RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 MIFP14174 115 aa7.29□□□□□ -1.24
SYNE2-206ENST00000441438 IFI27P40305 119 aaPredicted RBP7.29□□□□□ -1.24
SYNE2-206ENST00000441438 DOPEY2Q9Y3R5 2298 aa7.29□□□□□ -1.24
SYNE2-206ENST00000441438 ATXN8Q156A1 80 aa7.29□□□□□ -1.24
SYNE2-206ENST00000441438 Q6JHZ5 121 aa7.29□□□□□ -1.24
SYNE2-206ENST00000441438 C20orf203Q8NBC4 194 aa7.29□□□□□ -1.24
SYNE2-206ENST00000441438 PRSS3P2Q8NHM4 247 aa7.29□□□□□ -1.24
SYNE2-206ENST00000441438 U3KQK5 164 aa7.29□□□□□ -1.24
SYNE2-206ENST00000441438 A0A096LNJ9 63 aa7.28□□□□□ -1.24
SYNE2-206ENST00000441438 IGHV3-21A0A0B4J1V1 117 aa7.28□□□□□ -1.24
SYNE2-206ENST00000441438 C10orf55Q5SWW7 151 aa7.28□□□□□ -1.24
SYNE2-206ENST00000441438 C8orf17Q9NRJ1 99 aa7.28□□□□□ -1.24
SYNE2-206ENST00000441438 HIVEP3Q5T1R4 2406 aa7.28□□□□□ -1.24
SYNE2-206ENST00000441438 IGHV3-74A0A0B4J1X5 117 aa7.28□□□□□ -1.24
SYNE2-206ENST00000441438 TRAV7A0A075B6U4 112 aa7.27□□□□□ -1.25
SYNE2-206ENST00000441438 A0A087X002 238 aa7.27□□□□□ -1.25
SYNE2-206ENST00000441438 NDUFA4L2Q9NRX3 87 aa7.27□□□□□ -1.25
SYNE2-206ENST00000441438 A0A1B0GUT8 65 aa7.27□□□□□ -1.25
SYNE2-206ENST00000441438 PRO1854Q9UHT4 67 aa7.27□□□□□ -1.25
SYNE2-206ENST00000441438 IGKV1D-37A0A075B6S9 117 aa7.26□□□□□ -1.25
SYNE2-206ENST00000441438 IGLV1-44P01699 117 aa7.26□□□□□ -1.25
SYNE2-206ENST00000441438 CD24P25063 80 aa7.26□□□□□ -1.25
SYNE2-206ENST00000441438 C2orf82Q6UX34 121 aa7.26□□□□□ -1.25
SYNE2-206ENST00000441438 TMEM223A0PJW6 202 aa7.26□□□□□ -1.25
SYNE2-206ENST00000441438 C9orf116Q5BN46 136 aaPredicted RBP7.26□□□□□ -1.25
SYNE2-206ENST00000441438 UBE2D4Q9Y2X8 147 aa7.26□□□□□ -1.25
SYNE2-206ENST00000441438 DOPEY1Q5JWR5 2465 aa7.26□□□□□ -1.25
SYNE2-206ENST00000441438 LYNX1G3V0Z9 82 aa7.26□□□□□ -1.25
SYNE2-206ENST00000441438 IGHV1-46P01743 117 aa7.26□□□□□ -1.25
SYNE2-206ENST00000441438 LYNX1P0DP58 116 aa7.26□□□□□ -1.25
SYNE2-206ENST00000441438 ERHP84090 104 aaKnown RBP7.26□□□□□ -1.25
SYNE2-206ENST00000441438 PLGLAQ15195 96 aa7.26□□□□□ -1.25
SYNE2-206ENST00000441438 FLNBO75369 2602 aaKnown RBP7.25□□□□□ -1.25
SYNE2-206ENST00000441438 IGLV5-37A0A075B6J1 123 aa7.25□□□□□ -1.25
SYNE2-206ENST00000441438 LINC01546A6NGU7 62 aa7.25□□□□□ -1.25
SYNE2-206ENST00000441438 IGLV2-23P01705 113 aa7.25□□□□□ -1.25
SYNE2-206ENST00000441438 COX6B1P14854 86 aa7.25□□□□□ -1.25
SYNE2-206ENST00000441438 Q5VV11 94 aa7.25□□□□□ -1.25
SYNE2-206ENST00000441438 Q86TA4 180 aa7.25□□□□□ -1.25
SYNE2-206ENST00000441438 LINC00476Q8WZB0 136 aa7.25□□□□□ -1.25
SYNE2-206ENST00000441438 SETXQ7Z333 2677 aaKnown RBP7.25□□□□□ -1.25
SYNE2-206ENST00000441438 ZNF137PP52743 207 aa7.25□□□□□ -1.25
SYNE2-206ENST00000441438 Q6ZSN1 163 aa7.25□□□□□ -1.25
SYNE2-206ENST00000441438 SDHAF1A6NFY7 115 aa7.24□□□□□ -1.25
SYNE2-206ENST00000441438 PRR4Q16378 134 aa7.24□□□□□ -1.25
SYNE2-206ENST00000441438 XAGE1AQ9HD64 81 aa7.24□□□□□ -1.25
SYNE2-206ENST00000441438 IGLV2-11P01706 119 aa7.24□□□□□ -1.25
SYNE2-206ENST00000441438 USP9YO00507 2555 aaPredicted RBP7.24□□□□□ -1.25
SYNE2-206ENST00000441438 LYPD2Q6UXB3 125 aa7.24□□□□□ -1.25
SYNE2-206ENST00000441438 ZNF414Q96IQ9 312 aa7.24□□□□□ -1.25
SYNE2-206ENST00000441438 TMEM14CQ9P0S9 112 aa7.24□□□□□ -1.25
SYNE2-206ENST00000441438 LY6HO94772 140 aa7.23□□□□□ -1.25
SYNE2-206ENST00000441438 LUZP6Q538Z0 58 aa7.23□□□□□ -1.25
SYNE2-206ENST00000441438 C1orf134Q5TEV5 83 aa7.23□□□□□ -1.25
SYNE2-206ENST00000441438 GAFA1Q96PS6 74 aa7.23□□□□□ -1.25
SYNE2-206ENST00000441438 UTP20O75691 2785 aaKnown RBP7.23□□□□□ -1.25
SYNE2-206ENST00000441438 CELSR2Q9HCU4 2923 aa7.23□□□□□ -1.25
SYNE2-206ENST00000441438 USP9XQ93008 2570 aaPredicted RBP7.23□□□□□ -1.25
SYNE2-206ENST00000441438 CSPG4Q6UVK1 2322 aa7.23□□□□□ -1.25
SYNE2-206ENST00000441438 CSMD2Q7Z408 3487 aa7.23□□□□□ -1.25
SYNE2-206ENST00000441438 OCR1Q9BZK8 76 aa7.23□□□□□ -1.25
SYNE2-206ENST00000441438 CYP4F30PQ9H0H9 118 aa7.23□□□□□ -1.25
SYNE2-206ENST00000441438 HCP5Q6MZN7 132 aa7.22□□□□□ -1.25
SYNE2-206ENST00000441438 DHRS4-AS1Q9P1J3 65 aa7.22□□□□□ -1.25
SYNE2-206ENST00000441438 FLNCQ14315 2725 aa7.22□□□□□ -1.25
SYNE2-206ENST00000441438 IGHV3OR16-10A0A075B7F0 116 aa7.22□□□□□ -1.25
SYNE2-206ENST00000441438 ARMS2P0C7Q2 107 aa7.22□□□□□ -1.25
SYNE2-206ENST00000441438 ROMO1P60602 79 aa7.22□□□□□ -1.25
SYNE2-206ENST00000441438 TMEM167AQ8TBQ9 72 aa7.22□□□□□ -1.25
SYNE2-206ENST00000441438 CDC42SE1Q9NRR8 79 aa7.22□□□□□ -1.25
SYNE2-206ENST00000441438 LRRK2Q5S007 2527 aa7.22□□□□□ -1.25
SYNE2-206ENST00000441438 A0A0J9YXY3 114 aa7.21□□□□□ -1.25
SYNE2-206ENST00000441438 hDV103S1A0JD37 113 aa7.21□□□□□ -1.25
SYNE2-206ENST00000441438 LHBP01229 141 aa7.21□□□□□ -1.25
SYNE2-206ENST00000441438 ZNF833PQ6ZTB9 187 aa7.21□□□□□ -1.25
SYNE2-206ENST00000441438 DYNAPQ8N1N2 210 aa7.21□□□□□ -1.25
SYNE2-206ENST00000441438 POLQO75417 2590 aa7.21□□□□□ -1.25
SYNE2-206ENST00000441438 HECTD1Q9ULT8 2610 aa7.21□□□□□ -1.25
SYNE2-206ENST00000441438 IGHV3-11P01762 117 aa7.21□□□□□ -1.26
SYNE2-206ENST00000441438 FXYD7P58549 80 aa7.21□□□□□ -1.26
SYNE2-206ENST00000441438 CREBBPQ92793 2442 aa7.21□□□□□ -1.26
SYNE2-206ENST00000441438 RPL36AP83881 106 aaKnown RBP7.2□□□□□ -1.26
SYNE2-206ENST00000441438 WT1-ASQ06250 92 aa7.2□□□□□ -1.26
SYNE2-206ENST00000441438 LYPD1Q8N2G4 141 aa7.2□□□□□ -1.26
SYNE2-206ENST00000441438 IGHV3-35A0A0C4DH35 117 aa7.19□□□□□ -1.26
SYNE2-206ENST00000441438 A6NED7 52 aa7.19□□□□□ -1.26
SYNE2-206ENST00000441438 RPL28P46779 137 aaKnown RBP7.19□□□□□ -1.26
SYNE2-206ENST00000441438 MOBPQ13875 183 aa7.19□□□□□ -1.26
SYNE2-206ENST00000441438 MRPL36Q9P0J6 103 aaKnown RBP7.19□□□□□ -1.26
SYNE2-206ENST00000441438 S4R3C0 116 aa7.19□□□□□ -1.26
SYNE2-206ENST00000441438 FCER1GP30273 86 aa7.19□□□□□ -1.26
SYNE2-206ENST00000441438 D6R8Y8 96 aa7.19□□□□□ -1.26
SYNE2-206ENST00000441438 LINC01560Q8TB33 94 aa7.19□□□□□ -1.26
SYNE2-206ENST00000441438 IGHV3-30-3P0DP02 117 aa7.18□□□□□ -1.26
SYNE2-206ENST00000441438 CASC10Q5T4H9 136 aa7.18□□□□□ -1.26
SYNE2-206ENST00000441438 C9orf66Q5T8R8 295 aa7.18□□□□□ -1.26
SYNE2-206ENST00000441438 TLN2Q9Y4G6 2542 aa7.18□□□□□ -1.26
SYNE2-206ENST00000441438 IGHV4-4A0A075B6R2 117 aa7.18□□□□□ -1.26
SYNE2-206ENST00000441438 KRTAP23-1A1A580 65 aa7.18□□□□□ -1.26
SYNE2-206ENST00000441438 A0A087WVE0 104 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms