RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 KRTAP10-4P60372 401 aaPredicted RBP15.8■□□□□ 0.12
MSH2-203ENST00000454849 A0A096LNI7 61 aa15.79■□□□□ 0.12
MSH2-203ENST00000454849 RHEBQ15382 184 aa15.79■□□□□ 0.12
MSH2-203ENST00000454849 CYSLTR1Q9Y271 337 aa15.79■□□□□ 0.12
MSH2-203ENST00000454849 PYGO1Q9Y3Y4 419 aa15.79■□□□□ 0.12
MSH2-203ENST00000454849 APOC3P02656 99 aa15.78■□□□□ 0.12
MSH2-203ENST00000454849 ORMDL2Q53FV1 153 aa15.78■□□□□ 0.12
MSH2-203ENST00000454849 TMEM141Q96I45 108 aa15.78■□□□□ 0.12
MSH2-203ENST00000454849 GNB1LQ9BYB4 327 aa15.78■□□□□ 0.12
MSH2-203ENST00000454849 NXT2Q9NPJ8 142 aaKnown RBP15.78■□□□□ 0.12
MSH2-203ENST00000454849 RPL37AP61513 92 aaKnown RBP15.77■□□□□ 0.12
MSH2-203ENST00000454849 Q6ZRU5 148 aa15.77■□□□□ 0.12
MSH2-203ENST00000454849 IGHV3OR16-9A0A0B4J2B5 98 aa15.76■□□□□ 0.11
MSH2-203ENST00000454849 SPAG11BQ08648 103 aa15.76■□□□□ 0.11
MSH2-203ENST00000454849 TGIF2-C20orf24A0A0A6YYL0 155 aa15.75■□□□□ 0.11
MSH2-203ENST00000454849 FABP9Q0Z7S8 132 aa15.75■□□□□ 0.11
MSH2-203ENST00000454849 CAMK2N2Q96S95 79 aa15.75■□□□□ 0.11
MSH2-203ENST00000454849 ALKBH7Q9BT30 221 aaPredicted RBP15.75■□□□□ 0.11
MSH2-203ENST00000454849 MRPL18Q9H0U6 180 aaKnown RBP15.75■□□□□ 0.11
MSH2-203ENST00000454849 MYCBP2O75592 4640 aa15.75■□□□□ 0.11
MSH2-203ENST00000454849 APOMO95445 188 aa15.74■□□□□ 0.11
MSH2-203ENST00000454849 LINC00242Q5T6M2 205 aa15.74■□□□□ 0.11
MSH2-203ENST00000454849 TEX43Q6ZNM6 134 aa15.74■□□□□ 0.11
MSH2-203ENST00000454849 ORAOV1Q8WV07 137 aa15.74■□□□□ 0.11
MSH2-203ENST00000454849 A0A0J9YXV3 536 aa15.73■□□□□ 0.11
MSH2-203ENST00000454849 STPG4Q8N801 248 aa15.73■□□□□ 0.11
MSH2-203ENST00000454849 IGIPA6NJ69 53 aa15.72■□□□□ 0.11
MSH2-203ENST00000454849 LINC00173Q6ZV60 143 aa15.72■□□□□ 0.11
MSH2-203ENST00000454849 VCX2Q9H322 139 aa15.72■□□□□ 0.11
MSH2-203ENST00000454849 PLAC8Q9NZF1 115 aa15.72■□□□□ 0.11
MSH2-203ENST00000454849 K7EMI3 77 aa15.7■□□□□ 0.1
MSH2-203ENST00000454849 UBE2D1P51668 147 aa15.7■□□□□ 0.1
MSH2-203ENST00000454849 GAGE2BQ13066 116 aa15.7■□□□□ 0.1
MSH2-203ENST00000454849 Q6ZN92 141 aa15.7■□□□□ 0.1
MSH2-203ENST00000454849 DMBT1Q9UGM3 2413 aaPredicted RBP15.7■□□□□ 0.1
MSH2-203ENST00000454849 HNRNPA3P51991 378 aaKnown RBP15.69■□□□□ 0.1
MSH2-203ENST00000454849 C2orf48Q96LS8 159 aa15.69■□□□□ 0.1
MSH2-203ENST00000454849 C2orf88Q9BSF0 95 aa15.69■□□□□ 0.1
MSH2-203ENST00000454849 COX19Q49B96 90 aa15.68■□□□□ 0.1
MSH2-203ENST00000454849 OR10D4PQ8NGN7 298 aa15.68■□□□□ 0.1
MSH2-203ENST00000454849 TOMM6Q96B49 74 aa15.68■□□□□ 0.1
MSH2-203ENST00000454849 AMELXQ99217 191 aa15.68■□□□□ 0.1
MSH2-203ENST00000454849 NDUFA5Q16718 116 aa15.67■□□□□ 0.1
MSH2-203ENST00000454849 C10orf25Q5T742 122 aa15.67■□□□□ 0.1
MSH2-203ENST00000454849 A0A087WZ39 114 aa15.66■□□□□ 0.1
MSH2-203ENST00000454849 LOC107984640A0A0U1RRK4 108 aa15.66■□□□□ 0.1
MSH2-203ENST00000454849 MT-ND6P03923 174 aa15.66■□□□□ 0.1
MSH2-203ENST00000454849 SVBPQ8N300 66 aa15.66■□□□□ 0.1
MSH2-203ENST00000454849 SCGB3A1Q96QR1 104 aa15.66■□□□□ 0.1
MSH2-203ENST00000454849 SNAPINO95295 136 aa15.65■□□□□ 0.1
MSH2-203ENST00000454849 UNQ6190/PRO20217Q6UXQ8 127 aa15.65■□□□□ 0.1
MSH2-203ENST00000454849 TRAPPC1Q9Y5R8 145 aa15.65■□□□□ 0.1
MSH2-203ENST00000454849 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.64■□□□□ 0.09
MSH2-203ENST00000454849 PTTG1IPP53801 180 aa15.64■□□□□ 0.09
MSH2-203ENST00000454849 FA2HQ7L5A8 372 aa15.64■□□□□ 0.09
MSH2-203ENST00000454849 RPL18AQ02543 176 aaKnown RBP15.63■□□□□ 0.09
MSH2-203ENST00000454849 J3QL48 77 aa15.62■□□□□ 0.09
MSH2-203ENST00000454849 G0S2P27469 103 aa15.62■□□□□ 0.09
MSH2-203ENST00000454849 TIMM17AQ99595 171 aa15.62■□□□□ 0.09
MSH2-203ENST00000454849 LINC00474Q9P2X8 69 aa15.62■□□□□ 0.09
MSH2-203ENST00000454849 PKIGQ9Y2B9 76 aa15.62■□□□□ 0.09
MSH2-203ENST00000454849 LINC01546A6NGU7 62 aa15.61■□□□□ 0.09
MSH2-203ENST00000454849 ERASQ7Z444 233 aa15.61■□□□□ 0.09
MSH2-203ENST00000454849 C7orf33Q8WU49 177 aa15.61■□□□□ 0.09
MSH2-203ENST00000454849 SMCO4Q9NRQ5 59 aa15.61■□□□□ 0.09
MSH2-203ENST00000454849 NDUFA1O15239 70 aa15.6■□□□□ 0.09
MSH2-203ENST00000454849 NPSP0C0P6 89 aa15.6■□□□□ 0.09
MSH2-203ENST00000454849 KIAA0087Q14695 138 aa15.6■□□□□ 0.09
MSH2-203ENST00000454849 C2orf82Q6UX34 121 aa15.6■□□□□ 0.09
MSH2-203ENST00000454849 A0A1W2PNN7 141 aa15.58■□□□□ 0.08
MSH2-203ENST00000454849 PAPPA-AS1Q5QFB9 102 aa15.58■□□□□ 0.08
MSH2-203ENST00000454849 MRPL35Q9NZE8 188 aaKnown RBP15.58■□□□□ 0.08
MSH2-203ENST00000454849 C6orf48Q9UBA6 75 aa15.58■□□□□ 0.08
MSH2-203ENST00000454849 HERC1Q15751 4861 aa15.58■□□□□ 0.08
MSH2-203ENST00000454849 RNF151Q2KHN1 245 aa15.57■□□□□ 0.08
MSH2-203ENST00000454849 SLC7A5P1Q8MH63 180 aa15.57■□□□□ 0.08
MSH2-203ENST00000454849 TOMM7Q9P0U1 55 aa15.57■□□□□ 0.08
MSH2-203ENST00000454849 CDKN2A-AS1Q9UH64 79 aa15.57■□□□□ 0.08
MSH2-203ENST00000454849 C18orf32Q8TCD1 76 aa15.56■□□□□ 0.08
MSH2-203ENST00000454849 URB1-AS1Q96HZ7 61 aa15.56■□□□□ 0.08
MSH2-203ENST00000454849 GEMIN7Q9H840 131 aaKnown RBP15.56■□□□□ 0.08
MSH2-203ENST00000454849 KRTAP29-1A8MX34 341 aaPredicted RBP15.55■□□□□ 0.08
MSH2-203ENST00000454849 PMCHL1Q16048 86 aa15.54■□□□□ 0.08
MSH2-203ENST00000454849 FAM19A3Q7Z5A8 133 aa15.54■□□□□ 0.08
MSH2-203ENST00000454849 F8WDY8 70 aa15.53■□□□□ 0.08
MSH2-203ENST00000454849 HERVK_113P63121 156 aa15.53■□□□□ 0.08
MSH2-203ENST00000454849 GAGE2EQ4V326 116 aa15.53■□□□□ 0.08
MSH2-203ENST00000454849 C9orf116Q5BN46 136 aaPredicted RBP15.53■□□□□ 0.08
MSH2-203ENST00000454849 CBLN2Q8IUK8 224 aa15.53■□□□□ 0.08
MSH2-203ENST00000454849 YPEL4Q96NS1 127 aa15.53■□□□□ 0.08
MSH2-203ENST00000454849 CST9LQ9H4G1 147 aa15.53■□□□□ 0.08
MSH2-203ENST00000454849 GAGE2DQ9UEU5 116 aa15.53■□□□□ 0.08
MSH2-203ENST00000454849 LRP1Q07954 4544 aaKnown RBP15.53■□□□□ 0.08
MSH2-203ENST00000454849 PRSS2P07478 247 aa15.52■□□□□ 0.08
MSH2-203ENST00000454849 Q6ZRP5 223 aa15.52■□□□□ 0.08
MSH2-203ENST00000454849 LINC01561Q8N1V8 128 aa15.52■□□□□ 0.08
MSH2-203ENST00000454849 LINC00614P0C842 121 aa15.51■□□□□ 0.07
MSH2-203ENST00000454849 LINC00469Q8N7U9 141 aa15.51■□□□□ 0.07
MSH2-203ENST00000454849 A0A096LNJ9 63 aa15.5■□□□□ 0.07
MSH2-203ENST00000454849 FAM168BA1KXE4 195 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms