RNA–Protein interactions for RNA: ENST00000442560.5

RFX3-206, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-206ENST00000442560 SPAG11BQ08648 103 aa4.34□□□□□ -1.71
RFX3-206ENST00000442560 Q6ZUT4 128 aa4.34□□□□□ -1.71
RFX3-206ENST00000442560 TCTE3Q8IZS6 198 aa4.34□□□□□ -1.71
RFX3-206ENST00000442560 TSKUQ8WUA8 353 aa4.34□□□□□ -1.71
RFX3-206ENST00000442560 C2orf48Q96LS8 159 aa4.34□□□□□ -1.71
RFX3-206ENST00000442560 SUMO2P61956 95 aaKnown RBP4.33□□□□□ -1.72
RFX3-206ENST00000442560 BLOC1S1P78537 153 aa4.33□□□□□ -1.72
RFX3-206ENST00000442560 ALKAL2Q6UX46 152 aa4.33□□□□□ -1.72
RFX3-206ENST00000442560 LINC01551Q86U37 167 aa4.33□□□□□ -1.72
RFX3-206ENST00000442560 PRR26Q8N8Z3 221 aa4.33□□□□□ -1.72
RFX3-206ENST00000442560 NRACQ8N912 160 aa4.33□□□□□ -1.72
RFX3-206ENST00000442560 KIR2DL4Q99706 377 aa4.33□□□□□ -1.72
RFX3-206ENST00000442560 OSTCQ9NRP0 149 aa4.33□□□□□ -1.72
RFX3-206ENST00000442560 CSDC2Q9Y534 153 aaKnown RBP4.33□□□□□ -1.72
RFX3-206ENST00000442560 IGLV7-43P04211 117 aa4.32□□□□□ -1.72
RFX3-206ENST00000442560 SMAGPQ0VAQ4 97 aa4.32□□□□□ -1.72
RFX3-206ENST00000442560 RIGQ13278 110 aa4.32□□□□□ -1.72
RFX3-206ENST00000442560 RNF151Q2KHN1 245 aa4.32□□□□□ -1.72
RFX3-206ENST00000442560 KRTAP11-1Q8IUC1 163 aa4.32□□□□□ -1.72
RFX3-206ENST00000442560 SMIM7Q9BQ49 75 aa4.32□□□□□ -1.72
RFX3-206ENST00000442560 EIF5A2Q9GZV4 153 aaKnown RBP4.32□□□□□ -1.72
RFX3-206ENST00000442560 A0A087WZ39 114 aa4.31□□□□□ -1.72
RFX3-206ENST00000442560 FAM168BA1KXE4 195 aa4.31□□□□□ -1.72
RFX3-206ENST00000442560 ZNF727A8MUV8 499 aa4.31□□□□□ -1.72
RFX3-206ENST00000442560 PPP1R17O96001 155 aa4.31□□□□□ -1.72
RFX3-206ENST00000442560 RPL39P62891 51 aaKnown RBP4.31□□□□□ -1.72
RFX3-206ENST00000442560 MRPL51Q4U2R6 128 aaKnown RBP4.31□□□□□ -1.72
RFX3-206ENST00000442560 OR10D4PQ8NGN7 298 aa4.31□□□□□ -1.72
RFX3-206ENST00000442560 ORAOV1Q8WV07 137 aa4.31□□□□□ -1.72
RFX3-206ENST00000442560 DIRC1Q969H9 104 aa4.31□□□□□ -1.72
RFX3-206ENST00000442560 TMEM18Q96B42 140 aa4.31□□□□□ -1.72
RFX3-206ENST00000442560 TIMM21Q9BVV7 248 aa4.31□□□□□ -1.72
RFX3-206ENST00000442560 MRPL35Q9NZE8 188 aaKnown RBP4.31□□□□□ -1.72
RFX3-206ENST00000442560 V9GYV3 84 aa4.31□□□□□ -1.72
RFX3-206ENST00000442560 PPP1R2P9O14990 202 aa4.3□□□□□ -1.72
RFX3-206ENST00000442560 SRP19P09132 144 aaKnown RBP4.3□□□□□ -1.72
RFX3-206ENST00000442560 GAGE2EQ4V326 116 aa4.3□□□□□ -1.72
RFX3-206ENST00000442560 C10orf25Q5T742 122 aa4.3□□□□□ -1.72
RFX3-206ENST00000442560 FAM104BQ5XKR9 115 aa4.3□□□□□ -1.72
RFX3-206ENST00000442560 UNQ6190/PRO20217Q6UXQ8 127 aa4.3□□□□□ -1.72
RFX3-206ENST00000442560 FAM19A5Q7Z5A7 132 aaPredicted RBP4.3□□□□□ -1.72
RFX3-206ENST00000442560 IMMP2LQ96T52 175 aa4.3□□□□□ -1.72
RFX3-206ENST00000442560 GAGE2DQ9UEU5 116 aa4.3□□□□□ -1.72
RFX3-206ENST00000442560 IGHV3OR16-9A0A0B4J2B5 98 aa4.29□□□□□ -1.72
RFX3-206ENST00000442560 H0Y9J4 135 aa4.29□□□□□ -1.72
RFX3-206ENST00000442560 NDUFA1O15239 70 aa4.29□□□□□ -1.72
RFX3-206ENST00000442560 CKS2P33552 79 aa4.29□□□□□ -1.72
RFX3-206ENST00000442560 RPL23P62829 140 aaKnown RBP4.29□□□□□ -1.72
RFX3-206ENST00000442560 FAM104AQ969W3 186 aa4.29□□□□□ -1.72
RFX3-206ENST00000442560 C20orf78Q9BR46 151 aa4.29□□□□□ -1.72
RFX3-206ENST00000442560 C6orf48Q9UBA6 75 aa4.29□□□□□ -1.72
RFX3-206ENST00000442560 NAT8BQ9UHF3 227 aa4.29□□□□□ -1.72
RFX3-206ENST00000442560 LINC00862A6NCI5 91 aa4.28□□□□□ -1.72
RFX3-206ENST00000442560 IFITM10A6NMD0 228 aa4.28□□□□□ -1.72
RFX3-206ENST00000442560 F8WDY8 70 aa4.28□□□□□ -1.72
RFX3-206ENST00000442560 TCAPO15273 167 aa4.28□□□□□ -1.72
RFX3-206ENST00000442560 TNFRSF6BO95407 300 aa4.28□□□□□ -1.72
RFX3-206ENST00000442560 TLX1NBP0CAT3 122 aa4.28□□□□□ -1.72
RFX3-206ENST00000442560 UBE2BP63146 152 aa4.28□□□□□ -1.72
RFX3-206ENST00000442560 TMEM241Q24JQ0 296 aa4.28□□□□□ -1.72
RFX3-206ENST00000442560 FAM74A3Q4VXF1 159 aa4.28□□□□□ -1.72
RFX3-206ENST00000442560 KRTAP7-1Q8IUC3 87 aa4.28□□□□□ -1.72
RFX3-206ENST00000442560 SPANXA1Q9NS26 97 aa4.28□□□□□ -1.72
RFX3-206ENST00000442560 IGLV1-50A0A075B6I6 118 aa4.27□□□□□ -1.73
RFX3-206ENST00000442560 TRBV24-1A0A075B6N3 115 aa4.27□□□□□ -1.73
RFX3-206ENST00000442560 D6R8Y8 96 aa4.27□□□□□ -1.73
RFX3-206ENST00000442560 M0QXV9 152 aa4.27□□□□□ -1.73
RFX3-206ENST00000442560 KRTAP1-4P0C5Y4 121 aa4.27□□□□□ -1.73
RFX3-206ENST00000442560 RPL32P62910 135 aaKnown RBP4.27□□□□□ -1.73
RFX3-206ENST00000442560 HBBP68871 147 aa4.27□□□□□ -1.73
RFX3-206ENST00000442560 MRPS36P82909 103 aaKnown RBP4.27□□□□□ -1.73
RFX3-206ENST00000442560 ADIRFQ15847 76 aa4.27□□□□□ -1.73
RFX3-206ENST00000442560 PRR4Q16378 134 aa4.27□□□□□ -1.73
RFX3-206ENST00000442560 AKAP14Q86UN6 197 aa4.27□□□□□ -1.73
RFX3-206ENST00000442560 SMIM2Q9BVW6 85 aa4.27□□□□□ -1.73
RFX3-206ENST00000442560 SMDT1Q9H4I9 107 aa4.27□□□□□ -1.73
RFX3-206ENST00000442560 hCG_2014768A0A024R1R8 64 aa4.26□□□□□ -1.73
RFX3-206ENST00000442560 TGIF2-C20orf24A0A0A6YYL0 155 aa4.26□□□□□ -1.73
RFX3-206ENST00000442560 SMIM27A0A1W2PRY6 76 aa4.26□□□□□ -1.73
RFX3-206ENST00000442560 NPYP01303 97 aa4.26□□□□□ -1.73
RFX3-206ENST00000442560 UBE2D1P51668 147 aa4.26□□□□□ -1.73
RFX3-206ENST00000442560 KIAA0087Q14695 138 aa4.26□□□□□ -1.73
RFX3-206ENST00000442560 MRPL54Q6P161 138 aaKnown RBP4.26□□□□□ -1.73
RFX3-206ENST00000442560 C2orf82Q6UX34 121 aa4.26□□□□□ -1.73
RFX3-206ENST00000442560 NAT8Q9UHE5 227 aa4.26□□□□□ -1.73
RFX3-206ENST00000442560 IGLV4-3A0A075B6K6 122 aa4.25□□□□□ -1.73
RFX3-206ENST00000442560 A0A1B0GW15 77 aa4.25□□□□□ -1.73
RFX3-206ENST00000442560 C9JQL5 133 aa4.25□□□□□ -1.73
RFX3-206ENST00000442560 IFI27P40305 119 aaPredicted RBP4.25□□□□□ -1.73
RFX3-206ENST00000442560 C9orf129Q5T035 196 aaKnown RBP4.25□□□□□ -1.73
RFX3-206ENST00000442560 LINC00242Q5T6M2 205 aa4.25□□□□□ -1.73
RFX3-206ENST00000442560 PACRGQ96M98 296 aaPredicted RBP4.25□□□□□ -1.73
RFX3-206ENST00000442560 TRBV30A0A0K0K1B3 111 aa4.24□□□□□ -1.73
RFX3-206ENST00000442560 A0A1B0GXF2 115 aa4.24□□□□□ -1.73
RFX3-206ENST00000442560 NDUFC2-KCTD14E9PQ53 114 aa4.24□□□□□ -1.73
RFX3-206ENST00000442560 F8W036 122 aa4.24□□□□□ -1.73
RFX3-206ENST00000442560 S100A8P05109 93 aa4.24□□□□□ -1.73
RFX3-206ENST00000442560 RAB5AP20339 215 aa4.24□□□□□ -1.73
RFX3-206ENST00000442560 ZC2HC1BQ5TFG8 222 aa4.24□□□□□ -1.73
RFX3-206ENST00000442560 LOC389332A0A1B0GUA5 103 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms