RNA–Protein interactions for RNA: ENST00000446182.5

PTPRN-208, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 5

Gene PTPRN, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-208ENST00000446182 LINC00474Q9P2X8 69 aa6.5□□□□□ -1.37
PTPRN-208ENST00000446182 APCSP02743 223 aa6.49□□□□□ -1.37
PTPRN-208ENST00000446182 XCL1P47992 114 aa6.49□□□□□ -1.37
PTPRN-208ENST00000446182 HBBP68871 147 aa6.49□□□□□ -1.37
PTPRN-208ENST00000446182 Q6ZRP5 223 aa6.49□□□□□ -1.37
PTPRN-208ENST00000446182 OR5A1Q8NGJ0 315 aa6.49□□□□□ -1.37
PTPRN-208ENST00000446182 LINC00526Q96FQ7 95 aa6.49□□□□□ -1.37
PTPRN-208ENST00000446182 CARD19Q96LW7 228 aa6.49□□□□□ -1.37
PTPRN-208ENST00000446182 PKIGQ9Y2B9 76 aa6.49□□□□□ -1.37
PTPRN-208ENST00000446182 IGHV1-58A0A0C4DH39 117 aa6.48□□□□□ -1.37
PTPRN-208ENST00000446182 CCL25O15444 150 aa6.48□□□□□ -1.37
PTPRN-208ENST00000446182 ZNF25P17030 456 aaPredicted RBP6.48□□□□□ -1.37
PTPRN-208ENST00000446182 RIGQ13278 110 aa6.48□□□□□ -1.37
PTPRN-208ENST00000446182 LPAP08519 4548 aa6.47□□□□□ -1.37
PTPRN-208ENST00000446182 LINC00959A0A1B0GUT2 108 aa6.47□□□□□ -1.37
PTPRN-208ENST00000446182 SDHAF1A6NFY7 115 aa6.47□□□□□ -1.37
PTPRN-208ENST00000446182 HIGD1CA8MV81 97 aa6.47□□□□□ -1.37
PTPRN-208ENST00000446182 GAS8-AS1O95177 125 aa6.47□□□□□ -1.37
PTPRN-208ENST00000446182 TMEM136Q6ZRR5 245 aa6.47□□□□□ -1.37
PTPRN-208ENST00000446182 NUP35Q8NFH5 326 aa6.47□□□□□ -1.37
PTPRN-208ENST00000446182 HIST1H2BLQ99880 126 aa6.47□□□□□ -1.37
PTPRN-208ENST00000446182 A0A1B0GXF2 115 aa6.46□□□□□ -1.38
PTPRN-208ENST00000446182 FABP4P15090 132 aa6.46□□□□□ -1.38
PTPRN-208ENST00000446182 PMCHP20382 165 aa6.46□□□□□ -1.38
PTPRN-208ENST00000446182 PTTG1IPP53801 180 aa6.46□□□□□ -1.38
PTPRN-208ENST00000446182 SYCNQ0VAF6 134 aa6.46□□□□□ -1.38
PTPRN-208ENST00000446182 JOSD1Q15040 202 aaPredicted RBP6.46□□□□□ -1.38
PTPRN-208ENST00000446182 BAGE3Q86Y29 109 aa6.46□□□□□ -1.38
PTPRN-208ENST00000446182 TRBV6-5A0A0K0K1A5 114 aa6.45□□□□□ -1.38
PTPRN-208ENST00000446182 A0A1B0GUT8 65 aa6.45□□□□□ -1.38
PTPRN-208ENST00000446182 I3L3M4 83 aa6.45□□□□□ -1.38
PTPRN-208ENST00000446182 TSHBP01222 138 aa6.45□□□□□ -1.38
PTPRN-208ENST00000446182 CD164L2Q6UWJ8 174 aa6.45□□□□□ -1.38
PTPRN-208ENST00000446182 SMIM15Q7Z3B0 74 aa6.45□□□□□ -1.38
PTPRN-208ENST00000446182 OR10D4PQ8NGN7 298 aa6.45□□□□□ -1.38
PTPRN-208ENST00000446182 TMEM101Q96IK0 257 aa6.45□□□□□ -1.38
PTPRN-208ENST00000446182 ZNF561-AS1K7EIQ3 104 aa6.44□□□□□ -1.38
PTPRN-208ENST00000446182 CAMPP49913 170 aa6.44□□□□□ -1.38
PTPRN-208ENST00000446182 SS18Q15532 418 aa6.44□□□□□ -1.38
PTPRN-208ENST00000446182 CHCHD1Q96BP2 118 aaKnown RBP6.44□□□□□ -1.38
PTPRN-208ENST00000446182 CDC42SE2Q9NRR3 84 aa6.44□□□□□ -1.38
PTPRN-208ENST00000446182 LOC107984640A0A0U1RRK4 108 aa6.43□□□□□ -1.38
PTPRN-208ENST00000446182 A0A1W2PNN7 141 aa6.43□□□□□ -1.38
PTPRN-208ENST00000446182 TSTD3H0UI37 97 aa6.43□□□□□ -1.38
PTPRN-208ENST00000446182 GAGE2BQ13066 116 aa6.43□□□□□ -1.38
PTPRN-208ENST00000446182 MRPL52Q86TS9 123 aaKnown RBP6.43□□□□□ -1.38
PTPRN-208ENST00000446182 MRAP2Q96G30 205 aa6.43□□□□□ -1.38
PTPRN-208ENST00000446182 LAMTOR2Q9Y2Q5 125 aa6.43□□□□□ -1.38
PTPRN-208ENST00000446182 IGLV4-69A0A075B6H9 119 aa6.42□□□□□ -1.38
PTPRN-208ENST00000446182 NUPR1O60356 82 aa6.42□□□□□ -1.38
PTPRN-208ENST00000446182 PPBPP02775 128 aa6.42□□□□□ -1.38
PTPRN-208ENST00000446182 LINC00310P59036 64 aa6.42□□□□□ -1.38
PTPRN-208ENST00000446182 MRPL54Q6P161 138 aaKnown RBP6.42□□□□□ -1.38
PTPRN-208ENST00000446182 ZNF664Q8N3J9 261 aa6.42□□□□□ -1.38
PTPRN-208ENST00000446182 ST20Q9HBF5 79 aa6.42□□□□□ -1.38
PTPRN-208ENST00000446182 PSORS1C2Q9UIG4 136 aa6.42□□□□□ -1.38
PTPRN-208ENST00000446182 POLR2KP53803 58 aaKnown RBP6.41□□□□□ -1.38
PTPRN-208ENST00000446182 C9orf116Q5BN46 136 aaPredicted RBP6.41□□□□□ -1.38
PTPRN-208ENST00000446182 PYY3Q5JQD4 70 aa6.41□□□□□ -1.38
PTPRN-208ENST00000446182 ALKBH7Q9BT30 221 aaPredicted RBP6.41□□□□□ -1.38
PTPRN-208ENST00000446182 TRBV27A0A0K0K1C4 114 aa6.4□□□□□ -1.38
PTPRN-208ENST00000446182 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.4□□□□□ -1.38
PTPRN-208ENST00000446182 COX7A2LO14548 114 aa6.4□□□□□ -1.38
PTPRN-208ENST00000446182 SERF1AO75920 110 aa6.4□□□□□ -1.38
PTPRN-208ENST00000446182 APOMO95445 188 aa6.4□□□□□ -1.38
PTPRN-208ENST00000446182 MALP21145 153 aa6.4□□□□□ -1.38
PTPRN-208ENST00000446182 PDZD11Q5EBL8 140 aa6.4□□□□□ -1.38
PTPRN-208ENST00000446182 CAMK2N2Q96S95 79 aa6.4□□□□□ -1.38
PTPRN-208ENST00000446182 C20orf202A1L168 122 aa6.39□□□□□ -1.39
PTPRN-208ENST00000446182 HSBP1O75506 76 aa6.39□□□□□ -1.39
PTPRN-208ENST00000446182 PMCHL1Q16048 86 aa6.39□□□□□ -1.39
PTPRN-208ENST00000446182 LBHQ53QV2 105 aaPredicted RBP6.39□□□□□ -1.39
PTPRN-208ENST00000446182 PHF5AQ7RTV0 110 aaKnown RBP6.39□□□□□ -1.39
PTPRN-208ENST00000446182 C18orf32Q8TCD1 76 aa6.39□□□□□ -1.39
PTPRN-208ENST00000446182 C2orf48Q96LS8 159 aa6.39□□□□□ -1.39
PTPRN-208ENST00000446182 RPL18AQ02543 176 aaKnown RBP6.38□□□□□ -1.39
PTPRN-208ENST00000446182 KIAA1644Q3SXP7 199 aa6.38□□□□□ -1.39
PTPRN-208ENST00000446182 RNASE13Q5GAN3 156 aaKnown RBP6.38□□□□□ -1.39
PTPRN-208ENST00000446182 C1orf137Q5JT78 98 aa6.38□□□□□ -1.39
PTPRN-208ENST00000446182 TMEM191AQ9H0A3 160 aa6.38□□□□□ -1.39
PTPRN-208ENST00000446182 HSPB8Q9UJY1 196 aa6.38□□□□□ -1.39
PTPRN-208ENST00000446182 CSDC2Q9Y534 153 aaKnown RBP6.38□□□□□ -1.39
PTPRN-208ENST00000446182 TRAV13-1A0A0B4J241 112 aa6.37□□□□□ -1.39
PTPRN-208ENST00000446182 SCGB1D1O95968 90 aa6.37□□□□□ -1.39
PTPRN-208ENST00000446182 PPP1R17O96001 155 aa6.37□□□□□ -1.39
PTPRN-208ENST00000446182 C5orf38Q86SI9 138 aa6.37□□□□□ -1.39
PTPRN-208ENST00000446182 AMN1Q8IY45 258 aa6.37□□□□□ -1.39
PTPRN-208ENST00000446182 ORMDL3Q8N138 153 aa6.37□□□□□ -1.39
PTPRN-208ENST00000446182 PRR26Q8N8Z3 221 aa6.37□□□□□ -1.39
PTPRN-208ENST00000446182 OPRPNQ99935 248 aaPredicted RBP6.37□□□□□ -1.39
PTPRN-208ENST00000446182 UBE2D4Q9Y2X8 147 aa6.37□□□□□ -1.39
PTPRN-208ENST00000446182 PCP4L1A6NKN8 68 aa6.36□□□□□ -1.39
PTPRN-208ENST00000446182 SMKR1H3BMG3 65 aa6.36□□□□□ -1.39
PTPRN-208ENST00000446182 K7EMI3 77 aa6.36□□□□□ -1.39
PTPRN-208ENST00000446182 VCYO14598 125 aa6.36□□□□□ -1.39
PTPRN-208ENST00000446182 IGLV7-43P04211 117 aa6.36□□□□□ -1.39
PTPRN-208ENST00000446182 LINC00614P0C842 121 aa6.36□□□□□ -1.39
PTPRN-208ENST00000446182 FCER1GP30273 86 aa6.36□□□□□ -1.39
PTPRN-208ENST00000446182 SPAG11BQ08648 103 aa6.36□□□□□ -1.39
PTPRN-208ENST00000446182 RNF151Q2KHN1 245 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms