RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 PET117Q6UWS5 81 aa9.75□□□□□ -0.85
SHANK2-210ENST00000449116 Q6ZRN7 208 aaPredicted RBP9.75□□□□□ -0.85
SHANK2-210ENST00000449116 SPATA12Q7Z6I5 190 aa9.75□□□□□ -0.85
SHANK2-210ENST00000449116 DNAH10Q8IVF4 4471 aa9.75□□□□□ -0.85
SHANK2-210ENST00000449116 IGLV4-69A0A075B6H9 119 aa9.74□□□□□ -0.85
SHANK2-210ENST00000449116 TINCRA0A1B0GVN0 87 aa9.74□□□□□ -0.85
SHANK2-210ENST00000449116 F8VRH5 84 aa9.74□□□□□ -0.85
SHANK2-210ENST00000449116 PSCAO43653 123 aa9.74□□□□□ -0.85
SHANK2-210ENST00000449116 IGLC3P0DOY3 106 aa9.74□□□□□ -0.85
SHANK2-210ENST00000449116 HERVK_113P63121 156 aa9.74□□□□□ -0.85
SHANK2-210ENST00000449116 COX6A2Q02221 97 aa9.74□□□□□ -0.85
SHANK2-210ENST00000449116 FOXI1Q12951 378 aa9.74□□□□□ -0.85
SHANK2-210ENST00000449116 GEMIN7Q9H840 131 aaKnown RBP9.74□□□□□ -0.85
SHANK2-210ENST00000449116 MRPL35Q9NZE8 188 aaKnown RBP9.74□□□□□ -0.85
SHANK2-210ENST00000449116 IGHV3OR16-9A0A0B4J2B5 98 aa9.73□□□□□ -0.85
SHANK2-210ENST00000449116 CHAC1Q9BUX1 264 aa9.73□□□□□ -0.85
SHANK2-210ENST00000449116 IGLV5-45A0A087WSX0 123 aa9.71□□□□□ -0.86
SHANK2-210ENST00000449116 C11orf86A6NJI1 115 aa9.71□□□□□ -0.86
SHANK2-210ENST00000449116 COX7A2LO14548 114 aa9.71□□□□□ -0.86
SHANK2-210ENST00000449116 LINC01545Q5VT33 79 aa9.71□□□□□ -0.86
SHANK2-210ENST00000449116 MAPKAPK5-AS1Q8N8E1 139 aa9.71□□□□□ -0.86
SHANK2-210ENST00000449116 OR10D4PQ8NGN7 298 aa9.71□□□□□ -0.86
SHANK2-210ENST00000449116 DNAH17Q9UFH2 4485 aa9.71□□□□□ -0.86
SHANK2-210ENST00000449116 C20orf202A1L168 122 aa9.7□□□□□ -0.86
SHANK2-210ENST00000449116 C5orf38Q86SI9 138 aa9.7□□□□□ -0.86
SHANK2-210ENST00000449116 LINC00469Q8N7U9 141 aa9.7□□□□□ -0.86
SHANK2-210ENST00000449116 PMCHL2Q9BQD1 86 aa9.7□□□□□ -0.86
SHANK2-210ENST00000449116 A0A087WZ39 114 aa9.69□□□□□ -0.86
SHANK2-210ENST00000449116 RTL8CO15255 209 aa9.69□□□□□ -0.86
SHANK2-210ENST00000449116 DPM2O94777 84 aa9.69□□□□□ -0.86
SHANK2-210ENST00000449116 MALP21145 153 aa9.69□□□□□ -0.86
SHANK2-210ENST00000449116 PLNP26678 52 aa9.69□□□□□ -0.86
SHANK2-210ENST00000449116 CDKN2A-AS1Q9UH64 79 aa9.69□□□□□ -0.86
SHANK2-210ENST00000449116 EPPK1P58107 5090 aaKnown RBP9.69□□□□□ -0.86
SHANK2-210ENST00000449116 FRAS1Q86XX4 4008 aa9.68□□□□□ -0.86
SHANK2-210ENST00000449116 H3BRM9 83 aa9.68□□□□□ -0.86
SHANK2-210ENST00000449116 IGKCP01834 107 aa9.68□□□□□ -0.86
SHANK2-210ENST00000449116 ZNF22P17026 224 aaPredicted RBP9.68□□□□□ -0.86
SHANK2-210ENST00000449116 LINC01561Q8N1V8 128 aa9.68□□□□□ -0.86
SHANK2-210ENST00000449116 BIRC6Q9NR09 4857 aa9.68□□□□□ -0.86
SHANK2-210ENST00000449116 APOMO95445 188 aa9.67□□□□□ -0.86
SHANK2-210ENST00000449116 TMEM170BQ5T4T1 132 aa9.67□□□□□ -0.86
SHANK2-210ENST00000449116 CFAP161Q6P656 301 aa9.67□□□□□ -0.86
SHANK2-210ENST00000449116 IGHV1-58A0A0C4DH39 117 aa9.66□□□□□ -0.86
SHANK2-210ENST00000449116 LRCOL1A6NCL2 159 aa9.66□□□□□ -0.86
SHANK2-210ENST00000449116 USP17L23D6RBM5 183 aa9.66□□□□□ -0.86
SHANK2-210ENST00000449116 AKR1D1P51857 326 aa9.66□□□□□ -0.86
SHANK2-210ENST00000449116 LECT2O14960 151 aa9.65□□□□□ -0.86
SHANK2-210ENST00000449116 C15orf56Q8N910 161 aa9.65□□□□□ -0.86
SHANK2-210ENST00000449116 IGHV3-64A0A075B6Q5 118 aa9.64□□□□□ -0.87
SHANK2-210ENST00000449116 A0A087WTM6 91 aa9.64□□□□□ -0.87
SHANK2-210ENST00000449116 SMIM1B2RUZ4 78 aa9.64□□□□□ -0.87
SHANK2-210ENST00000449116 SPINK8P0C7L1 97 aa9.64□□□□□ -0.87
SHANK2-210ENST00000449116 TNP2Q05952 138 aa9.64□□□□□ -0.87
SHANK2-210ENST00000449116 WFDC2Q14508 124 aa9.64□□□□□ -0.87
SHANK2-210ENST00000449116 FAT2Q9NYQ8 4349 aa9.64□□□□□ -0.87
SHANK2-210ENST00000449116 TMEM223A0PJW6 202 aa9.63□□□□□ -0.87
SHANK2-210ENST00000449116 SCGB1D1O95968 90 aa9.63□□□□□ -0.87
SHANK2-210ENST00000449116 C14orf177Q52M58 125 aa9.63□□□□□ -0.87
SHANK2-210ENST00000449116 LINC00336Q6ZUF6 198 aa9.63□□□□□ -0.87
SHANK2-210ENST00000449116 ORAOV1Q8WV07 137 aa9.63□□□□□ -0.87
SHANK2-210ENST00000449116 GVQW2A0A096LPI5 108 aaPredicted RBP9.62□□□□□ -0.87
SHANK2-210ENST00000449116 hDV102S1A0JD36 115 aa9.61□□□□□ -0.87
SHANK2-210ENST00000449116 EREGO14944 169 aa9.61□□□□□ -0.87
SHANK2-210ENST00000449116 HERVK_113P61574 105 aa9.61□□□□□ -0.87
SHANK2-210ENST00000449116 SPAG11BQ08648 103 aa9.61□□□□□ -0.87
SHANK2-210ENST00000449116 HIGD2BQ4VC39 106 aa9.61□□□□□ -0.87
SHANK2-210ENST00000449116 IGLV5-39A0A0G2JS06 123 aa9.6□□□□□ -0.87
SHANK2-210ENST00000449116 ZNF561-AS1K7EIQ3 104 aa9.6□□□□□ -0.87
SHANK2-210ENST00000449116 JOSD1Q15040 202 aaPredicted RBP9.6□□□□□ -0.87
SHANK2-210ENST00000449116 ATOH7Q8N100 152 aa9.6□□□□□ -0.87
SHANK2-210ENST00000449116 Q8N814 137 aa9.6□□□□□ -0.87
SHANK2-210ENST00000449116 PRSS2P07478 247 aa9.59□□□□□ -0.87
SHANK2-210ENST00000449116 Q8IZM0 81 aa9.59□□□□□ -0.87
SHANK2-210ENST00000449116 COX7B2Q8TF08 81 aa9.59□□□□□ -0.87
SHANK2-210ENST00000449116 TOMM7Q9P0U1 55 aa9.59□□□□□ -0.87
SHANK2-210ENST00000449116 KIAA0087Q14695 138 aa9.58□□□□□ -0.88
SHANK2-210ENST00000449116 STPG4Q8N801 248 aa9.58□□□□□ -0.88
SHANK2-210ENST00000449116 C2orf48Q96LS8 159 aa9.58□□□□□ -0.88
SHANK2-210ENST00000449116 C6orf226Q5I0X4 101 aa9.57□□□□□ -0.88
SHANK2-210ENST00000449116 PYY3Q5JQD4 70 aa9.57□□□□□ -0.88
SHANK2-210ENST00000449116 NTN5Q8WTR8 489 aaPredicted RBP9.57□□□□□ -0.88
SHANK2-210ENST00000449116 LINC00526Q96FQ7 95 aa9.57□□□□□ -0.88
SHANK2-210ENST00000449116 DNAH11Q96DT5 4516 aa9.57□□□□□ -0.88
SHANK2-210ENST00000449116 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.56□□□□□ -0.88
SHANK2-210ENST00000449116 E9PLD3 99 aa9.56□□□□□ -0.88
SHANK2-210ENST00000449116 LEPROTO15243 131 aa9.56□□□□□ -0.88
SHANK2-210ENST00000449116 LOC105371267A0A1B0GV96 52 aa9.55□□□□□ -0.88
SHANK2-210ENST00000449116 HSBP1L1C9JCN9 74 aa9.55□□□□□ -0.88
SHANK2-210ENST00000449116 F8WDY8 70 aa9.55□□□□□ -0.88
SHANK2-210ENST00000449116 CXCL5P42830 114 aa9.55□□□□□ -0.88
SHANK2-210ENST00000449116 PLEKHB2Q96CS7 222 aa9.55□□□□□ -0.88
SHANK2-210ENST00000449116 CAMK2N2Q96S95 79 aa9.55□□□□□ -0.88
SHANK2-210ENST00000449116 NDUFA1O15239 70 aa9.54□□□□□ -0.88
SHANK2-210ENST00000449116 SLPIP03973 132 aa9.54□□□□□ -0.88
SHANK2-210ENST00000449116 CKS1BP61024 79 aa9.54□□□□□ -0.88
SHANK2-210ENST00000449116 CNBPP62633 177 aaKnown RBP9.54□□□□□ -0.88
SHANK2-210ENST00000449116 MAJINQ3KP22 176 aa9.54□□□□□ -0.88
SHANK2-210ENST00000449116 J3QQQ9 107 aa9.53□□□□□ -0.88
SHANK2-210ENST00000449116 SYCNQ0VAF6 134 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms