RNA–Protein interactions for RNA: ENST00000442730.1

HDLBP-220, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-220ENST00000442730 ORMDL2Q53FV1 153 aa14.09□□□□□ -0.15
HDLBP-220ENST00000442730 FAM104AQ969W3 186 aa14.09□□□□□ -0.15
HDLBP-220ENST00000442730 SMCO4Q9NRQ5 59 aa14.09□□□□□ -0.15
HDLBP-220ENST00000442730 TRAPPC1Q9Y5R8 145 aa14.09□□□□□ -0.15
HDLBP-220ENST00000442730 COX6A2Q02221 97 aa14.08□□□□□ -0.16
HDLBP-220ENST00000442730 LINC00526Q96FQ7 95 aa14.08□□□□□ -0.16
HDLBP-220ENST00000442730 RPL37AP61513 92 aaKnown RBP14.07□□□□□ -0.16
HDLBP-220ENST00000442730 CYSLTR1Q9Y271 337 aa14.07□□□□□ -0.16
HDLBP-220ENST00000442730 COX7A2LO14548 114 aa14.06□□□□□ -0.16
HDLBP-220ENST00000442730 C2orf66Q6UXQ4 117 aa14.06□□□□□ -0.16
HDLBP-220ENST00000442730 PRSS3P2Q8NHM4 247 aa14.06□□□□□ -0.16
HDLBP-220ENST00000442730 PKHD1L1Q86WI1 4243 aa14.05□□□□□ -0.16
HDLBP-220ENST00000442730 A0A087WYN8 130 aa14.05□□□□□ -0.16
HDLBP-220ENST00000442730 MRPS36P82909 103 aaKnown RBP14.05□□□□□ -0.16
HDLBP-220ENST00000442730 MALP21145 153 aa14.04□□□□□ -0.16
HDLBP-220ENST00000442730 CARD19Q96LW7 228 aa14.04□□□□□ -0.16
HDLBP-220ENST00000442730 OPRPNQ99935 248 aaPredicted RBP14.04□□□□□ -0.16
HDLBP-220ENST00000442730 PYGO1Q9Y3Y4 419 aa14.04□□□□□ -0.16
HDLBP-220ENST00000442730 PLAC8Q9NZF1 115 aa14.03□□□□□ -0.16
HDLBP-220ENST00000442730 IGLV4-3A0A075B6K6 122 aa14.02□□□□□ -0.17
HDLBP-220ENST00000442730 IGKV2-24A0A0C4DH68 120 aa14.02□□□□□ -0.17
HDLBP-220ENST00000442730 IFITM10A6NMD0 228 aa14.02□□□□□ -0.17
HDLBP-220ENST00000442730 ZNF561-AS1K7EIQ3 104 aa14.02□□□□□ -0.17
HDLBP-220ENST00000442730 FA2HQ7L5A8 372 aa14.02□□□□□ -0.17
HDLBP-220ENST00000442730 DPH3Q96FX2 82 aa14.02□□□□□ -0.17
HDLBP-220ENST00000442730 A0A096LNI7 61 aa14.01□□□□□ -0.17
HDLBP-220ENST00000442730 SYCNQ0VAF6 134 aa14.01□□□□□ -0.17
HDLBP-220ENST00000442730 IGLV4-69A0A075B6H9 119 aa14□□□□□ -0.17
HDLBP-220ENST00000442730 G0S2P27469 103 aa14□□□□□ -0.17
HDLBP-220ENST00000442730 MAJINQ3KP22 176 aa14□□□□□ -0.17
HDLBP-220ENST00000442730 C5orf38Q86SI9 138 aa14□□□□□ -0.17
HDLBP-220ENST00000442730 TMEM141Q96I45 108 aa14□□□□□ -0.17
HDLBP-220ENST00000442730 LINC01546A6NGU7 62 aa13.99□□□□□ -0.17
HDLBP-220ENST00000442730 KRTAP29-1A8MX34 341 aaPredicted RBP13.99□□□□□ -0.17
HDLBP-220ENST00000442730 C18orf32Q8TCD1 76 aa13.99□□□□□ -0.17
HDLBP-220ENST00000442730 PKIGQ9Y2B9 76 aa13.99□□□□□ -0.17
HDLBP-220ENST00000442730 LRP1Q07954 4544 aaKnown RBP13.99□□□□□ -0.17
HDLBP-220ENST00000442730 HNRNPA3P51991 378 aaKnown RBP13.98□□□□□ -0.17
HDLBP-220ENST00000442730 Q6ZN92 141 aa13.98□□□□□ -0.17
HDLBP-220ENST00000442730 TOMM6Q96B49 74 aa13.98□□□□□ -0.17
HDLBP-220ENST00000442730 J3QL48 77 aa13.97□□□□□ -0.17
HDLBP-220ENST00000442730 TEX43Q6ZNM6 134 aa13.97□□□□□ -0.17
HDLBP-220ENST00000442730 IGHV3OR16-9A0A0B4J2B5 98 aa13.96□□□□□ -0.17
HDLBP-220ENST00000442730 IGIPA6NJ69 53 aa13.96□□□□□ -0.17
HDLBP-220ENST00000442730 APOMO95445 188 aa13.96□□□□□ -0.17
HDLBP-220ENST00000442730 NPSP0C0P6 89 aa13.96□□□□□ -0.17
HDLBP-220ENST00000442730 Q6ZRU5 148 aa13.96□□□□□ -0.17
HDLBP-220ENST00000442730 C2orf88Q9BSF0 95 aa13.96□□□□□ -0.17
HDLBP-220ENST00000442730 FAT3Q8TDW7 4589 aa13.95□□□□□ -0.18
HDLBP-220ENST00000442730 SPAG11BQ08648 103 aa13.95□□□□□ -0.18
HDLBP-220ENST00000442730 STPG4Q8N801 248 aa13.95□□□□□ -0.18
HDLBP-220ENST00000442730 C2orf48Q96LS8 159 aa13.95□□□□□ -0.18
HDLBP-220ENST00000442730 TIMM17AQ99595 171 aa13.95□□□□□ -0.18
HDLBP-220ENST00000442730 LINC00474Q9P2X8 69 aa13.95□□□□□ -0.18
HDLBP-220ENST00000442730 OR10D4PQ8NGN7 298 aa13.94□□□□□ -0.18
HDLBP-220ENST00000442730 CAMK2N2Q96S95 79 aa13.94□□□□□ -0.18
HDLBP-220ENST00000442730 LINC00173Q6ZV60 143 aa13.93□□□□□ -0.18
HDLBP-220ENST00000442730 LINC01549A6NIU2 74 aa13.92□□□□□ -0.18
HDLBP-220ENST00000442730 PAPPA-AS1Q5QFB9 102 aa13.92□□□□□ -0.18
HDLBP-220ENST00000442730 ZC2HC1BQ5TFG8 222 aa13.92□□□□□ -0.18
HDLBP-220ENST00000442730 URB1-AS1Q96HZ7 61 aa13.92□□□□□ -0.18
HDLBP-220ENST00000442730 SCGB3A1Q96QR1 104 aa13.92□□□□□ -0.18
HDLBP-220ENST00000442730 AMELXQ99217 191 aa13.92□□□□□ -0.18
HDLBP-220ENST00000442730 VCX2Q9H322 139 aa13.92□□□□□ -0.18
HDLBP-220ENST00000442730 ERASQ7Z444 233 aa13.91□□□□□ -0.18
HDLBP-220ENST00000442730 C7orf33Q8WU49 177 aa13.91□□□□□ -0.18
HDLBP-220ENST00000442730 ORAOV1Q8WV07 137 aa13.91□□□□□ -0.18
HDLBP-220ENST00000442730 LOC107984640A0A0U1RRK4 108 aa13.9□□□□□ -0.18
HDLBP-220ENST00000442730 LINC00614P0C842 121 aa13.9□□□□□ -0.18
HDLBP-220ENST00000442730 UBE2D1P51668 147 aa13.9□□□□□ -0.18
HDLBP-220ENST00000442730 PTTG1IPP53801 180 aa13.9□□□□□ -0.18
HDLBP-220ENST00000442730 RAB5BP61020 215 aa13.9□□□□□ -0.18
HDLBP-220ENST00000442730 LINC00242Q5T6M2 205 aa13.9□□□□□ -0.18
HDLBP-220ENST00000442730 SCO1O75880 301 aa13.89□□□□□ -0.19
HDLBP-220ENST00000442730 OXTP01178 125 aa13.89□□□□□ -0.19
HDLBP-220ENST00000442730 COLCA2A8K830 154 aa13.88□□□□□ -0.19
HDLBP-220ENST00000442730 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.88□□□□□ -0.19
HDLBP-220ENST00000442730 TRGC2P03986 189 aa13.88□□□□□ -0.19
HDLBP-220ENST00000442730 A0A087WZ39 114 aa13.87□□□□□ -0.19
HDLBP-220ENST00000442730 A0A096LNJ9 63 aa13.87□□□□□ -0.19
HDLBP-220ENST00000442730 HBDP02042 147 aa13.87□□□□□ -0.19
HDLBP-220ENST00000442730 GAGE2BQ13066 116 aa13.87□□□□□ -0.19
HDLBP-220ENST00000442730 PMCHL1Q16048 86 aa13.86□□□□□ -0.19
HDLBP-220ENST00000442730 A0A0J9YXV3 536 aa13.85□□□□□ -0.19
HDLBP-220ENST00000442730 F8WDY8 70 aa13.85□□□□□ -0.19
HDLBP-220ENST00000442730 PRR3P79522 188 aaKnown RBP13.85□□□□□ -0.19
HDLBP-220ENST00000442730 RNF151Q2KHN1 245 aa13.85□□□□□ -0.19
HDLBP-220ENST00000442730 MRPL35Q9NZE8 188 aaKnown RBP13.85□□□□□ -0.19
HDLBP-220ENST00000442730 NDUFA1O15239 70 aa13.83□□□□□ -0.2
HDLBP-220ENST00000442730 RPL18AQ02543 176 aaKnown RBP13.83□□□□□ -0.2
HDLBP-220ENST00000442730 CHCHD1Q96BP2 118 aaKnown RBP13.83□□□□□ -0.2
HDLBP-220ENST00000442730 KIAA0087Q14695 138 aa13.82□□□□□ -0.2
HDLBP-220ENST00000442730 C10orf25Q5T742 122 aa13.82□□□□□ -0.2
HDLBP-220ENST00000442730 FAM19A3Q7Z5A8 133 aa13.82□□□□□ -0.2
HDLBP-220ENST00000442730 BAGE3Q86Y29 109 aa13.82□□□□□ -0.2
HDLBP-220ENST00000442730 SEC11AP67812 179 aa13.81□□□□□ -0.2
HDLBP-220ENST00000442730 HERVK_113P63121 156 aa13.8□□□□□ -0.2
HDLBP-220ENST00000442730 PDZD11Q5EBL8 140 aa13.8□□□□□ -0.2
HDLBP-220ENST00000442730 UNQ6190/PRO20217Q6UXQ8 127 aa13.8□□□□□ -0.2
HDLBP-220ENST00000442730 GEMIN7Q9H840 131 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms