RNA–Protein interactions for RNA: ENST00000449918.1

CLTCL1-203, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-203ENST00000449918 IFITM10A6NMD0 228 aa10.86□□□□□ -0.67
CLTCL1-203ENST00000449918 IFI27P40305 119 aaPredicted RBP10.86□□□□□ -0.67
CLTCL1-203ENST00000449918 SPAG11BQ08648 103 aa10.86□□□□□ -0.67
CLTCL1-203ENST00000449918 FAM104AQ969W3 186 aa10.86□□□□□ -0.67
CLTCL1-203ENST00000449918 OPRPNQ99935 248 aaPredicted RBP10.86□□□□□ -0.67
CLTCL1-203ENST00000449918 IGHV3OR16-9A0A0B4J2B5 98 aa10.85□□□□□ -0.67
CLTCL1-203ENST00000449918 F8WDY8 70 aa10.85□□□□□ -0.67
CLTCL1-203ENST00000449918 PRSS47A8MTI9 375 aa10.84□□□□□ -0.67
CLTCL1-203ENST00000449918 RNF151Q2KHN1 245 aa10.84□□□□□ -0.67
CLTCL1-203ENST00000449918 ORAOV1Q8WV07 137 aa10.84□□□□□ -0.67
CLTCL1-203ENST00000449918 MAP1LC3AQ9H492 121 aa10.84□□□□□ -0.67
CLTCL1-203ENST00000449918 PYGO1Q9Y3Y4 419 aa10.84□□□□□ -0.67
CLTCL1-203ENST00000449918 FAT3Q8TDW7 4589 aa10.84□□□□□ -0.67
CLTCL1-203ENST00000449918 PKHD1L1Q86WI1 4243 aa10.83□□□□□ -0.68
CLTCL1-203ENST00000449918 LOC389332A0A1B0GUA5 103 aa10.83□□□□□ -0.68
CLTCL1-203ENST00000449918 MT1HL1P0DM35 61 aa10.83□□□□□ -0.68
CLTCL1-203ENST00000449918 PLA2G2DQ9UNK4 145 aa10.83□□□□□ -0.68
CLTCL1-203ENST00000449918 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.82□□□□□ -0.68
CLTCL1-203ENST00000449918 Q6ZRP5 223 aa10.82□□□□□ -0.68
CLTCL1-203ENST00000449918 TGIF2-C20orf24A0A0A6YYL0 155 aa10.81□□□□□ -0.68
CLTCL1-203ENST00000449918 RPL18AQ02543 176 aaKnown RBP10.81□□□□□ -0.68
CLTCL1-203ENST00000449918 Q8N8P6 123 aa10.81□□□□□ -0.68
CLTCL1-203ENST00000449918 TMEM141Q96I45 108 aa10.81□□□□□ -0.68
CLTCL1-203ENST00000449918 MRPL35Q9NZE8 188 aaKnown RBP10.81□□□□□ -0.68
CLTCL1-203ENST00000449918 IGLV4-3A0A075B6K6 122 aa10.8□□□□□ -0.68
CLTCL1-203ENST00000449918 A0A1W2PNN7 141 aa10.8□□□□□ -0.68
CLTCL1-203ENST00000449918 NDUFA1O15239 70 aa10.8□□□□□ -0.68
CLTCL1-203ENST00000449918 CLLU1Q5K131 121 aa10.8□□□□□ -0.68
CLTCL1-203ENST00000449918 SPINK6Q6UWN8 80 aa10.8□□□□□ -0.68
CLTCL1-203ENST00000449918 IMMP2LQ96T52 175 aa10.8□□□□□ -0.68
CLTCL1-203ENST00000449918 A0A0J9YXV3 536 aa10.79□□□□□ -0.68
CLTCL1-203ENST00000449918 C9orf116Q5BN46 136 aaPredicted RBP10.79□□□□□ -0.68
CLTCL1-203ENST00000449918 TEX43Q6ZNM6 134 aa10.79□□□□□ -0.68
CLTCL1-203ENST00000449918 CYSLTR1Q9Y271 337 aa10.79□□□□□ -0.68
CLTCL1-203ENST00000449918 A0A087WZ39 114 aa10.78□□□□□ -0.68
CLTCL1-203ENST00000449918 K7EMI3 77 aa10.78□□□□□ -0.68
CLTCL1-203ENST00000449918 ORMDL2Q53FV1 153 aa10.78□□□□□ -0.68
CLTCL1-203ENST00000449918 LINC00242Q5T6M2 205 aa10.78□□□□□ -0.68
CLTCL1-203ENST00000449918 Q6ZN92 141 aa10.78□□□□□ -0.68
CLTCL1-203ENST00000449918 C2orf88Q9BSF0 95 aa10.78□□□□□ -0.68
CLTCL1-203ENST00000449918 CTDSP1Q9GZU7 261 aa10.78□□□□□ -0.68
CLTCL1-203ENST00000449918 REG3GQ6UW15 175 aa10.77□□□□□ -0.69
CLTCL1-203ENST00000449918 C2orf66Q6UXQ4 117 aa10.77□□□□□ -0.69
CLTCL1-203ENST00000449918 LINC01600Q96MT4 127 aa10.77□□□□□ -0.69
CLTCL1-203ENST00000449918 G0S2P27469 103 aa10.76□□□□□ -0.69
CLTCL1-203ENST00000449918 UQCC3Q6UW78 93 aa10.76□□□□□ -0.69
CLTCL1-203ENST00000449918 VCX2Q9H322 139 aa10.76□□□□□ -0.69
CLTCL1-203ENST00000449918 NXT2Q9NPJ8 142 aaKnown RBP10.76□□□□□ -0.69
CLTCL1-203ENST00000449918 NPSP0C0P6 89 aa10.75□□□□□ -0.69
CLTCL1-203ENST00000449918 UBE2D1P51668 147 aa10.75□□□□□ -0.69
CLTCL1-203ENST00000449918 SRSF9Q13242 221 aaKnown RBP eCLIP10.75□□□□□ -0.69
CLTCL1-203ENST00000449918 UNQ6190/PRO20217Q6UXQ8 127 aa10.75□□□□□ -0.69
CLTCL1-203ENST00000449918 TLX1NBP0CAT3 122 aa10.74□□□□□ -0.69
CLTCL1-203ENST00000449918 C10orf25Q5T742 122 aa10.74□□□□□ -0.69
CLTCL1-203ENST00000449918 LINC01561Q8N1V8 128 aa10.74□□□□□ -0.69
CLTCL1-203ENST00000449918 MT-ND6P03923 174 aa10.73□□□□□ -0.69
CLTCL1-203ENST00000449918 KIAA0087Q14695 138 aa10.73□□□□□ -0.69
CLTCL1-203ENST00000449918 AMELXQ99217 191 aa10.73□□□□□ -0.69
CLTCL1-203ENST00000449918 C6orf48Q9UBA6 75 aa10.73□□□□□ -0.69
CLTCL1-203ENST00000449918 TMEM218A2RU14 115 aa10.72□□□□□ -0.69
CLTCL1-203ENST00000449918 IGIPA6NJ69 53 aa10.72□□□□□ -0.69
CLTCL1-203ENST00000449918 PAPPA-AS1Q5QFB9 102 aa10.72□□□□□ -0.69
CLTCL1-203ENST00000449918 HMCN2Q8NDA2 5059 aa10.72□□□□□ -0.69
CLTCL1-203ENST00000449918 TRAV9-1A0A075B6T8 112 aa10.71□□□□□ -0.69
CLTCL1-203ENST00000449918 TRBV30A0A0K0K1B3 111 aa10.71□□□□□ -0.69
CLTCL1-203ENST00000449918 PHF5AQ7RTV0 110 aaKnown RBP10.71□□□□□ -0.69
CLTCL1-203ENST00000449918 PACRGQ96M98 296 aaPredicted RBP10.71□□□□□ -0.69
CLTCL1-203ENST00000449918 PSORS1C2Q9UIG4 136 aa10.71□□□□□ -0.69
CLTCL1-203ENST00000449918 PRSS2P07478 247 aa10.7□□□□□ -0.7
CLTCL1-203ENST00000449918 ADCYAP1P18509 176 aa10.7□□□□□ -0.7
CLTCL1-203ENST00000449918 GAGE2EQ4V326 116 aa10.7□□□□□ -0.7
CLTCL1-203ENST00000449918 GAGE2DQ9UEU5 116 aa10.7□□□□□ -0.7
CLTCL1-203ENST00000449918 S100PP25815 95 aa10.69□□□□□ -0.7
CLTCL1-203ENST00000449918 SEC11AP67812 179 aa10.69□□□□□ -0.7
CLTCL1-203ENST00000449918 ZC2HC1BQ5TFG8 222 aa10.69□□□□□ -0.7
CLTCL1-203ENST00000449918 LINC00173Q6ZV60 143 aa10.69□□□□□ -0.7
CLTCL1-203ENST00000449918 KIAA1644Q3SXP7 199 aa10.68□□□□□ -0.7
CLTCL1-203ENST00000449918 C1orf137Q5JT78 98 aa10.68□□□□□ -0.7
CLTCL1-203ENST00000449918 C2orf82Q6UX34 121 aa10.68□□□□□ -0.7
CLTCL1-203ENST00000449918 FAM19A3Q7Z5A8 133 aa10.68□□□□□ -0.7
CLTCL1-203ENST00000449918 SEC11CQ9BY50 192 aa10.68□□□□□ -0.7
CLTCL1-203ENST00000449918 FAM168BA1KXE4 195 aa10.67□□□□□ -0.7
CLTCL1-203ENST00000449918 NDUFC2-KCTD14E9PQ53 114 aa10.67□□□□□ -0.7
CLTCL1-203ENST00000449918 CKS1BP61024 79 aa10.67□□□□□ -0.7
CLTCL1-203ENST00000449918 HERVK_113P63121 156 aa10.67□□□□□ -0.7
CLTCL1-203ENST00000449918 IFITM2Q01629 132 aa10.67□□□□□ -0.7
CLTCL1-203ENST00000449918 TOMM6Q96B49 74 aa10.67□□□□□ -0.7
CLTCL1-203ENST00000449918 TIMM17AQ99595 171 aa10.67□□□□□ -0.7
CLTCL1-203ENST00000449918 KRTAP10-8P60410 259 aa10.66□□□□□ -0.7
CLTCL1-203ENST00000449918 C6orf226Q5I0X4 101 aa10.66□□□□□ -0.7
CLTCL1-203ENST00000449918 FAM19A5Q7Z5A7 132 aaPredicted RBP10.66□□□□□ -0.7
CLTCL1-203ENST00000449918 GNB1LQ9BYB4 327 aa10.66□□□□□ -0.7
CLTCL1-203ENST00000449918 GEMIN7Q9H840 131 aaKnown RBP10.66□□□□□ -0.7
CLTCL1-203ENST00000449918 TOMM7Q9P0U1 55 aa10.66□□□□□ -0.7
CLTCL1-203ENST00000449918 ERASQ7Z444 233 aa10.65□□□□□ -0.7
CLTCL1-203ENST00000449918 ALKBH7Q9BT30 221 aaPredicted RBP10.65□□□□□ -0.7
CLTCL1-203ENST00000449918 LINC01549A6NIU2 74 aa10.64□□□□□ -0.71
CLTCL1-203ENST00000449918 Q8IZM0 81 aa10.64□□□□□ -0.71
CLTCL1-203ENST00000449918 SCGB3A1Q96QR1 104 aa10.64□□□□□ -0.71
CLTCL1-203ENST00000449918 COX19Q49B96 90 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms