 Q9H8V8 135 aa5.8□□□□□ -1.48
RIF1-208ENST00000457745 MYMXA0A1B0GTQ4 84 aa5.79□□□□□ -1.48
RIF1-208ENST00000457745 ZNF815PA8K554 130 aa5.79□□□□□ -1.48
RIF1-208ENST00000457745 IBA57-AS1B1ANH7 110 aa5.79□□□□□ -1.48
RIF1-208ENST00000457745 DLEU1O43261 78 aa5.79□□□□□ -1.48
RIF1-208ENST00000457745 CD164L2Q6UWJ8 174 aa5.79□□□□□ -1.48
RIF1-208ENST00000457745 C2orf82Q6UX34 121 aa5.79□□□□□ -1.48
RIF1-208ENST00000457745 C15orf56Q8N910 161 aa5.79□□□□□ -1.48
RIF1-208ENST00000457745 ZNF625Q96I27 306 aaPredicted RBP5.79□□□□□ -1.48
RIF1-208ENST00000457745 LITAFQ99732 161 aa5.79□□□□□ -1.48
RIF1-208ENST00000457745 ALMS1Q8TCU4 4167 aa5.78□□□□□ -1.48
RIF1-208ENST00000457745 A0A0J9YXY3 114 aa5.78□□□□□ -1.48
RIF1-208ENST00000457745 HNRNPA3P51991 378 aaKnown RBP5.78□□□□□ -1.48
RIF1-208ENST00000457745 HERVK_113P61574 105 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms