RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 UBE2WQ96B02 151 aa14.37□□□□□ -0.11
C9orf3-208ENST00000451893 CRPP02741 224 aa14.36□□□□□ -0.11
C9orf3-208ENST00000451893 NTM-AS1Q6ZSK4 140 aa14.36□□□□□ -0.11
C9orf3-208ENST00000451893 TMEM243Q9BU79 118 aa14.36□□□□□ -0.11
C9orf3-208ENST00000451893 CSDC2Q9Y534 153 aaKnown RBP14.36□□□□□ -0.11
C9orf3-208ENST00000451893 TRBV6-8A0A0A6YYG3 113 aa14.35□□□□□ -0.11
C9orf3-208ENST00000451893 MRPL52Q86TS9 123 aaKnown RBP14.35□□□□□ -0.11
C9orf3-208ENST00000451893 DEFB104AQ8WTQ1 72 aa14.35□□□□□ -0.11
C9orf3-208ENST00000451893 BAALCQ8WXS3 180 aa14.35□□□□□ -0.11
C9orf3-208ENST00000451893 H0Y8G0 127 aa14.34□□□□□ -0.11
C9orf3-208ENST00000451893 MRPS36P82909 103 aaKnown RBP14.34□□□□□ -0.11
C9orf3-208ENST00000451893 ODF1Q14990 250 aa14.34□□□□□ -0.11
C9orf3-208ENST00000451893 PMVKQ15126 192 aa14.34□□□□□ -0.11
C9orf3-208ENST00000451893 UBE2D4Q9Y2X8 147 aa14.33□□□□□ -0.12
C9orf3-208ENST00000451893 UBE2L6O14933 153 aa14.32□□□□□ -0.12
C9orf3-208ENST00000451893 PKIAP61925 76 aa14.32□□□□□ -0.12
C9orf3-208ENST00000451893 WFDC2Q14508 124 aa14.32□□□□□ -0.12
C9orf3-208ENST00000451893 CHCHD5Q9BSY4 110 aa14.32□□□□□ -0.12
C9orf3-208ENST00000451893 VAMP8Q9BV40 100 aa14.32□□□□□ -0.12
C9orf3-208ENST00000451893 VCX2Q9H322 139 aa14.32□□□□□ -0.12
C9orf3-208ENST00000451893 ZNF25P17030 456 aaPredicted RBP14.31□□□□□ -0.12
C9orf3-208ENST00000451893 DGAT2L7PQ6IED9 249 aa14.31□□□□□ -0.12
C9orf3-208ENST00000451893 C1orf43Q9BWL3 253 aa14.31□□□□□ -0.12
C9orf3-208ENST00000451893 CST9LQ9H4G1 147 aa14.31□□□□□ -0.12
C9orf3-208ENST00000451893 IGLV4-3A0A075B6K6 122 aa14.3□□□□□ -0.12
C9orf3-208ENST00000451893 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.3□□□□□ -0.12
C9orf3-208ENST00000451893 IGKV2-29A2NJV5 120 aaPredicted RBP14.3□□□□□ -0.12
C9orf3-208ENST00000451893 HSBP1L1C9JCN9 74 aa14.3□□□□□ -0.12
C9orf3-208ENST00000451893 F8VRH5 84 aa14.3□□□□□ -0.12
C9orf3-208ENST00000451893 DPM2O94777 84 aa14.3□□□□□ -0.12
C9orf3-208ENST00000451893 PLNP26678 52 aa14.3□□□□□ -0.12
C9orf3-208ENST00000451893 CHTOPQ9Y3Y2 248 aaKnown RBP14.3□□□□□ -0.12
C9orf3-208ENST00000451893 ANGP03950 147 aaKnown RBP14.29□□□□□ -0.12
C9orf3-208ENST00000451893 TMEM101Q96IK0 257 aa14.29□□□□□ -0.12
C9orf3-208ENST00000451893 AMELXQ99217 191 aa14.29□□□□□ -0.12
C9orf3-208ENST00000451893 IGKCP01834 107 aa14.28□□□□□ -0.12
C9orf3-208ENST00000451893 FGF6P10767 208 aa14.28□□□□□ -0.12
C9orf3-208ENST00000451893 AMMECR1LQ6DCA0 310 aa14.28□□□□□ -0.12
C9orf3-208ENST00000451893 C14orf177Q52M58 125 aa14.27□□□□□ -0.13
C9orf3-208ENST00000451893 MRPL35Q9NZE8 188 aaKnown RBP14.27□□□□□ -0.13
C9orf3-208ENST00000451893 OR5A1Q8NGJ0 315 aa14.26□□□□□ -0.13
C9orf3-208ENST00000451893 C2orf88Q9BSF0 95 aa14.26□□□□□ -0.13
C9orf3-208ENST00000451893 MPV17L2Q567V2 206 aa14.25□□□□□ -0.13
C9orf3-208ENST00000451893 PMCHL2Q9BQD1 86 aa14.25□□□□□ -0.13
C9orf3-208ENST00000451893 FAM30AQ9NZY2 134 aa14.25□□□□□ -0.13
C9orf3-208ENST00000451893 A0A1B0GUV1 79 aa14.24□□□□□ -0.13
C9orf3-208ENST00000451893 ATOH7Q8N100 152 aa14.24□□□□□ -0.13
C9orf3-208ENST00000451893 ZNF664Q8N3J9 261 aa14.24□□□□□ -0.13
C9orf3-208ENST00000451893 TSTD3H0UI37 97 aa14.23□□□□□ -0.13
C9orf3-208ENST00000451893 FAM104AQ969W3 186 aa14.23□□□□□ -0.13
C9orf3-208ENST00000451893 OPRPNQ99935 248 aaPredicted RBP14.23□□□□□ -0.13
C9orf3-208ENST00000451893 CDC42SE2Q9NRR3 84 aa14.23□□□□□ -0.13
C9orf3-208ENST00000451893 PLA2G1BP04054 148 aaKnown RBP14.22□□□□□ -0.13
C9orf3-208ENST00000451893 GAGE6Q13070 117 aa14.22□□□□□ -0.13
C9orf3-208ENST00000451893 LINC01620Q4KN68 170 aa14.22□□□□□ -0.13
C9orf3-208ENST00000451893 SPATA45Q537H7 98 aa14.22□□□□□ -0.13
C9orf3-208ENST00000451893 PAM16Q9Y3D7 125 aa14.22□□□□□ -0.13
C9orf3-208ENST00000451893 SEC11AP67812 179 aa14.21□□□□□ -0.13
C9orf3-208ENST00000451893 IGLC3P0DOY3 106 aa14.2□□□□□ -0.14
C9orf3-208ENST00000451893 MIAQ16674 131 aa14.2□□□□□ -0.14
C9orf3-208ENST00000451893 CLPSL2Q6UWE3 100 aa14.2□□□□□ -0.14
C9orf3-208ENST00000451893 Q6ZUT4 128 aa14.2□□□□□ -0.14
C9orf3-208ENST00000451893 ENHOQ6UWT2 76 aa14.19□□□□□ -0.14
C9orf3-208ENST00000451893 FAM19A3Q7Z5A8 133 aa14.19□□□□□ -0.14
C9orf3-208ENST00000451893 IGLV4-69A0A075B6H9 119 aa14.18□□□□□ -0.14
C9orf3-208ENST00000451893 LINC00528Q8N1L1 170 aa14.18□□□□□ -0.14
C9orf3-208ENST00000451893 TINCRA0A1B0GVN0 87 aa14.17□□□□□ -0.14
C9orf3-208ENST00000451893 hDV102S1A0JD36 115 aa14.17□□□□□ -0.14
C9orf3-208ENST00000451893 CCL25O15444 150 aa14.16□□□□□ -0.14
C9orf3-208ENST00000451893 UBE2D1P51668 147 aa14.16□□□□□ -0.14
C9orf3-208ENST00000451893 RBX1P62877 108 aa14.16□□□□□ -0.14
C9orf3-208ENST00000451893 ZC2HC1BQ5TFG8 222 aa14.16□□□□□ -0.14
C9orf3-208ENST00000451893 Q6ZSA8 131 aa14.16□□□□□ -0.14
C9orf3-208ENST00000451893 LINC00269Q8N2A0 174 aa14.16□□□□□ -0.14
C9orf3-208ENST00000451893 C11orf86A6NJI1 115 aa14.15□□□□□ -0.14
C9orf3-208ENST00000451893 HERVK_113P61574 105 aa14.15□□□□□ -0.14
C9orf3-208ENST00000451893 MAJINQ3KP22 176 aa14.15□□□□□ -0.14
C9orf3-208ENST00000451893 USP17L23D6RBM5 183 aa14.14□□□□□ -0.15
C9orf3-208ENST00000451893 STPG4Q8N801 248 aa14.14□□□□□ -0.15
C9orf3-208ENST00000451893 A0A0J9YXV3 536 aa14.13□□□□□ -0.15
C9orf3-208ENST00000451893 SCXQ7RTU7 201 aa14.13□□□□□ -0.15
C9orf3-208ENST00000451893 CHAC1Q9BUX1 264 aa14.13□□□□□ -0.15
C9orf3-208ENST00000451893 J3QL48 77 aa14.12□□□□□ -0.15
C9orf3-208ENST00000451893 HERVK_113P63121 156 aa14.12□□□□□ -0.15
C9orf3-208ENST00000451893 MIEN1Q9BRT3 115 aa14.12□□□□□ -0.15
C9orf3-208ENST00000451893 PRO1933Q9H354 126 aa14.12□□□□□ -0.15
C9orf3-208ENST00000451893 GEMIN7Q9H840 131 aaKnown RBP14.12□□□□□ -0.15
C9orf3-208ENST00000451893 UQCR10Q9UDW1 63 aa14.12□□□□□ -0.15
C9orf3-208ENST00000451893 IGLV4-60A0A075B6I1 120 aa14.11□□□□□ -0.15
C9orf3-208ENST00000451893 REG3AQ06141 175 aa14.11□□□□□ -0.15
C9orf3-208ENST00000451893 RNASE13Q5GAN3 156 aaKnown RBP14.11□□□□□ -0.15
C9orf3-208ENST00000451893 IGLV10-54A0A075B6I4 117 aa14.1□□□□□ -0.15
C9orf3-208ENST00000451893 E9PLD3 99 aa14.1□□□□□ -0.15
C9orf3-208ENST00000451893 ANKRD39Q53RE8 183 aa14.1□□□□□ -0.15
C9orf3-208ENST00000451893 TMEM170BQ5T4T1 132 aa14.1□□□□□ -0.15
C9orf3-208ENST00000451893 FLG2Q5D862 2391 aaPredicted RBP14.1□□□□□ -0.15
C9orf3-208ENST00000451893 IGLV5-45A0A087WSX0 123 aa14.09□□□□□ -0.15
C9orf3-208ENST00000451893 H3BRM9 83 aa14.09□□□□□ -0.15
C9orf3-208ENST00000451893 COX8AP10176 69 aa14.09□□□□□ -0.15
C9orf3-208ENST00000451893 ZNF22P17026 224 aaPredicted RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms