RNA–Protein interactions for RNA: ENST00000441821.5

SYN3-204, Transcript of synapsin III, humanhuman

TSL 1 (best)

Gene SYN3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-204ENST00000441821 C20orf202A1L168 122 aa6.3□□□□□ -1.4
SYN3-204ENST00000441821 SDHAF1A6NFY7 115 aa6.3□□□□□ -1.4
SYN3-204ENST00000441821 HBDP02042 147 aa6.3□□□□□ -1.4
SYN3-204ENST00000441821 COTL1Q14019 142 aa6.3□□□□□ -1.4
SYN3-204ENST00000441821 IQCJQ1A5X6 159 aa6.3□□□□□ -1.4
SYN3-204ENST00000441821 KRTAP26-1Q6PEX3 210 aa6.3□□□□□ -1.4
SYN3-204ENST00000441821 NRACQ8N912 160 aa6.3□□□□□ -1.4
SYN3-204ENST00000441821 SPACA4Q8TDM5 124 aa6.3□□□□□ -1.4
SYN3-204ENST00000441821 PLAC8Q9NZF1 115 aa6.3□□□□□ -1.4
SYN3-204ENST00000441821 TRBV27A0A0K0K1C4 114 aa6.29□□□□□ -1.4
SYN3-204ENST00000441821 ATP5LO75964 103 aa6.29□□□□□ -1.4
SYN3-204ENST00000441821 CHTF8P0CG12 524 aa6.29□□□□□ -1.4
SYN3-204ENST00000441821 IFI27P40305 119 aaPredicted RBP6.29□□□□□ -1.4
SYN3-204ENST00000441821 PKIAP61925 76 aa6.29□□□□□ -1.4
SYN3-204ENST00000441821 PAPPA-AS1Q5QFB9 102 aa6.29□□□□□ -1.4
SYN3-204ENST00000441821 PRR34Q9NV39 138 aa6.29□□□□□ -1.4
SYN3-204ENST00000441821 FAT4Q6V0I7 4981 aa6.28□□□□□ -1.4
SYN3-204ENST00000441821 LEPROTL1O95214 131 aa6.28□□□□□ -1.4
SYN3-204ENST00000441821 FABP4P15090 132 aa6.28□□□□□ -1.4
SYN3-204ENST00000441821 PRR3P79522 188 aaKnown RBP6.28□□□□□ -1.4
SYN3-204ENST00000441821 PDZD11Q5EBL8 140 aa6.28□□□□□ -1.4
SYN3-204ENST00000441821 HIST3H2BBQ8N257 126 aa6.28□□□□□ -1.4
SYN3-204ENST00000441821 RPL39LQ96EH5 51 aaKnown RBP6.28□□□□□ -1.4
SYN3-204ENST00000441821 MAP1LC3CQ9BXW4 147 aa6.28□□□□□ -1.4
SYN3-204ENST00000441821 CYSLTR1Q9Y271 337 aa6.28□□□□□ -1.4
SYN3-204ENST00000441821 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.27□□□□□ -1.41
SYN3-204ENST00000441821 hDV102S1A0JD36 115 aa6.27□□□□□ -1.41
SYN3-204ENST00000441821 UBE2L6O14933 153 aa6.27□□□□□ -1.41
SYN3-204ENST00000441821 REG3GQ6UW15 175 aa6.27□□□□□ -1.41
SYN3-204ENST00000441821 CHCHD5Q9BSY4 110 aa6.27□□□□□ -1.41
SYN3-204ENST00000441821 IGHV1-24A0A0C4DH33 117 aa6.26□□□□□ -1.41
SYN3-204ENST00000441821 LINC01546A6NGU7 62 aa6.26□□□□□ -1.41
SYN3-204ENST00000441821 SLPIP03973 132 aa6.26□□□□□ -1.41
SYN3-204ENST00000441821 POLR2KP53803 58 aaKnown RBP6.26□□□□□ -1.41
SYN3-204ENST00000441821 SPINK6Q6UWN8 80 aa6.26□□□□□ -1.41
SYN3-204ENST00000441821 Q6ZN92 141 aa6.26□□□□□ -1.41
SYN3-204ENST00000441821 LINC00269Q8N2A0 174 aa6.26□□□□□ -1.41
SYN3-204ENST00000441821 NEXN-AS1Q8NBZ9 246 aa6.26□□□□□ -1.41
SYN3-204ENST00000441821 TRBV25-1A0A075B6N4 114 aa6.25□□□□□ -1.41
SYN3-204ENST00000441821 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.25□□□□□ -1.41
SYN3-204ENST00000441821 CLPSL2Q6UWE3 100 aa6.25□□□□□ -1.41
SYN3-204ENST00000441821 TMEM141Q96I45 108 aa6.25□□□□□ -1.41
SYN3-204ENST00000441821 TMEM101Q96IK0 257 aa6.25□□□□□ -1.41
SYN3-204ENST00000441821 SCGB3A1Q96QR1 104 aa6.25□□□□□ -1.41
SYN3-204ENST00000441821 HIST1H2BLQ99880 126 aa6.25□□□□□ -1.41
SYN3-204ENST00000441821 KRTAP9-6A0A140TA67 174 aa6.24□□□□□ -1.41
SYN3-204ENST00000441821 H7C423 109 aa6.24□□□□□ -1.41
SYN3-204ENST00000441821 NPSP0C0P6 89 aa6.24□□□□□ -1.41
SYN3-204ENST00000441821 KRTDAPP60985 99 aa6.24□□□□□ -1.41
SYN3-204ENST00000441821 RBX1P62877 108 aa6.24□□□□□ -1.41
SYN3-204ENST00000441821 AMMECR1LQ6DCA0 310 aa6.24□□□□□ -1.41
SYN3-204ENST00000441821 C2orf66Q6UXQ4 117 aa6.24□□□□□ -1.41
SYN3-204ENST00000441821 FAM19A2Q8N3H0 131 aa6.24□□□□□ -1.41
SYN3-204ENST00000441821 OR10D4PQ8NGN7 298 aa6.24□□□□□ -1.41
SYN3-204ENST00000441821 TMEM243Q9BU79 118 aa6.24□□□□□ -1.41
SYN3-204ENST00000441821 TRAV8-4A0A0B4J246 113 aa6.23□□□□□ -1.41
SYN3-204ENST00000441821 S100A12P80511 92 aa6.23□□□□□ -1.41
SYN3-204ENST00000441821 SRSF9Q13242 221 aaKnown RBP eCLIP6.23□□□□□ -1.41
SYN3-204ENST00000441821 NTM-AS1Q6ZSK4 140 aa6.23□□□□□ -1.41
SYN3-204ENST00000441821 ERASQ7Z444 233 aa6.23□□□□□ -1.41
SYN3-204ENST00000441821 IFI27L1Q96BM0 104 aa6.23□□□□□ -1.41
SYN3-204ENST00000441821 SPANXA1Q9NS26 97 aa6.23□□□□□ -1.41
SYN3-204ENST00000441821 IGLV10-54A0A075B6I4 117 aa6.22□□□□□ -1.41
SYN3-204ENST00000441821 HSBP1L1C9JCN9 74 aa6.22□□□□□ -1.41
SYN3-204ENST00000441821 SCGB1D1O95968 90 aa6.22□□□□□ -1.41
SYN3-204ENST00000441821 SMIM6P0DI80 62 aa6.22□□□□□ -1.41
SYN3-204ENST00000441821 ZNF25P17030 456 aaPredicted RBP6.22□□□□□ -1.41
SYN3-204ENST00000441821 COX6A2Q02221 97 aa6.22□□□□□ -1.41
SYN3-204ENST00000441821 REG3AQ06141 175 aa6.22□□□□□ -1.41
SYN3-204ENST00000441821 PMCHL1Q16048 86 aa6.22□□□□□ -1.41
SYN3-204ENST00000441821 MAJINQ3KP22 176 aa6.22□□□□□ -1.41
SYN3-204ENST00000441821 PET117Q6UWS5 81 aa6.22□□□□□ -1.41
SYN3-204ENST00000441821 C20orf203Q8NBC4 194 aa6.22□□□□□ -1.41
SYN3-204ENST00000441821 TOMM6Q96B49 74 aa6.22□□□□□ -1.41
SYN3-204ENST00000441821 TIMM17AQ99595 171 aa6.22□□□□□ -1.41
SYN3-204ENST00000441821 C2orf88Q9BSF0 95 aa6.22□□□□□ -1.41
SYN3-204ENST00000441821 TSHBP01222 138 aa6.21□□□□□ -1.42
SYN3-204ENST00000441821 GAGE6Q13070 117 aa6.21□□□□□ -1.42
SYN3-204ENST00000441821 STPG4Q8N801 248 aa6.21□□□□□ -1.42
SYN3-204ENST00000441821 A0A0U1RQV1 116 aa6.2□□□□□ -1.42
SYN3-204ENST00000441821 LOC105371267A0A1B0GV96 52 aa6.2□□□□□ -1.42
SYN3-204ENST00000441821 H0Y8G0 127 aa6.2□□□□□ -1.42
SYN3-204ENST00000441821 SYS1-DBNDD2H3BUS1 97 aa6.2□□□□□ -1.42
SYN3-204ENST00000441821 SEC11AP67812 179 aa6.2□□□□□ -1.42
SYN3-204ENST00000441821 OR5A1Q8NGJ0 315 aa6.2□□□□□ -1.42
SYN3-204ENST00000441821 URB1-AS1Q96HZ7 61 aa6.2□□□□□ -1.42
SYN3-204ENST00000441821 TIMM21Q9BVV7 248 aa6.2□□□□□ -1.42
SYN3-204ENST00000441821 VCX2Q9H322 139 aa6.2□□□□□ -1.42
SYN3-204ENST00000441821 PYGO1Q9Y3Y4 419 aa6.2□□□□□ -1.42
SYN3-204ENST00000441821 IGKV2-24A0A0C4DH68 120 aa6.19□□□□□ -1.42
SYN3-204ENST00000441821 NUPR1O60356 82 aa6.19□□□□□ -1.42
SYN3-204ENST00000441821 PLNP26678 52 aa6.19□□□□□ -1.42
SYN3-204ENST00000441821 LINC00310P59036 64 aa6.19□□□□□ -1.42
SYN3-204ENST00000441821 TEX43Q6ZNM6 134 aa6.19□□□□□ -1.42
SYN3-204ENST00000441821 CSDC2Q9Y534 153 aaKnown RBP6.19□□□□□ -1.42
SYN3-204ENST00000441821 TRAV12-1A0A0B4J245 112 aa6.18□□□□□ -1.42
SYN3-204ENST00000441821 JOSD1Q15040 202 aaPredicted RBP6.18□□□□□ -1.42
SYN3-204ENST00000441821 PMVKQ15126 192 aa6.18□□□□□ -1.42
SYN3-204ENST00000441821 CFAP161Q6P656 301 aa6.18□□□□□ -1.42
SYN3-204ENST00000441821 Q6ZRP5 223 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms