RNA–Protein interactions for RNA: ENST00000447480.5

TRIM4-204, Transcript of tripartite motif containing 4, humanhuman

TSL 3

Gene TRIM4, Length 639 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-204ENST00000447480 PRIMA1Q86XR5 153 aa5.55□□□□□ -1.52
TRIM4-204ENST00000447480 LINC00467Q9BRT7 94 aa5.55□□□□□ -1.52
TRIM4-204ENST00000447480 SPXQ9BT56 116 aa5.55□□□□□ -1.52
TRIM4-204ENST00000447480 IGHV1OR15-1A0A075B7D0 117 aa5.54□□□□□ -1.52
TRIM4-204ENST00000447480 A0A0J9YXV3 536 aa5.54□□□□□ -1.52
TRIM4-204ENST00000447480 G3V318 75 aa5.54□□□□□ -1.52
TRIM4-204ENST00000447480 BCE1O60756 84 aa5.54□□□□□ -1.52
TRIM4-204ENST00000447480 COX7CP15954 63 aa5.54□□□□□ -1.52
TRIM4-204ENST00000447480 SNRPD3P62318 126 aaKnown RBP5.54□□□□□ -1.52
TRIM4-204ENST00000447480 Q6ZQT7 251 aa5.54□□□□□ -1.52
TRIM4-204ENST00000447480 OR13C6PQ8NH95 151 aa5.54□□□□□ -1.52
TRIM4-204ENST00000447480 RHPN1-AS1Q9BWJ2 59 aa5.54□□□□□ -1.52
TRIM4-204ENST00000447480 CSDC2Q9Y534 153 aaKnown RBP5.54□□□□□ -1.52
TRIM4-204ENST00000447480 TRAV13-2A0A0B4J235 113 aa5.53□□□□□ -1.52
TRIM4-204ENST00000447480 IGHV3-35A0A0C4DH35 117 aa5.53□□□□□ -1.52
TRIM4-204ENST00000447480 NDUFC2-KCTD14E9PQ53 114 aa5.53□□□□□ -1.52
TRIM4-204ENST00000447480 H0YGX0 51 aa5.53□□□□□ -1.52
TRIM4-204ENST00000447480 HIST1H4AP62805 103 aaKnown RBP5.53□□□□□ -1.52
TRIM4-204ENST00000447480 HERVK_113P63121 156 aa5.53□□□□□ -1.52
TRIM4-204ENST00000447480 S100A7L2Q5SY68 101 aa5.53□□□□□ -1.52
TRIM4-204ENST00000447480 LCE1DQ5T752 114 aa5.53□□□□□ -1.52
TRIM4-204ENST00000447480 C9orf153Q5TBE3 101 aa5.53□□□□□ -1.52
TRIM4-204ENST00000447480 X6R8D5 127 aa5.53□□□□□ -1.52
TRIM4-204ENST00000447480 COL6A5A8TX70 2615 aa5.52□□□□□ -1.53
TRIM4-204ENST00000447480 IGHV3-66A0A0C4DH42 116 aa5.52□□□□□ -1.53
TRIM4-204ENST00000447480 IGLV5-39A0A0G2JS06 123 aa5.52□□□□□ -1.53
TRIM4-204ENST00000447480 A8MTW9 85 aa5.52□□□□□ -1.53
TRIM4-204ENST00000447480 CD28P10747 220 aa5.52□□□□□ -1.53
TRIM4-204ENST00000447480 TMEM258P61165 79 aa5.52□□□□□ -1.53
TRIM4-204ENST00000447480 LINC00527Q9UJ94 153 aa5.52□□□□□ -1.53
TRIM4-204ENST00000447480 ANK3Q12955 4377 aaKnown RBP5.51□□□□□ -1.53
TRIM4-204ENST00000447480 IGHV3OR16-8A0A075B7F1 116 aa5.51□□□□□ -1.53
TRIM4-204ENST00000447480 H7C2G1 150 aa5.51□□□□□ -1.53
TRIM4-204ENST00000447480 EMP1P54849 157 aa5.51□□□□□ -1.53
TRIM4-204ENST00000447480 HIST2H2BDQ6DRA6 164 aa5.51□□□□□ -1.53
TRIM4-204ENST00000447480 DUX3Q96PT4 197 aa5.51□□□□□ -1.53
TRIM4-204ENST00000447480 A0A087WWL8 130 aa5.5□□□□□ -1.53
TRIM4-204ENST00000447480 FAM236AA0A1B0GUQ0 79 aa5.5□□□□□ -1.53
TRIM4-204ENST00000447480 FAM236BA0A1B0GV22 79 aa5.5□□□□□ -1.53
TRIM4-204ENST00000447480 KRTAP9-7A8MTY7 169 aa5.5□□□□□ -1.53
TRIM4-204ENST00000447480 CCL24O00175 119 aa5.5□□□□□ -1.53
TRIM4-204ENST00000447480 BAALC-AS2P0C853 105 aa5.5□□□□□ -1.53
TRIM4-204ENST00000447480 RPL28P46779 137 aaKnown RBP5.5□□□□□ -1.53
TRIM4-204ENST00000447480 SLURP1P55000 103 aa5.5□□□□□ -1.53
TRIM4-204ENST00000447480 ADAMTSL4-AS1Q5T5F5 129 aa5.5□□□□□ -1.53
TRIM4-204ENST00000447480 ATP5EP2Q5VTU8 51 aa5.5□□□□□ -1.53
TRIM4-204ENST00000447480 Q6JHZ5 121 aa5.5□□□□□ -1.53
TRIM4-204ENST00000447480 GAGE2AQ6NT46 116 aa5.5□□□□□ -1.53
TRIM4-204ENST00000447480 LINC00308Q8TCZ7 52 aa5.5□□□□□ -1.53
TRIM4-204ENST00000447480 CHCHD5Q9BSY4 110 aa5.5□□□□□ -1.53
TRIM4-204ENST00000447480 IGHV3OR16-13A0A075B7E8 117 aa5.49□□□□□ -1.53
TRIM4-204ENST00000447480 TRAV8-3A0A0A6YYJ7 113 aa5.49□□□□□ -1.53
TRIM4-204ENST00000447480 IGHV3-74A0A0B4J1X5 117 aa5.49□□□□□ -1.53
TRIM4-204ENST00000447480 K7EQG2 157 aa5.49□□□□□ -1.53
TRIM4-204ENST00000447480 PRB4P10163 310 aaPredicted RBP5.49□□□□□ -1.53
TRIM4-204ENST00000447480 CMC4P56277 68 aaPredicted RBP5.49□□□□□ -1.53
TRIM4-204ENST00000447480 BEAN1Q3B7T3 259 aa5.49□□□□□ -1.53
TRIM4-204ENST00000447480 UNQ9165/PRO28630Q6UXU0 137 aa5.49□□□□□ -1.53
TRIM4-204ENST00000447480 OBSCN-AS1Q96MR7 158 aa5.49□□□□□ -1.53
TRIM4-204ENST00000447480 UBE2D4Q9Y2X8 147 aa5.49□□□□□ -1.53
TRIM4-204ENST00000447480 IGHV3-49A0A0A0MS15 119 aa5.48□□□□□ -1.53
TRIM4-204ENST00000447480 TRAV12-3A0A0B4J271 114 aa5.48□□□□□ -1.53
TRIM4-204ENST00000447480 TRBV10-3A0A0K0K1G6 114 aa5.48□□□□□ -1.53
TRIM4-204ENST00000447480 IGHV3-11P01762 117 aa5.48□□□□□ -1.53
TRIM4-204ENST00000447480 IGHV3-53P01767 116 aa5.48□□□□□ -1.53
TRIM4-204ENST00000447480 RPL18AQ02543 176 aaKnown RBP5.48□□□□□ -1.53
TRIM4-204ENST00000447480 C9orf66Q5T8R8 295 aa5.48□□□□□ -1.53
TRIM4-204ENST00000447480 SERP2Q8N6R1 65 aa5.48□□□□□ -1.53
TRIM4-204ENST00000447480 LINC00482Q8N8I6 264 aa5.48□□□□□ -1.53
TRIM4-204ENST00000447480 FAM104AQ969W3 186 aa5.48□□□□□ -1.53
TRIM4-204ENST00000447480 CUBNO60494 3623 aa5.48□□□□□ -1.53
TRIM4-204ENST00000447480 WNK1Q9H4A3 2382 aa5.48□□□□□ -1.53
TRIM4-204ENST00000447480 TRBV10-1A0A0K0K1A3 114 aa5.47□□□□□ -1.53
TRIM4-204ENST00000447480 A0A1W2PRX2 142 aa5.47□□□□□ -1.53
TRIM4-204ENST00000447480 H3BQ85 93 aa5.47□□□□□ -1.53
TRIM4-204ENST00000447480 J3KRW8 73 aa5.47□□□□□ -1.53
TRIM4-204ENST00000447480 MALP21145 153 aa5.47□□□□□ -1.53
TRIM4-204ENST00000447480 HOXD3P31249 432 aaPredicted RBP5.47□□□□□ -1.53
TRIM4-204ENST00000447480 DAZ2Q13117 558 aaKnown RBP5.47□□□□□ -1.53
TRIM4-204ENST00000447480 FAM74A4Q5TZK3 123 aa5.47□□□□□ -1.53
TRIM4-204ENST00000447480 DAZ4Q86SG3 579 aaKnown RBP5.47□□□□□ -1.53
TRIM4-204ENST00000447480 C11orf44Q8N8P7 122 aa5.47□□□□□ -1.53
TRIM4-204ENST00000447480 DYNLRB2Q8TF09 96 aa5.47□□□□□ -1.53
TRIM4-204ENST00000447480 C2orf48Q96LS8 159 aa5.47□□□□□ -1.53
TRIM4-204ENST00000447480 CHCHD7Q9BUK0 85 aa5.47□□□□□ -1.53
TRIM4-204ENST00000447480 JPT2Q9H910 190 aa5.47□□□□□ -1.53
TRIM4-204ENST00000447480 DAZ3Q9NR90 486 aaKnown RBP5.47□□□□□ -1.53
TRIM4-204ENST00000447480 TRAV25A0A0B4J276 109 aa5.46□□□□□ -1.54
TRIM4-204ENST00000447480 NDUFC2O95298 119 aa5.46□□□□□ -1.54
TRIM4-204ENST00000447480 LINC00694P0DN24 101 aa5.46□□□□□ -1.54
TRIM4-204ENST00000447480 DGAT2L7PQ6IED9 249 aa5.46□□□□□ -1.54
TRIM4-204ENST00000447480 CLEC2BQ92478 149 aa5.46□□□□□ -1.54
TRIM4-204ENST00000447480 OPRPNQ99935 248 aaPredicted RBP5.46□□□□□ -1.54
TRIM4-204ENST00000447480 STAB1Q9NY15 2570 aa5.46□□□□□ -1.54
TRIM4-204ENST00000447480 SMIM9A6NGZ8 99 aa5.45□□□□□ -1.54
TRIM4-204ENST00000447480 F6UB75 175 aa5.45□□□□□ -1.54
TRIM4-204ENST00000447480 WFDC9Q8NEX5 89 aa5.45□□□□□ -1.54
TRIM4-204ENST00000447480 ZNF625Q96I27 306 aaPredicted RBP5.45□□□□□ -1.54
TRIM4-204ENST00000447480 JMJD7-PLA2G4BH0Y9G9 81 aa5.44□□□□□ -1.54
TRIM4-204ENST00000447480 RS1O15537 224 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms