RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 LYPD5Q6UWN5 251 aa6.69□□□□□ -1.34
SYNPO2-204ENST00000448416 RBM3P98179 157 aaKnown RBP6.69□□□□□ -1.34
SYNPO2-204ENST00000448416 BRK1Q8WUW1 75 aa6.69□□□□□ -1.34
SYNPO2-204ENST00000448416 AKAP13Q12802 2813 aa6.69□□□□□ -1.34
SYNPO2-204ENST00000448416 F8WEM9 126 aa6.68□□□□□ -1.34
SYNPO2-204ENST00000448416 RNASE1P07998 156 aaKnown RBP6.68□□□□□ -1.34
SYNPO2-204ENST00000448416 RMI2Q96E14 147 aa6.68□□□□□ -1.34
SYNPO2-204ENST00000448416 CDC42SE2Q9NRR3 84 aa6.68□□□□□ -1.34
SYNPO2-204ENST00000448416 A0A0U1RQV1 116 aa6.68□□□□□ -1.34
SYNPO2-204ENST00000448416 IGLV1-40P01703 118 aa6.67□□□□□ -1.34
SYNPO2-204ENST00000448416 KLKP1Q107X0 134 aa6.67□□□□□ -1.34
SYNPO2-204ENST00000448416 NBASA2RRP1 2371 aa6.67□□□□□ -1.34
SYNPO2-204ENST00000448416 H3BUX3 64 aa6.67□□□□□ -1.34
SYNPO2-204ENST00000448416 CFHR3Q02985 330 aa6.67□□□□□ -1.34
SYNPO2-204ENST00000448416 C11orf72Q8NBR9 251 aa6.67□□□□□ -1.34
SYNPO2-204ENST00000448416 ZFHX3Q15911 3703 aa6.67□□□□□ -1.34
SYNPO2-204ENST00000448416 NBL1P41271 181 aa6.67□□□□□ -1.34
SYNPO2-204ENST00000448416 LMO4P61968 165 aa6.67□□□□□ -1.34
SYNPO2-204ENST00000448416 BPESC1Q9GZL8 116 aa6.67□□□□□ -1.34
SYNPO2-204ENST00000448416 LINC00474Q9P2X8 69 aa6.67□□□□□ -1.34
SYNPO2-204ENST00000448416 V9GYY9 64 aa6.67□□□□□ -1.34
SYNPO2-204ENST00000448416 IGKV3OR2-268A0A0C4DH90 116 aa6.66□□□□□ -1.34
SYNPO2-204ENST00000448416 TMEM256-PLSCR3K7ERE1 68 aa6.66□□□□□ -1.34
SYNPO2-204ENST00000448416 C2CD3Q4AC94 2353 aa6.66□□□□□ -1.34
SYNPO2-204ENST00000448416 BCE1O60756 84 aa6.66□□□□□ -1.34
SYNPO2-204ENST00000448416 AVPP01185 164 aa6.66□□□□□ -1.34
SYNPO2-204ENST00000448416 C1orf195Q5TG92 126 aa6.66□□□□□ -1.34
SYNPO2-204ENST00000448416 CCL21O00585 134 aa6.66□□□□□ -1.34
SYNPO2-204ENST00000448416 DEFB131AP59861 70 aa6.66□□□□□ -1.34
SYNPO2-204ENST00000448416 Q6ZTI0 123 aa6.66□□□□□ -1.34
SYNPO2-204ENST00000448416 TRBV7-6A0A0J9YX20 115 aa6.65□□□□□ -1.34
SYNPO2-204ENST00000448416 UBE2L6O14933 153 aa6.65□□□□□ -1.34
SYNPO2-204ENST00000448416 SEC61GP60059 68 aa6.65□□□□□ -1.34
SYNPO2-204ENST00000448416 NTM-AS1Q6ZSK4 140 aa6.65□□□□□ -1.34
SYNPO2-204ENST00000448416 HAMPP81172 84 aa6.65□□□□□ -1.34
SYNPO2-204ENST00000448416 TRBV6-4A0A1B0GX49 114 aa6.65□□□□□ -1.35
SYNPO2-204ENST00000448416 IBA57-AS1B1ANH7 110 aa6.64□□□□□ -1.35
SYNPO2-204ENST00000448416 HRNRQ86YZ3 2850 aaPredicted RBP6.64□□□□□ -1.35
SYNPO2-204ENST00000448416 TRAV10A0A0B4J240 114 aa6.64□□□□□ -1.35
SYNPO2-204ENST00000448416 FBXL19-AS1Q494R0 122 aa6.64□□□□□ -1.35
SYNPO2-204ENST00000448416 Q8N814 137 aa6.64□□□□□ -1.35
SYNPO2-204ENST00000448416 CDSNQ15517 529 aa6.63□□□□□ -1.35
SYNPO2-204ENST00000448416 BSNQ9UPA5 3926 aa6.63□□□□□ -1.35
SYNPO2-204ENST00000448416 A6NDX4 124 aa6.63□□□□□ -1.35
SYNPO2-204ENST00000448416 K7EQD1 137 aa6.63□□□□□ -1.35
SYNPO2-204ENST00000448416 LINC00167Q96N53 147 aa6.62□□□□□ -1.35
SYNPO2-204ENST00000448416 TLN1Q9Y490 2541 aaKnown RBP6.62□□□□□ -1.35
SYNPO2-204ENST00000448416 TRGV1A0A0A0MS02 117 aa6.62□□□□□ -1.35
SYNPO2-204ENST00000448416 LY6G6DO95868 133 aa6.62□□□□□ -1.35
SYNPO2-204ENST00000448416 LINC01547P58512 204 aaPredicted RBP6.62□□□□□ -1.35
SYNPO2-204ENST00000448416 C10orf99Q6UWK7 81 aa6.62□□□□□ -1.35
SYNPO2-204ENST00000448416 NDUFC1O43677 76 aa6.62□□□□□ -1.35
SYNPO2-204ENST00000448416 IGHV4-38-2P0DP08 117 aa6.62□□□□□ -1.35
SYNPO2-204ENST00000448416 LINC00482Q8N8I6 264 aa6.62□□□□□ -1.35
SYNPO2-204ENST00000448416 C11orf68Q9H3H3 251 aaKnown RBP6.62□□□□□ -1.35
SYNPO2-204ENST00000448416 OTOGLQ3ZCN5 2332 aa6.61□□□□□ -1.35
SYNPO2-204ENST00000448416 CELSR1Q9NYQ6 3014 aa6.61□□□□□ -1.35
SYNPO2-204ENST00000448416 MPLKIPQ8TAP9 179 aa6.61□□□□□ -1.35
SYNPO2-204ENST00000448416 TMEM89A2RUT3 159 aa6.6□□□□□ -1.35
SYNPO2-204ENST00000448416 TRBV10-1A0A0K0K1A3 114 aa6.6□□□□□ -1.35
SYNPO2-204ENST00000448416 C6orf226Q5I0X4 101 aa6.6□□□□□ -1.35
SYNPO2-204ENST00000448416 ATP5EP56381 51 aaPredicted RBP6.6□□□□□ -1.35
SYNPO2-204ENST00000448416 A0A1W2PPR1 153 aa6.59□□□□□ -1.35
SYNPO2-204ENST00000448416 LAMTOR3Q9UHA4 124 aa6.59□□□□□ -1.35
SYNPO2-204ENST00000448416 INSP01308 110 aa6.59□□□□□ -1.35
SYNPO2-204ENST00000448416 PRR3P79522 188 aaKnown RBP6.59□□□□□ -1.35
SYNPO2-204ENST00000448416 Q6ZQT0 140 aa6.59□□□□□ -1.35
SYNPO2-204ENST00000448416 MIFP14174 115 aa6.59□□□□□ -1.35
SYNPO2-204ENST00000448416 Q6ZVQ6 151 aa6.59□□□□□ -1.35
SYNPO2-204ENST00000448416 A0A096LNT2 108 aa6.59□□□□□ -1.36
SYNPO2-204ENST00000448416 Q8N3U1 123 aa6.59□□□□□ -1.36
SYNPO2-204ENST00000448416 TM2D3Q9BRN9 247 aa6.59□□□□□ -1.36
SYNPO2-204ENST00000448416 NOTCH3Q9UM47 2321 aa6.58□□□□□ -1.36
SYNPO2-204ENST00000448416 IGHV3OR16-9A0A0B4J2B5 98 aa6.58□□□□□ -1.36
SYNPO2-204ENST00000448416 A8MTW9 85 aa6.57□□□□□ -1.36
SYNPO2-204ENST00000448416 M0R2N4 97 aa6.57□□□□□ -1.36
SYNPO2-204ENST00000448416 NANOS2P60321 138 aaKnown RBP6.57□□□□□ -1.36
SYNPO2-204ENST00000448416 PRO3102Q9H379 93 aa6.57□□□□□ -1.36
SYNPO2-204ENST00000448416 BDP1A6H8Y1 2624 aa6.57□□□□□ -1.36
SYNPO2-204ENST00000448416 ABCA2Q9BZC7 2435 aa6.57□□□□□ -1.36
SYNPO2-204ENST00000448416 A0A087WZ39 114 aa6.56□□□□□ -1.36
SYNPO2-204ENST00000448416 CSPG4Q6UVK1 2322 aa6.56□□□□□ -1.36
SYNPO2-204ENST00000448416 UBE2E2Q96LR5 201 aa6.56□□□□□ -1.36
SYNPO2-204ENST00000448416 ADORA2A-AS1P86434 159 aa6.56□□□□□ -1.36
SYNPO2-204ENST00000448416 C6orf99Q4VX62 202 aa6.56□□□□□ -1.36
SYNPO2-204ENST00000448416 COL12A1Q99715 3063 aa6.56□□□□□ -1.36
SYNPO2-204ENST00000448416 IGLV4-60A0A075B6I1 120 aa6.56□□□□□ -1.36
SYNPO2-204ENST00000448416 TRBV7-4A0A0J9YYF1 115 aa6.55□□□□□ -1.36
SYNPO2-204ENST00000448416 CXCL6P80162 114 aa6.55□□□□□ -1.36
SYNPO2-204ENST00000448416 FAM229BQ4G0N7 80 aa6.55□□□□□ -1.36
SYNPO2-204ENST00000448416 SCXQ7RTU7 201 aa6.55□□□□□ -1.36
SYNPO2-204ENST00000448416 LOC110117498A0A087WWA1 95 aa6.55□□□□□ -1.36
SYNPO2-204ENST00000448416 ZNF561-AS1K7EIQ3 104 aa6.55□□□□□ -1.36
SYNPO2-204ENST00000448416 NREPQ16612 68 aa6.54□□□□□ -1.36
SYNPO2-204ENST00000448416 TMEM254Q8TBM7 123 aa6.54□□□□□ -1.36
SYNPO2-204ENST00000448416 MAP6D1Q9H9H5 199 aa6.54□□□□□ -1.36
SYNPO2-204ENST00000448416 ZNF843Q8N446 348 aa6.54□□□□□ -1.36
SYNPO2-204ENST00000448416 LOC100131303A0A0U1RQF7 123 aa6.53□□□□□ -1.36
SYNPO2-204ENST00000448416 RIF1Q5UIP0 2472 aaKnown RBP6.53□□□□□ -1.36
SYNPO2-204ENST00000448416 SLURP1P55000 103 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms