RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 IGLV4-69A0A075B6H9 119 aa8.43□□□□□ -1.06
LINC00399-201ENST00000439008 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.43□□□□□ -1.06
LINC00399-201ENST00000439008 LINC01546A6NGU7 62 aa8.43□□□□□ -1.06
LINC00399-201ENST00000439008 FAM229AH3BQW9 127 aa8.43□□□□□ -1.06
LINC00399-201ENST00000439008 INAFM2P0DMQ5 153 aa8.43□□□□□ -1.06
LINC00399-201ENST00000439008 FABP9Q0Z7S8 132 aa8.43□□□□□ -1.06
LINC00399-201ENST00000439008 ORMDL2Q53FV1 153 aa8.43□□□□□ -1.06
LINC00399-201ENST00000439008 LINC00242Q5T6M2 205 aa8.43□□□□□ -1.06
LINC00399-201ENST00000439008 TMEM141Q96I45 108 aa8.43□□□□□ -1.06
LINC00399-201ENST00000439008 AMELXQ99217 191 aa8.43□□□□□ -1.06
LINC00399-201ENST00000439008 CYSLTR1Q9Y271 337 aa8.43□□□□□ -1.06
LINC00399-201ENST00000439008 SNAPINO95295 136 aa8.42□□□□□ -1.06
LINC00399-201ENST00000439008 UBE2D1P51668 147 aa8.42□□□□□ -1.06
LINC00399-201ENST00000439008 Q6ZRU5 148 aa8.42□□□□□ -1.06
LINC00399-201ENST00000439008 SVBPQ8N300 66 aa8.42□□□□□ -1.06
LINC00399-201ENST00000439008 SPACA4Q8TDM5 124 aa8.42□□□□□ -1.06
LINC00399-201ENST00000439008 URB1-AS1Q96HZ7 61 aa8.42□□□□□ -1.06
LINC00399-201ENST00000439008 A0A087WYN8 130 aa8.41□□□□□ -1.06
LINC00399-201ENST00000439008 A0A096LNI7 61 aa8.41□□□□□ -1.06
LINC00399-201ENST00000439008 K7EMI3 77 aa8.41□□□□□ -1.06
LINC00399-201ENST00000439008 MT-ND6P03923 174 aa8.41□□□□□ -1.06
LINC00399-201ENST00000439008 TOMM6Q96B49 74 aa8.41□□□□□ -1.06
LINC00399-201ENST00000439008 ZNF561-AS1K7EIQ3 104 aa8.4□□□□□ -1.06
LINC00399-201ENST00000439008 MALP21145 153 aa8.4□□□□□ -1.06
LINC00399-201ENST00000439008 SYCNQ0VAF6 134 aa8.4□□□□□ -1.06
LINC00399-201ENST00000439008 COX19Q49B96 90 aa8.4□□□□□ -1.06
LINC00399-201ENST00000439008 CARD19Q96LW7 228 aa8.4□□□□□ -1.06
LINC00399-201ENST00000439008 A0A096LNJ9 63 aa8.39□□□□□ -1.07
LINC00399-201ENST00000439008 IGKV2-24A0A0C4DH68 120 aa8.39□□□□□ -1.07
LINC00399-201ENST00000439008 KIAA0087Q14695 138 aa8.39□□□□□ -1.07
LINC00399-201ENST00000439008 NDUFA5Q16718 116 aa8.39□□□□□ -1.07
LINC00399-201ENST00000439008 C10orf25Q5T742 122 aa8.39□□□□□ -1.07
LINC00399-201ENST00000439008 TEX43Q6ZNM6 134 aa8.39□□□□□ -1.07
LINC00399-201ENST00000439008 TRAPPC1Q9Y5R8 145 aa8.39□□□□□ -1.07
LINC00399-201ENST00000439008 A0A087WZ39 114 aa8.38□□□□□ -1.07
LINC00399-201ENST00000439008 A0A0J9YXV3 536 aa8.38□□□□□ -1.07
LINC00399-201ENST00000439008 SPAG11BQ08648 103 aa8.38□□□□□ -1.07
LINC00399-201ENST00000439008 CBLN2Q8IUK8 224 aa8.38□□□□□ -1.07
LINC00399-201ENST00000439008 C18orf32Q8TCD1 76 aa8.38□□□□□ -1.07
LINC00399-201ENST00000439008 ORAOV1Q8WV07 137 aa8.38□□□□□ -1.07
LINC00399-201ENST00000439008 PLAC8Q9NZF1 115 aa8.38□□□□□ -1.07
LINC00399-201ENST00000439008 DMBT1Q9UGM3 2413 aaPredicted RBP8.37□□□□□ -1.07
LINC00399-201ENST00000439008 HNRNPA3P51991 378 aaKnown RBP8.37□□□□□ -1.07
LINC00399-201ENST00000439008 C2orf48Q96LS8 159 aa8.37□□□□□ -1.07
LINC00399-201ENST00000439008 TIMM17AQ99595 171 aa8.37□□□□□ -1.07
LINC00399-201ENST00000439008 VCX2Q9H322 139 aa8.37□□□□□ -1.07
LINC00399-201ENST00000439008 LRP1Q07954 4544 aaKnown RBP8.37□□□□□ -1.07
LINC00399-201ENST00000439008 PLA2G1BP04054 148 aaKnown RBP8.36□□□□□ -1.07
LINC00399-201ENST00000439008 NPSP0C0P6 89 aa8.36□□□□□ -1.07
LINC00399-201ENST00000439008 MAJINQ3KP22 176 aa8.36□□□□□ -1.07
LINC00399-201ENST00000439008 ERASQ7Z444 233 aa8.36□□□□□ -1.07
LINC00399-201ENST00000439008 FAM19A3Q7Z5A8 133 aa8.36□□□□□ -1.07
LINC00399-201ENST00000439008 OR10D4PQ8NGN7 298 aa8.36□□□□□ -1.07
LINC00399-201ENST00000439008 SCGB3A1Q96QR1 104 aa8.36□□□□□ -1.07
LINC00399-201ENST00000439008 CAMK2N2Q96S95 79 aa8.36□□□□□ -1.07
LINC00399-201ENST00000439008 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.35□□□□□ -1.07
LINC00399-201ENST00000439008 APOMO95445 188 aa8.35□□□□□ -1.07
LINC00399-201ENST00000439008 UNQ6190/PRO20217Q6UXQ8 127 aa8.35□□□□□ -1.07
LINC00399-201ENST00000439008 Q6ZN92 141 aa8.35□□□□□ -1.07
LINC00399-201ENST00000439008 FA2HQ7L5A8 372 aa8.35□□□□□ -1.07
LINC00399-201ENST00000439008 DPH3Q96FX2 82 aa8.35□□□□□ -1.07
LINC00399-201ENST00000439008 PMCHL1Q16048 86 aa8.34□□□□□ -1.07
LINC00399-201ENST00000439008 LCE2DQ5TA82 110 aaPredicted RBP8.34□□□□□ -1.07
LINC00399-201ENST00000439008 C2orf82Q6UX34 121 aa8.34□□□□□ -1.07
LINC00399-201ENST00000439008 STPG4Q8N801 248 aa8.34□□□□□ -1.07
LINC00399-201ENST00000439008 C2orf88Q9BSF0 95 aa8.34□□□□□ -1.07
LINC00399-201ENST00000439008 CDKN2A-AS1Q9UH64 79 aa8.34□□□□□ -1.07
LINC00399-201ENST00000439008 PKHD1L1Q86WI1 4243 aa8.34□□□□□ -1.07
LINC00399-201ENST00000439008 PTTG1IPP53801 180 aa8.33□□□□□ -1.08
LINC00399-201ENST00000439008 RPL37AP61513 92 aaKnown RBP8.33□□□□□ -1.08
LINC00399-201ENST00000439008 C6orf48Q9UBA6 75 aa8.33□□□□□ -1.08
LINC00399-201ENST00000439008 HERC1Q15751 4861 aa8.32□□□□□ -1.08
LINC00399-201ENST00000439008 A0A1W2PNN7 141 aa8.32□□□□□ -1.08
LINC00399-201ENST00000439008 LINC00614P0C842 121 aa8.32□□□□□ -1.08
LINC00399-201ENST00000439008 G0S2P27469 103 aa8.32□□□□□ -1.08
LINC00399-201ENST00000439008 GAGE2BQ13066 116 aa8.32□□□□□ -1.08
LINC00399-201ENST00000439008 CST9LQ9H4G1 147 aa8.32□□□□□ -1.08
LINC00399-201ENST00000439008 MRPL35Q9NZE8 188 aaKnown RBP8.32□□□□□ -1.08
LINC00399-201ENST00000439008 LOC107984640A0A0U1RRK4 108 aa8.31□□□□□ -1.08
LINC00399-201ENST00000439008 RNF151Q2KHN1 245 aa8.31□□□□□ -1.08
LINC00399-201ENST00000439008 LINC01561Q8N1V8 128 aa8.31□□□□□ -1.08
LINC00399-201ENST00000439008 SMCO4Q9NRQ5 59 aa8.31□□□□□ -1.08
LINC00399-201ENST00000439008 C9orf116Q5BN46 136 aaPredicted RBP8.3□□□□□ -1.08
LINC00399-201ENST00000439008 FAT3Q8TDW7 4589 aa8.29□□□□□ -1.08
LINC00399-201ENST00000439008 NDUFA1O15239 70 aa8.29□□□□□ -1.08
LINC00399-201ENST00000439008 RPL18AQ02543 176 aaKnown RBP8.29□□□□□ -1.08
LINC00399-201ENST00000439008 PDZD11Q5EBL8 140 aa8.29□□□□□ -1.08
LINC00399-201ENST00000439008 PAPPA-AS1Q5QFB9 102 aa8.29□□□□□ -1.08
LINC00399-201ENST00000439008 Q6ZRP5 223 aa8.29□□□□□ -1.08
LINC00399-201ENST00000439008 IGLV5-45A0A087WSX0 123 aa8.28□□□□□ -1.08
LINC00399-201ENST00000439008 TINCRA0A1B0GVN0 87 aa8.28□□□□□ -1.08
LINC00399-201ENST00000439008 F8WDY8 70 aa8.28□□□□□ -1.08
LINC00399-201ENST00000439008 HERVK_113P63121 156 aa8.28□□□□□ -1.08
LINC00399-201ENST00000439008 PMVKQ15126 192 aa8.28□□□□□ -1.08
LINC00399-201ENST00000439008 KRTAP7-1Q8IUC3 87 aa8.28□□□□□ -1.08
LINC00399-201ENST00000439008 FAM168BA1KXE4 195 aa8.27□□□□□ -1.09
LINC00399-201ENST00000439008 LINC01549A6NIU2 74 aa8.27□□□□□ -1.09
LINC00399-201ENST00000439008 COLCA2A8K830 154 aa8.27□□□□□ -1.09
LINC00399-201ENST00000439008 SMIM1B2RUZ4 78 aa8.27□□□□□ -1.09
LINC00399-201ENST00000439008 HBDP02042 147 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms