RNA–Protein interactions for RNA: ENST00000433709.6

HDAC9-213, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-213ENST00000433709 NTM-AS1Q6ZSK4 140 aa3.5□□□□□ -1.85
HDAC9-213ENST00000433709 DPH3Q96FX2 82 aa3.5□□□□□ -1.85
HDAC9-213ENST00000433709 LINC00474Q9P2X8 69 aa3.5□□□□□ -1.85
HDAC9-213ENST00000433709 KMT2AQ03164 3969 aa3.5□□□□□ -1.85
HDAC9-213ENST00000433709 TRBV20OR9-2A0A075B6H5 130 aa3.49□□□□□ -1.85
HDAC9-213ENST00000433709 IGHV3-64A0A075B6Q5 118 aa3.49□□□□□ -1.85
HDAC9-213ENST00000433709 TRBV6-5A0A0K0K1A5 114 aa3.49□□□□□ -1.85
HDAC9-213ENST00000433709 A0A1B0GUT8 65 aa3.49□□□□□ -1.85
HDAC9-213ENST00000433709 ZNF727A8MUV8 499 aa3.49□□□□□ -1.85
HDAC9-213ENST00000433709 PPP1R2P9O14990 202 aa3.49□□□□□ -1.85
HDAC9-213ENST00000433709 OXTP01178 125 aa3.49□□□□□ -1.85
HDAC9-213ENST00000433709 APCSP02743 223 aa3.49□□□□□ -1.85
HDAC9-213ENST00000433709 PMCHP20382 165 aa3.49□□□□□ -1.85
HDAC9-213ENST00000433709 CNBPP62633 177 aaKnown RBP3.49□□□□□ -1.85
HDAC9-213ENST00000433709 LYPD6BQ8NI32 183 aa3.49□□□□□ -1.85
HDAC9-213ENST00000433709 TSKUQ8WUA8 353 aa3.49□□□□□ -1.85
HDAC9-213ENST00000433709 MRAP2Q96G30 205 aa3.49□□□□□ -1.85
HDAC9-213ENST00000433709 SMIM7Q9BQ49 75 aa3.49□□□□□ -1.85
HDAC9-213ENST00000433709 ST20Q9HBF5 79 aa3.49□□□□□ -1.85
HDAC9-213ENST00000433709 OSTCQ9NRP0 149 aa3.49□□□□□ -1.85
HDAC9-213ENST00000433709 HYDINQ4G0P3 5121 aa3.49□□□□□ -1.85
HDAC9-213ENST00000433709 LINC00862A6NCI5 91 aa3.48□□□□□ -1.85
HDAC9-213ENST00000433709 SDHAF1A6NFY7 115 aa3.48□□□□□ -1.85
HDAC9-213ENST00000433709 FUSP35637 526 aaKnown RBP eCLIP3.48□□□□□ -1.85
HDAC9-213ENST00000433709 CEBPGP53567 150 aa3.48□□□□□ -1.85
HDAC9-213ENST00000433709 PEA15Q15121 130 aa3.48□□□□□ -1.85
HDAC9-213ENST00000433709 SS18Q15532 418 aa3.48□□□□□ -1.85
HDAC9-213ENST00000433709 TMEM241Q24JQ0 296 aa3.48□□□□□ -1.85
HDAC9-213ENST00000433709 RNASEKQ6P5S7 137 aaKnown RBP3.48□□□□□ -1.85
HDAC9-213ENST00000433709 ALKAL2Q6UX46 152 aa3.48□□□□□ -1.85
HDAC9-213ENST00000433709 SCXQ7RTU7 201 aa3.48□□□□□ -1.85
HDAC9-213ENST00000433709 C20orf203Q8NBC4 194 aa3.48□□□□□ -1.85
HDAC9-213ENST00000433709 OR5A1Q8NGJ0 315 aa3.48□□□□□ -1.85
HDAC9-213ENST00000433709 C7orf33Q8WU49 177 aa3.48□□□□□ -1.85
HDAC9-213ENST00000433709 ISOC2Q96AB3 205 aa3.48□□□□□ -1.85
HDAC9-213ENST00000433709 TMEM191AQ9H0A3 160 aa3.48□□□□□ -1.85
HDAC9-213ENST00000433709 RNASE7Q9H1E1 156 aaKnown RBP3.48□□□□□ -1.85
HDAC9-213ENST00000433709 NAT8BQ9UHF3 227 aa3.48□□□□□ -1.85
HDAC9-213ENST00000433709 PLECQ15149 4684 aaKnown RBP3.47□□□□□ -1.85
HDAC9-213ENST00000433709 IGLV10-54A0A075B6I4 117 aa3.47□□□□□ -1.85
HDAC9-213ENST00000433709 HIGD1CA8MV81 97 aa3.47□□□□□ -1.85
HDAC9-213ENST00000433709 F8W036 122 aa3.47□□□□□ -1.85
HDAC9-213ENST00000433709 FCER1GP30273 86 aa3.47□□□□□ -1.85
HDAC9-213ENST00000433709 RPS10P46783 165 aaKnown RBP3.47□□□□□ -1.85
HDAC9-213ENST00000433709 RPL37AP61513 92 aaKnown RBP3.47□□□□□ -1.85
HDAC9-213ENST00000433709 WFDC2Q14508 124 aa3.47□□□□□ -1.85
HDAC9-213ENST00000433709 ERASQ7Z444 233 aa3.47□□□□□ -1.85
HDAC9-213ENST00000433709 GATD1Q8NB37 220 aa3.47□□□□□ -1.85
HDAC9-213ENST00000433709 CIRBP-AS1Q8TBR5 109 aa3.47□□□□□ -1.85
HDAC9-213ENST00000433709 CSDC2Q9Y534 153 aaKnown RBP3.47□□□□□ -1.85
HDAC9-213ENST00000433709 IGHV1-58A0A0C4DH39 117 aa3.46□□□□□ -1.86
HDAC9-213ENST00000433709 TRBV27A0A0K0K1C4 114 aa3.46□□□□□ -1.86
HDAC9-213ENST00000433709 C7orf77A4D0Y5 90 aa3.46□□□□□ -1.86
HDAC9-213ENST00000433709 C1orf196B1AJZ1 125 aa3.46□□□□□ -1.86
HDAC9-213ENST00000433709 F8WDY8 70 aa3.46□□□□□ -1.86
HDAC9-213ENST00000433709 K7EN84 100 aa3.46□□□□□ -1.86
HDAC9-213ENST00000433709 APOMO95445 188 aa3.46□□□□□ -1.86
HDAC9-213ENST00000433709 PPBPP02775 128 aa3.46□□□□□ -1.86
HDAC9-213ENST00000433709 FGF6P10767 208 aa3.46□□□□□ -1.86
HDAC9-213ENST00000433709 CLPSL2Q6UWE3 100 aa3.46□□□□□ -1.86
HDAC9-213ENST00000433709 SDIM1Q6ZPB5 146 aa3.46□□□□□ -1.86
HDAC9-213ENST00000433709 MRPL52Q86TS9 123 aaKnown RBP3.46□□□□□ -1.86
HDAC9-213ENST00000433709 LINC01551Q86U37 167 aa3.46□□□□□ -1.86
HDAC9-213ENST00000433709 C20orf78Q9BR46 151 aa3.46□□□□□ -1.86
HDAC9-213ENST00000433709 NAT8Q9UHE5 227 aa3.46□□□□□ -1.86
HDAC9-213ENST00000433709 IGLV4-60A0A075B6I1 120 aa3.45□□□□□ -1.86
HDAC9-213ENST00000433709 GVQW2A0A096LPI5 108 aaPredicted RBP3.45□□□□□ -1.86
HDAC9-213ENST00000433709 G0S2P27469 103 aa3.45□□□□□ -1.86
HDAC9-213ENST00000433709 CIRBPQ14011 172 aaKnown RBP3.45□□□□□ -1.86
HDAC9-213ENST00000433709 KRTAP26-1Q6PEX3 210 aa3.45□□□□□ -1.86
HDAC9-213ENST00000433709 Q6ZRU5 148 aa3.45□□□□□ -1.86
HDAC9-213ENST00000433709 ZNF664Q8N3J9 261 aa3.45□□□□□ -1.86
HDAC9-213ENST00000433709 CHCHD10Q8WYQ3 142 aaPredicted RBP3.45□□□□□ -1.86
HDAC9-213ENST00000433709 TRAV26-2A0A0B4J265 109 aa3.44□□□□□ -1.86
HDAC9-213ENST00000433709 IGKV3OR2-268A0A0C4DH90 116 aa3.44□□□□□ -1.86
HDAC9-213ENST00000433709 SRP19P09132 144 aaKnown RBP3.44□□□□□ -1.86
HDAC9-213ENST00000433709 ESDP10768 282 aa3.44□□□□□ -1.86
HDAC9-213ENST00000433709 RAB4AP20338 218 aa3.44□□□□□ -1.86
HDAC9-213ENST00000433709 POLR2KP53803 58 aaKnown RBP3.44□□□□□ -1.86
HDAC9-213ENST00000433709 KRTAP10-8P60410 259 aa3.44□□□□□ -1.86
HDAC9-213ENST00000433709 RAB14P61106 215 aa3.44□□□□□ -1.86
HDAC9-213ENST00000433709 LINC01620Q4KN68 170 aa3.44□□□□□ -1.86
HDAC9-213ENST00000433709 LINC01561Q8N1V8 128 aa3.44□□□□□ -1.86
HDAC9-213ENST00000433709 RPL39LQ96EH5 51 aaKnown RBP3.44□□□□□ -1.86
HDAC9-213ENST00000433709 TIMM21Q9BVV7 248 aa3.44□□□□□ -1.86
HDAC9-213ENST00000433709 PPDPFQ9H3Y8 114 aa3.44□□□□□ -1.86
HDAC9-213ENST00000433709 HECTD4Q9Y4D8 3996 aa3.44□□□□□ -1.86
HDAC9-213ENST00000433709 TRBV24-1A0A075B6N3 115 aa3.43□□□□□ -1.86
HDAC9-213ENST00000433709 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.43□□□□□ -1.86
HDAC9-213ENST00000433709 LINC00959A0A1B0GUT2 108 aa3.43□□□□□ -1.86
HDAC9-213ENST00000433709 SMIM27A0A1W2PRY6 76 aa3.43□□□□□ -1.86
HDAC9-213ENST00000433709 IGKV2-29A2NJV5 120 aaPredicted RBP3.43□□□□□ -1.86
HDAC9-213ENST00000433709 RAB5AP20339 215 aa3.43□□□□□ -1.86
HDAC9-213ENST00000433709 CKS2P33552 79 aa3.43□□□□□ -1.86
HDAC9-213ENST00000433709 HBBP68871 147 aa3.43□□□□□ -1.86
HDAC9-213ENST00000433709 HAMPP81172 84 aa3.43□□□□□ -1.86
HDAC9-213ENST00000433709 ADIRFQ15847 76 aa3.43□□□□□ -1.86
HDAC9-213ENST00000433709 FAM104BQ5XKR9 115 aa3.43□□□□□ -1.86
HDAC9-213ENST00000433709 ATP5L2Q7Z4Y8 100 aa3.43□□□□□ -1.86
HDAC9-213ENST00000433709 NUP35Q8NFH5 326 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms